CX043395

Overview
NameCX043395
Unique NameCX043395
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5145 contig Csv1_Contig5145:494..1227. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX043395 vs. ExPASy Swiss-Prot
Match: WNK4_ARATH (Probable serine/threonine-protein kinase WNK4 OS=Arabidopsis thaliana GN=WNK4 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.186e-24
Identity = 73/179 (40.78%), Postives = 93/179 (51.96%), Query Frame = -3 
Query:  199 FNYEEDE----DGYHHPLYSFPS----CSSSQASLPGLVTYD-HDWLKXXXXXDAXXXXXXXXXXXXSLNYFSGDEHKSETSPVRRDKHPISTRAHNSTRFCPEENSYRQCKVMLESQRDSSSKTKRVMDCRRLTRNRSLVDVRSQLLHRQLVEEVHKRRLFNTVGAVENIGFQAPCEV 708
            + YEED+    D + H   SF S     SSSQASL   +     DW++     +             +LNY + DE+ S++        P+ +R HN TRFCPEE+S+ Q          SS+      D R LTRNRSLVDV+ QLLHR   EE  KRRLF TVG VE +GFQ+P  V
Sbjct:  392 WKYEEDDETPHDHHRHRTDSFHSSSSHASSSQASLSNYMARGLQDWVQDDLHDETYSQSSSHSGSYSNLNYIAVDEYSSQS--------PVMSRTHNMTRFCPEESSHLQSGQANAYAASSSTNRSLASDNRTLTRNRSLVDVQRQLLHRSPGEEARKRRLFKTVGDVETVGFQSPYAV 562
[Close]
BLAST of CX043395 vs. ExPASy Swiss-Prot
Match: WNK8_ORYSJ (Probable serine/threonine-protein kinase WNK8 OS=Oryza sativa subsp. japonica GN=WNK8 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11
Identity = 35/59 (59.32%), Postives = 46/59 (77.97%), Query Frame = -3 
Query:  208 QRDSSSKTKRVMDCRRLTRNRSLVDVRSQLLHRQLVEEVHKRRLFNTVGAVENIGFQAP 384
            QR+   + +R    RR++RNRS+VD+RSQLLHR LVEE++KR  FNTVGAV +IGF+ P
Sbjct:  535 QREGEEERRR----RRMSRNRSMVDMRSQLLHRTLVEELNKRLFFNTVGAVHDIGFRDP 589
[Close]
BLAST of CX043395 vs. ExPASy Swiss-Prot
Match: WNK7_ORYSJ (Probable serine/threonine-protein kinase WNK7 OS=Oryza sativa subsp. japonica GN=WNK7 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11
Identity = 35/59 (59.32%), Postives = 46/59 (77.97%), Query Frame = -3 
Query:  208 QRDSSSKTKRVMDCRRLTRNRSLVDVRSQLLHRQLVEEVHKRRLFNTVGAVENIGFQAP 384
            QR+   + +R    RR++RNRS+VD+RSQLLHR LVEE++KR  FNTVGAV +IGF+ P
Sbjct:  539 QREGEEERRR----RRMSRNRSMVDMRSQLLHRTLVEELNKRLFFNTVGAVHDIGFRDP 593
The following BLAST results are available for this feature:
BLAST of CX043395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
WNK4_ARATH7.186e-2440.78Probable serine/threonine-protein kinase WNK4 OS=A... [more]
WNK8_ORYSJ1.406e-1159.32Probable serine/threonine-protein kinase WNK8 OS=O... [more]
WNK7_ORYSJ1.406e-1159.32Probable serine/threonine-protein kinase WNK7 OS=O... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_10G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10G08-N16-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043395 ID=CX043395; Name=CX043395; organism=Citrus sinensis; type=EST; length=734bp
CTTAAACCGGCTGGAATTGATTTTAATGCCTCTGATGTGAGCATGCTTAT
TTGTAACTTTGAATTGTTCTTGTGATATAATTTTGTTTCATCCCAGCTTG
AAACAATGATACATTTCCTCTTGTTGAGTGCTGATGTATCATAAGAGCTA
CGATTTTAAGTTCTTCTGCTTTGAACTCTTTCTTGATTCCTTTTTCGAAA
CCTCACAAGGTGCCTGGAATCCAATATTCTCCACTGCTCCAACTGTGTTG
AACAACCGTCTCTTGTGCACCTCTTCAACCAGTTGTCTGTGTAGTAACTG
GCTACGAACATCTACTAACGATCGGTTTCTTGTTAATCTGCGGCAATCCA
TCACCCTTTTAGTTTTAGAACTAGAATCTCGTTGTGACTCAAGCATAACC
TTGCATTGTCTGTAGGAATTTTCTTCAGGACAAAATCTTGTTGAGTTGTG
AGCCCTTGTGCTGATGGGATGTTTATCTCTTCTTACAGGGCTTGTCTCTG
ACTTGTGCTCGTCGCCAGAAAAGTAATTCAAGCTGGAATATGCTCCTGAG
TGCGAAGAGCTTTGAGAGCTGGCATCATCAAAAAAATCATCTTTGAGCCA
ATCATGGTCATATGTGACCAAGCCTGGGAGTGACGCTTGGGATGATGAAC
AAGAGGGAAATGAGTATAAAGGATGATGATACCCATCTTCGTCTTCTTCG
TAGTTAAATGTATGGTAAGCTTCAAGGTGAGGCC
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