EL492435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB1_ARATH (Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana GN=TSB1 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.594e-27 Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 SVAGPHPYPMMVRDFHAVIGKETR+QALEKWGGKPDVL+ACVGGGSNAMGLFHEFV Sbjct: 268 SVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFV 323
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRBP2_ARATH (Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana GN=TSB2 PE=2 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 4.425e-27 Identity = 53/56 (94.64%), Postives = 56/56 (100.00%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 SVAGPHPYPMMVRDFHAVIGKETR+QA+EKWGGKPDVL+ACVGGGSNAMGLFHEFV Sbjct: 273 SVAGPHPYPMMVRDFHAVIGKETRKQAMEKWGGKPDVLVACVGGGSNAMGLFHEFV 328
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_CAMAC (Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata GN=TSB PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.547e-27 Identity = 53/56 (94.64%), Postives = 56/56 (100.00%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 SVAGPHPYPMMVR+FHAVIGKETR+QALEKWGGKPDVL+ACVGGGSNAMGLFHEFV Sbjct: 264 SVAGPHPYPMMVREFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFV 319
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB2_MAIZE (Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays GN=TSB2 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.892e-26 Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 SVAGPHPYPMMVR+FH VIGKETRRQA++KWGGKPDVL+ACVGGGSNAMGLFHEFV Sbjct: 241 SVAGPHPYPMMVREFHKVIGKETRRQAMDKWGGKPDVLVACVGGGSNAMGLFHEFV 296
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB1_MAIZE (Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays GN=TSB1 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.344e-26 Identity = 51/56 (91.07%), Postives = 54/56 (96.43%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 SVAGPHPYPMMVR+FH VIGKETRRQA+ KWGGKPDVL+ACVGGGSNAMGLFHEFV Sbjct: 187 SVAGPHPYPMMVREFHKVIGKETRRQAMHKWGGKPDVLVACVGGGSNAMGLFHEFV 242
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_ANAVT (Tryptophan synthase beta chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=trpB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.859e-25 Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SVAGPHPYPMMVRDFHAVIG+ETR QALEKWGG PD+L+ACVGGGSNAMGLF+EFV + S Sbjct: 210 SVAGPHPYPMMVRDFHAVIGQETRAQALEKWGGLPDILLACVGGGSNAMGLFYEFVNESS 269
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB2_ANASP (Tryptophan synthase beta chain 2 OS=Anabaena sp. (strain PCC 7120) GN=trpB2 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.859e-25 Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SVAGPHPYPMMVRDFHAVIG+ETR QALEKWGG PD+L+ACVGGGSNAMGLF+EFV + S Sbjct: 210 SVAGPHPYPMMVRDFHAVIGQETRAQALEKWGGLPDILLACVGGGSNAMGLFYEFVNESS 269
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_THEEB (Tryptophan synthase beta chain OS=Thermosynechococcus elongatus (strain BP-1) GN=trpB PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.684e-24 Identity = 48/58 (82.76%), Postives = 54/58 (93.10%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQ 187 SVAGPHPYPM+VR+FHAVIG ETR+Q LEKWGG PD+L+ACVGGGSNAMGLFHEFV + Sbjct: 207 SVAGPHPYPMLVREFHAVIGAETRQQCLEKWGGLPDILLACVGGGSNAMGLFHEFVEE 264
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_TRIEI (Tryptophan synthase beta chain OS=Trichodesmium erythraeum (strain IMS101) GN=trpB PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.579e-24 Identity = 49/60 (81.67%), Postives = 52/60 (86.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SVAGPHPYPMMVRDFHAVIG ETR Q LEKW G PD+L+ACVGGGSNAMGLFHEF+ S Sbjct: 207 SVAGPHPYPMMVRDFHAVIGVETRAQCLEKWNGLPDILMACVGGGSNAMGLFHEFINDPS 266
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB1_ANASP (Tryptophan synthase beta chain 1 OS=Anabaena sp. (strain PCC 7120) GN=trpB1 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.810e-24 Identity = 47/60 (78.33%), Postives = 54/60 (90.00%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SVAGPHPYPM+VRDFHA+IGKETR Q EKWGG PD+L+ACVGGGSNA+GLFHEF+ + S Sbjct: 207 SVAGPHPYPMIVRDFHAIIGKETRVQCQEKWGGLPDILLACVGGGSNAIGLFHEFIDEPS 266 The following BLAST results are available for this feature:
BLAST of EL492435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EL492435 ID=EL492435; Name=EL492435; organism=Citrus sinensis; type=EST; length=194bpback to top |