EY665694

Overview
NameEY665694
Unique NameEY665694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11317 contig Csv1_Contig11317:29..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665694 vs. ExPASy Swiss-Prot
Match: CP74A_ARATH (Allene oxide synthase, chloroplastic OS=Arabidopsis thaliana GN=CYP74A PE=1 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 3.207e-40
Identity = 84/178 (47.19%), Postives = 113/178 (63.48%), Query Frame = 3
Query:  153 RTIPGSYGWPLLGPISDRLDYFWFQGPETFFRKRIEKHKSTVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCVFNFLSKSIVGSGP 686
            R IPG+YG P++GPI DR DYF+ QG E FF+ RI K+ STV+R N+PP    F+  NP V+A+LD KSF  LFD++ VEKK++  G +MPS + TGG R+ +YLD SEPKH +LK      LK S      E  ++   LFD++EKELS K    +        FNFL+++  G+ P
Sbjct:   55 RNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPG--AFIAENPQVVALLDGKSFPVLFDVDKVEKKDLFTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSRNRIFPEFQATYSELFDSLEKELSLKGKADFGGSSDGTAFNFLARAFYGTNP 230          
BLAST of EY665694 vs. ExPASy Swiss-Prot
Match: CP74_LINUS (Allene oxide synthase, chloroplastic OS=Linum usitatissimum GN=CYP74A PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.188e-40
Identity = 83/178 (46.63%), Postives = 112/178 (62.92%), Query Frame = 3
Query:  153 RTIPGSYGWPLLGPISDRLDYFWFQGPETFFRKRIEKHKSTVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCVFNFLSKSIVGSGP 686
            R IPG YG P +GPI DRLDYF+ QG E FF+ R++K+KSTV+R N+PP    F+  NP VI +LD KSF  LFDM  VEKK++  G +MPS + TGG R+ +YLD SEP H +LK    + +K      + E  SS   L + VE +L+ K   ++  P ++  FNFLS++  G  P
Sbjct:   73 RQIPGDYGLPGIGPIQDRLDYFYNQGREEFFKSRLQKYKSTVYRANMPPG--PFIASNPRVIVLLDAKSFPVLFDMSKVEKKDLFTGTYMPSTELTGGYRILSYLDPSEPNHTKLKQLLFNLIKNRRDYVIPEFSSSFTDLCEVVEYDLATKGKAAFNDPAEQAAFNFLSRAFFGVKP 248          
BLAST of EY665694 vs. ExPASy Swiss-Prot
Match: C74A2_PARAR (Allene oxide synthase OS=Parthenium argentatum GN=CYP74A2 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.151e-36
Identity = 80/181 (44.20%), Postives = 114/181 (62.98%), Query Frame = 3
Query:  153 RTIPGSYGWPLLGPISDRLDYFWFQGP-ETFFRKRIEKHKSTVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCVFNFLSKSIVGSGPKK 692
            R IPGSYG P   PI DRL+YF+  G  + +FR R++K++STVFR N+PP    F++ NP VI +LD KSF  LFD+  VEKK++  G +MPS K TGG RV +YLD SEP+HAQLK      LK SS   + +  ++   LF+ +E EL++    ++    ++  F FL ++   S P++
Sbjct:    9 REIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPG--PFVSSNPKVIVLLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQLKNLLFFMLKNSSNRVIPQFETTYTELFEGLEAELAKNGKAAFNDVGEQAAFRFLGRAYFNSNPEE 187          
BLAST of EY665694 vs. ExPASy Swiss-Prot
Match: C74A2_ORYSJ (Allene oxide synthase 2 OS=Oryza sativa subsp. japonica GN=CYP74A2 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 7.160e-32
Identity = 73/179 (40.78%), Postives = 102/179 (56.98%), Query Frame = 3
Query:  153 RTIPGSYGWPLLGPISDRLDYFWFQGPETFFRKRIEKHKSTVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCV-FNFLSKSIVGSGP 686
            R +PGSYG P +  + DRLD+++ QG + +F  R E++ STV R N+PP    F+  +P V+A+LD KSF  LFD+  VEK+++  G FMPS   TGG RV AYLD SEP HA++K   +  L      +V    S+   L DTVE +L+     S    L     F F+ ++  G  P
Sbjct:   10 RPVPGSYGVPFVSAVRDRLDFYYLQGQDKYFESRAERYGSTVVRINVPPG--PFMARDPRVVALLDAKSFPVLFDVAKVEKRDVFTGTFMPSTSLTGGYRVCAYLDPSEPNHAKIKQLLLSLLVSRKDAFVPVFRSNFGALLDTVESQLASGGGKSDFTALNDATSFEFIGEAYFGVRP 186          
BLAST of EY665694 vs. ExPASy Swiss-Prot
Match: C74A1_ORYSJ (Allene oxide synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CYP74A1 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.193e-28
Identity = 69/181 (38.12%), Postives = 97/181 (53.59%), Query Frame = 3
Query:  153 RTIPGSYGWPLLGPISDRLDYFWFQGP-ETFFRKRIEKHKSTVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCVFNFLSKSIVGSGPKK 692
