EY665536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665536 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 1.161e-60 Identity = 121/186 (65.05%), Postives = 142/186 (76.34%), Query Frame = 1 Query: 106 PLSFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTNNDRWKGLAYDQSDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPSPLGYMGDAKGKEKYSHVSFGFAKMGNPPHL*MIWSGKVEKG 663 P + NGS ++ SVPSS+F G+SLKKV+SR SKV S S +I A VDE+KQT+ DRWKGLA+D SDDQQDITRGKG VDSLFQAP G+GTH+A+MSSY+YIS GLR YN DN MDG YIAPAFMDKLVVHITKNFM+LPN+KVP LG G KG+ K FAKM P M+ +G++E G Sbjct: 15 PPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWG-GKGQGKSFQCELVFAKMRISPI--MMSAGELESG 197
BLAST of EY665536 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 4.413e-60 Identity = 125/188 (66.49%), Postives = 146/188 (77.66%), Query Frame = 1 Query: 106 PLSFNGSGAATS-VPSSSFFGTSLKKVSSRIPPSKVPSASFKITA-EVDENKQTNNDRWKGLAYDQSDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPSPLGYMGDAKGKEKYSHVSFGFAKMGNPPHL*MIWSGKVEKG 663 PLS NGSGA S VPS++FFG+SLKK +++ P K S +FKI A E+ E++QT+ D+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN MDG YIAPAFMDKLVVHITKNF+SLPNIK+P LG G KG+ K FAKMG P M+ +G++E G Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWG-GKGQGKSFQCELVFAKMGINPI--MMSAGELESG 197
BLAST of EY665536 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 4.413e-60 Identity = 125/188 (66.49%), Postives = 146/188 (77.66%), Query Frame = 1 Query: 106 PLSFNGSGAATS-VPSSSFFGTSLKKVSSRIPPSKVPSASFKITA-EVDENKQTNNDRWKGLAYDQSDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPSPLGYMGDAKGKEKYSHVSFGFAKMGNPPHL*MIWSGKVEKG 663 PLS NGSGA S VPS++FFG+SLKK +++ P K S +FKI A E+ E++QT+ D+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN MDG YIAPAFMDKLVVHITKNF+SLPNIK+P LG G KG+ K FAKMG P M+ +G++E G Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWG-GKGQGKSFQCELVFAKMGINPI--MMSAGELESG 197
BLAST of EY665536 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 226.098 bits (575), Expect = 2.422e-58 Identity = 124/189 (65.61%), Postives = 143/189 (75.66%), Query Frame = 1 Query: 109 LSFNGSGAATSVPSSSFFGTSLKK-VSSRIPPSKVPSASFKITA---EVDENKQTNNDRWKGLAYDQSDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPSPLGYMGDAKGKEKYSHVSFGFAKMGNPPHL*MIWSGKVEKG 663 L+ NGSGA S P+S+FFGTSLKK V+SR+P SKV + SFKI A E++E++QTN DRWKGLAYD SDDQQDITRGKG VD LFQAPM GTHYAVMSSY+Y+S GLR LDN DG YIAPAF+DKLVVHITKNFM+LPNIKVP LG G KG+ K FAKMG P M+ +G++E G Sbjct: 16 LNLNGSGAGASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWG-GKGQGKSFQCELVFAKMGINPI--MMSAGELESG 199
BLAST of EY665536 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 3.163e-58 Identity = 122/189 (64.55%), Postives = 140/189 (74.07%), Query Frame = 1 Query: 109 LSFNGSGAATSVPSSSFFGTSLKKV-SSRIPPSKVPSASFKITA---EVDENKQTNNDRWKGLAYDQSDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPSPLGYMGDAKGKEKYSHVSFGFAKMGNPPHL*MIWSGKVEKG 663 L+ NGSG S PSS+FFGTSLKKV SSR+P SK+ S SFKI A E++E +QT DRW+GLAYD SDDQQDITRGKG VDSLFQAPM GTHYAV+SS+ Y+S GLR YN DN DG YIAPAF+DKLVVHI KNFM+LPNIKVP LG G KG+ K FAKMG P M+ +G++E G Sbjct: 16 LNLNGSGGGASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWG-GKGQGKSFQCELVFAKMGINPI--MMSAGELESG 201
