EY665696

Overview
NameEY665696
Unique NameEY665696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665696 vs. ExPASy Swiss-Prot
Match: CHMU_ARATH (Chorismate mutase, chloroplastic OS=Arabidopsis thaliana GN=CM1 PE=2 SV=2)

HSP 1 Score: 286.96 bits (733), Expect = 9.192e-77
Identity = 141/224 (62.95%), Postives = 174/224 (77.68%), Query Frame = 1
Query:   25 DPASADAWADDLLGRXGEXILKETALLHSKLGRYQSPDEHPFFPDQLPDPLVPPMQYPQVLHPIADSININIKVWNMYFRDLIPRLEEEGDDGNCGSAAVCDTMCLQILSKRIHYGKFVAEAKFLADPDAYKAAIEAQDSNKMMEILTYPTVEEAVKQRVLMKATAYGQEV---------TPHDGNGADAVYKINPSLVADLYGDWIMPLTKEVQVAYLLRRMD 669
            DP + D   D   G   E ++K T  LH+K+GR++SPDEHPFFPD LP+P++PP+QYP+VLH  ADSININ K+WNMYFRDL+PRL ++GDDGN GS AVCD +CLQ LSKRIHYGKFVAEAKF A P+AY++AI+AQD + +M++LT+PTVE+A+K+RV MK   YGQEV            +GN +  VYKI+P LV DLYGDWIMPLTKEVQV YLLRR+D
Sbjct:  114 DPTAFDM--DGFNGSLVEYMVKGTEKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDALMDMLTFPTVEDAIKKRVEMKTRTYGQEVKVGMEEKEEEEEEGNESH-VYKISPILVGDLYGDWIMPLTKEVQVEYLLRRLD 334          
BLAST of EY665696 vs. ExPASy Swiss-Prot
Match: CHMU_YEAST (Chorismate mutase OS=Saccharomyces cerevisiae GN=ARO7 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.411e-38
Identity = 81/197 (41.12%), Postives = 121/197 (61.42%), Query Frame = 1
Query:   85 LKETALLHSKLGRYQSPDEHPFFPDQLPDPLVPPMQYPQVLHPIADSININIKVWNMYFRDLIPRLEE-EGDD-GNCGSAAVCDTMCLQILSKRIHYGKFVAEAKFLADPDAYKAAIEAQDSNKMMEILTYPTVEEAVKQRVLMKATAYGQEVTPHDGNGADAVYKINPSLVADLYGDWIMPLTKEVQVAYLLRRMD 669
            L    + HS++ R++SPDE PFFPD++    +P + YPQ+L P A  +N N K+  +Y   +IP + + +GDD  N GS A  D  CLQ LS+RIH+GKFVAEAKF +D   Y   I+++D   +M+ +T   VEE + +R+  KA  YG + T   G       +I P  +  +Y + ++P+TKEV+V YLLRR++
Sbjct:   64 LSNLEIAHSRIRRFESPDETPFFPDKIQKSFLPSINYPQILAPYAPEVNYNDKIKKVYIEKIIPLISKRDGDDKNNFGSVATRDIECLQSLSRRIHFGKFVAEAKFQSDIPLYTKLIKSKDVEGIMKNITNSAVEEKILERLTKKAEVYGVDPTNESGE-----RRITPEYLVKIYKEIVIPITKEVEVEYLLRRLE 255          
BLAST of EY665696 vs. ExPASy Swiss-Prot
Match: CHMU_SCHPO (Probable chorismate mutase OS=Schizosaccharomyces pombe GN=SPAC16E8.04c PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.939e-34
Identity = 80/200 (40.00%), Postives = 121/200 (60.50%), Query Frame = 1
Query:   82 ILKETALLHSKLGRYQSPDEHPFFPDQLPDPLVPPMQYPQVLHPIADSININIKVWNMYFRDLIPRLEEEGDD-GNCGSAAVCDTMCLQILSKRIHYGKFVAEAKFLADPDAYKAAIEAQDSNKMMEILTYPTVEEAVKQRVLMKATAYGQEVT----PHDGNGADAVYKINPSLVADLYGDWIMPLTKEVQVAYLLRRM 666
            +L E   +++ + RY SP+E+PF  D LP+P++P       LHP  +++N+N ++   Y  +++P++   GDD  N GS  VCD  CLQ LS+RIHYGKFVAEAK+LA+P+ YK  I A+D   +   +     EE V +R+  KA  YG++      P D        +IN   VA +Y D+++P+TK+V+V YLL R+
Sbjct:   62 LLHEEEKVYALVRRYASPEEYPF-TDNLPEPILPKFSGKFPLHP--NNVNVNSEILEYYINEIVPKISSPGDDFDNYGSTVVCDIRCLQSLSRRIHYGKFVAEAKYLANPEKYKKLILARDIKGIENEIVDAAQEERVLKRLHYKALNYGRDAADPTKPSD--------RINADCVASIYKDYVIPMTKKVEVDYLLARL 250          
The following BLAST results are available for this feature:
BLAST of EY665696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CHMU_ARATH9.192e-7762.95Chorismate mutase, chloroplastic OS=Arabidopsis th... [more]
CHMU_YEAST8.411e-3841.12Chorismate mutase OS=Saccharomyces cerevisiae GN=A... [more]
CHMU_SCHPO1.939e-3440.00Probable chorismate mutase OS=Schizosaccharomyces ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665696 ID=EY665696; Name=EY665696; organism=Citrus sinensis; type=EST; length=839bp
GCAGTACGGTCCGGATTCCGGGTCGACCCCGCGTCCGCGGACGCGTGGGC
GGACGACCTTCTAGGACGCGNGGGGGAGNACATACTTAAAGAAACTGCCT
TACTTCACTCCAAGTTGGGCCGATACCAAAGCCCGGATGAGCATCCATTC
TTTCCTGATCAACTGCCTGACCCATTGGTGCCACCTATGCAGTACCCACA
GGTACTCCATCCCATAGCTGATTCAATCAATATAAATATTAAAGTTTGGA
ACATGTATTTCAGAGATCTCATCCCAAGATTAGAAGAGGAAGGAGATGAT
GGCAATTGTGGATCAGCTGCTGTTTGTGATACAATGTGCTTGCAGATTTT
GTCCAAGAGAATACATTATGGTAAATTTGTAGCGGAAGCAAAATTTCTAG
CAGATCCAGATGCATATAAAGCTGCCATTGAGGCACAGGACAGCAATAAG
ATGATGGAAATTCTGACATACCCAACAGTAGAGGAGGCGGTCAAACAAAG
AGTATTGATGAAAGCCACAGCTTATGGTCAAGAAGTTACACCCCATGATG
GAAACGGAGCTGATGCCGTTTACAAAATAAACCCAAGCTTGGTGGCAGAT
CTGTATGGGGACTGGATAATGCCATTAACAAAGGAAGTCCAAGTCGCTTA
CTTATTGAGAAGGATGGATTGAATAAATCTGAGCCTGCATGTTACAGAGG
AGAAAGGAGAGAGCCTTATACGATACGTAACACCGGTGCTTCGGTTGATG
AATTGGGGGGACCATATTAATGAATTATCAGATGAATTTGGCCCTTTCGG
CCCTTACAACGTTCCCAGGATGGAAAGGGAAACCCGGGG
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