            R +PG YG P++G I DR +YF+  G  + FF  R+  H+STV R N+PP    F+  +P V+A+LD  SF  LFD  +V+K ++  G FMPS   TGG RV +YLD SEP HA LK      L    +  + +       LF  +E +L+      + V      F FL + ++G  P K
Sbjct:   48 RKVPGDYGPPVVGAIRDRYEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPG--PFVARDPRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTDLTGGYRVLSYLDPSEPNHAPLKTLLFYLLSHRRQQVIPKFREVYGDLFGLMENDLARVGKADFGVHNDAAAFGFLCQGLLGRDPAK 226          
BLAST of EY665694 vs. ExPASy Swiss-Prot
Match: C74A4_ORYSJ (Allene oxide synthase 4 OS=Oryza sativa subsp. japonica GN=CYP74A4 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.442e-26
Identity = 65/179 (36.31%), Postives = 98/179 (54.75%), Query Frame = 3
Query:  153 RTIPGSYGWPLLGPISDRLDYFWFQGPETFFRKRIEKHK-STVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCVFNFLSKSIVGSGP 686
            R IPG YG P L P+ DRLDY++FQG + FFR R+ +H  +TV R N+PP    FL  +P V+A+LD +SF  L D  +V+K + L G FMPS+   GG R  A+LD ++P+HA++K   M               ++   +FD V+  L     + +     + + +F   ++ G  P
Sbjct:   30 REIPGGYGVPFLSPLRDRLDYYYFQGADEFFRSRVARHGGATVLRVNMPPG--PFLAGDPRVVALLDARSFRVLLDDSMVDKADTLDGTFMPSLALFGGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHVAPAFRAAFAAMFDEVDAGLVAGGPVEFNKLNMRYMLDFTCAALFGGAP 206          
BLAST of EY665694 vs. ExPASy Swiss-Prot
Match: C74A3_ORYSJ (Allene oxide synthase 3 OS=Oryza sativa subsp. japonica GN=CYP74A3 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.231e-25
Identity = 65/179 (36.31%), Postives = 98/179 (54.75%), Query Frame = 3
Query:  153 RTIPGSYGWPLLGPISDRLDYFWFQGPETFFRKRIEKHK-STVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSISYMVPLQKCVFNFLSKSIVGSGP 686
            R IPG YG P   P+ DRLDYF+FQG E +FR R+ +H  +TV R N+PP    F++ NP V+A+LD +SF  L D  +V+K + L G +MPS    GG R  A+LD ++P+HA++K   M               ++   +FD VE  L    ++ +     + + +F   ++ G  P
Sbjct:   30 REIPGGYGVPFFSPLRDRLDYFYFQGAEEYFRSRVARHGGATVLRVNMPPG--PFISGNPRVVALLDARSFRVLLDDSMVDKADTLDGTYMPSRALFGGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHVAPAFRAAFAAMFDAVEAGLGA--AVEFNKLNMRYMLDFTCAALFGGEP 204          
The following BLAST results are available for this feature:
BLAST of EY665694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CP74A_ARATH3.207e-4047.19Allene oxide synthase, chloroplastic OS=Arabidopsi... [more]
CP74_LINUS4.188e-4046.63Allene oxide synthase, chloroplastic OS=Linum usit... [more]
C74A2_PARAR2.151e-3644.20Allene oxide synthase OS=Parthenium argentatum GN=... [more]
C74A2_ORYSJ7.160e-3240.78Allene oxide synthase 2 OS=Oryza sativa subsp. jap... [more]
C74A1_ORYSJ8.193e-2838.12Allene oxide synthase 1, chloroplastic OS=Oryza sa... [more]
C74A4_ORYSJ3.442e-2636.31Allene oxide synthase 4 OS=Oryza sativa subsp. jap... [more]
C74A3_ORYSJ2.231e-2536.31Allene oxide synthase 3 OS=Oryza sativa subsp. jap... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-E09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665694 ID=EY665694; Name=EY665694; organism=Citrus sinensis; type=EST; length=864bp
AGATAACACACCAATCCACGTTCAATATGAATGCCTCCATGATGATGATA
AACTCAATGAGCGTATCACCAGACATGCCCTCATCATCGCCCTTCCAGTC
ACAGTCGCTCTCCACACCCACTTCATCACCACCGTCCACGTCGCTCCCGC
TCCGAACAATCCCCGGATCCTACGGCTGGCCCCTTCTGGGCCCCATCTCC
GACCGCCTCGACTATTTCTGGTTCCAGGGTCCTGAAACTTTCTTCAGAAA
ACGCATTGAAAAGCACAAGAGCACGGTGTTCCGTACAAACATACCACCCA
CGTGGCCTTTGTTTCTCAACGTAAACCCCAATGTCATTGCTGTTCTTGAC
TGCAAATCTTTTGCTCATCTCTTTGATATGGAGATTGTGGAGAAGAAAAA
TATTCTTGTTGGTGATTTCATGCCCAGTGTTAAGTTTACAGGAGGCTTGA
GGGTTAGTGCTTATCTTGATACTTCTGAGCCTAAACATGCCCAGCTCAAA
GGCTTCGCCATGGACACTCTGAAAAGAAGCTCAAAATTATGGGTATCAGA
AGTGGTATCAAGTCTGGACACACTGTTCGACACCGTCGAGAAAGAGCTCT
CCGAAAAGAACAGCATAAGCTACATGGTCCCTTTACAAAAATGCGTCTTT
AACTTCCTCTCAAAATCGATCGTGGGGAGCGGACCCAAAAAGCGACGGCG
AAATCGCCGAGAAAGGCTTCTTAATGCTCCAAAAGTGGCTGGCCTTGCAG
AACCTGGCCAAAGTCAGCATAAAAATTTTTGCACCCCCTTGAAAAAAACT
TCTTTCCTTTTTTTGGCTAACCCTTTTGGCCTTGGGCAGGGGGAAAATAA
AAAAAGTTCCAAAA
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