BLAST of EY665536 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 218.009 bits (554), Expect = 6.594e-56 Identity = 122/201 (60.70%), Postives = 144/201 (71.64%), Query Frame = 1 Query: 91 MAAAV---------PLSFNGSGA-ATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTNNDRWKGLAYDQSDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPSPLGYMGDAKGKEKYSHVSFGFAKMGNPPHL*MIWSGKVEKG 663 MAAAV PLS NGSG+ A S P+S+F G + VS +K + SFK+ A V E+KQT+ DRW+GLAYD SDDQQDITRGKG VDS+FQAPMGTGTH+AV+SSY+Y+SQGLR YNLDN MDG YIAPAFMDKLVVHITKNF++LPNIKVP LG G KG+ K AKMG P M+ +G++E G Sbjct: 1 MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLA-VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWG-GKGQGKSFQCELVMAKMGINPI--MMSAGELESG 197
BLAST of EY665536 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 1.125e-55 Identity = 118/190 (62.11%), Postives = 138/190 (72.63%), Query Frame = 1 Query: 106 PLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAE---VDENKQTNNDRWKGLAYDQSDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPSPLGYMGDAKGKEKYSHVSFGFAKMGNPPHL*MIWSGKVEKG 663 PLS N S A TSVPS++FFG +LKKV + + KV + S +I AE VD KQT++DRWKGL D SDDQQDITRGKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YNLDN +DG YIAPAFMDKLVVHITKNF+ LPNIKVP LG G KG+ K F KMG P M+ +G++E G Sbjct: 15 PLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWG-GKGQGKSFQCELVFRKMGINPI--MMSAGELESG 201
BLAST of EY665536 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.624e-54 Identity = 116/194 (59.79%), Postives = 137/194 (70.62%), Query Frame = 1 Query: 94 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAE---VDENKQTNNDRWKGLAYDQSDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPSPLGYMGDAKGKEKYSHVSFGFAKMGNPPHL*MIWSGKVEKG 663 A PLS N S A TSVPS++FFG +LKKV + + KV + S +I AE D KQT +DRWKGL D SDDQQDI RGKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YN+DNT+DG YIAP+FMDKLVVHITKNF+ LPNIKVP LG G KG+ K F KMG P M+ +G++E G Sbjct: 11 ANKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWG-GKGQGKSFQCELVFRKMGINPI--MMSAGELESG 201
BLAST of EY665536 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 1.164e-52 Identity = 112/193 (58.03%), Postives = 134/193 (69.43%), Query Frame = 1 Query: 85 SLMAAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTNNDRWKGLAYDQSDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPSPLGYMGDAKGKEKYSHVSFGFAKMGNPPHL*MIWSGKVEKG 663 S + A + N S VP+S+F G+ LK VSSR SK+ + +FKI AE DE KQT D+W+GLA+D SDDQQDITRGKG D LFQAPMGTGTH AV+SSY+YIS GLR Y+ DN +DG YIAPAFMDKL VHI KNF++LPNIKVP LG G KG+ K FAKMG P M+ +G++E G Sbjct: 6 STIGAVNRTTLNNSNYGGLVPNSAFLGSRLK-VSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWG-GKGQGKSFQCELVFAKMGINPI--MMSAGELESG 194
BLAST of EY665536 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 2.593e-52 Identity = 113/192 (58.85%), Postives = 139/192 (72.40%), Query Frame = 1 Query: 94 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITA-EVDENKQTNNDRWKGLAYDQSDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPSPLGYMGDAKGKEKYSHVSFGFAKMGNPPHL*MIWSGKVEKG 663 A+ PLS N S A TSVPS++FFG SLKKV ++ + KV + + ++ A EVDE K+ DRWKGL + SDDQQDI RGKG VDSLFQAP GTGTH+A+M+SY+Y+SQ L+TY LDN +DG YIAPAFMDKLVVHITKNF++LPNIKVP LG G KG+ K F KMG P M+ +G++E G Sbjct: 11 ASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVSSPKVSNRNLRVVAQEVDETKE---DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWG-GKGQGKSFQCELVFRKMGINPI--MMSAGELESG 196 The following BLAST results are available for this feature:
BLAST of EY665536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665536 ID=EY665536; Name=EY665536; organism=Citrus sinensis; type=EST; length=977bpback to top |