CX674336
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX674336 vs. ExPASy Swiss-Prot
Match: DHSA_ORYSJ (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH1 PE=2 SV=1) HSP 1 Score: 348.591 bits (893), Expect = 2.765e-95 Identity = 166/200 (83.00%), Postives = 181/200 (90.50%), Query Frame = -3 Query: 281 SVHGANRLGANSLLDIVVFGRACANRVAEIQRPGEKQKPLENNAGERTVAWLDKIRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKVRLDYRPVHMNTLDDEIESFPPKARVY 880 SVHGANRLGANSLLDIVVFGRACANRVAE +PGEKQKPL+ +AGE+T+AWLDK+RN+NGS+PTSKIRLNMQRVMQNNAAVFRTQETLEEGC+LI KAWES+HDVK++DRSLIWN+D NACITMHSAEARKESRGAHAREDFTKRDDE WMKH+LGYWENEKVRL YRPVHMNTLD E+ESFPPKARVY Sbjct: 431 SVHGANRLGANSLLDIVVFGRACANRVAETAKPGEKQKPLQKSAGEKTIAWLDKLRNANGSLPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLITKAWESYHDVKISDRSLIWNSDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEQWMKHSLGYWENEKVRLAYRPVHMNTLDSEVESFPPKARVY 630
BLAST of CX674336 vs. ExPASy Swiss-Prot
Match: DHSA1_ARATH (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Arabidopsis thaliana GN=SDH1-1 PE=1 SV=1) HSP 1 Score: 340.502 bits (872), Expect = 7.529e-93 Identity = 163/200 (81.50%), Postives = 180/200 (90.00%), Query Frame = -3 Query: 281 SVHGANRLGANSLLDIVVFGRACANRVAEIQRPGEKQKPLENNAGERTVAWLDKIRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKVRLDYRPVHMNTLDDEIESFPPKARVY 880 SVHGANRLGANSLLDIVVFGRACANRVAEI +PGEKQKPLE +AGE+T+AWLD++RNSNGS+PTS IRLNMQR+MQNNAAVFRTQETLEEGCQLIDKAWESF DV++ DRS+IWN+D NA ITMHSAEARKESRGAHAREDFTKR+D WMKHTLGYWE+EKVRLDYRPVHM+TLDDEI++FPPKARVY Sbjct: 435 SVHGANRLGANSLLDIVVFGRACANRVAEISKPGEKQKPLEKDAGEKTIAWLDRLRNSNGSLPTSTIRLNMQRIMQNNAAVFRTQETLEEGCQLIDKAWESFGDVQVKDRSMIWNSDLIETLELENLLINASITMHSAEARKESRGAHAREDFTKREDGEWMKHTLGYWEDEKVRLDYRPVHMDTLDDEIDTFPPKARVY 634
BLAST of CX674336 vs. ExPASy Swiss-Prot
Match: DHSA2_ARATH (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial OS=Arabidopsis thaliana GN=SDH1-2 PE=1 SV=1) HSP 1 Score: 336.65 bits (862), Expect = 1.087e-91 Identity = 160/200 (80.00%), Postives = 176/200 (88.00%), Query Frame = -3 Query: 281 SVHGANRLGANSLLDIVVFGRACANRVAEIQRPGEKQKPLENNAGERTVAWLDKIRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKVRLDYRPVHMNTLDDEIESFPPKARVY 880 SVHGANRLGANSLLDIVVFGRACANRVAEIQ+PGEK KPLE +AGE+++ WLD+IRNSNGS+PTSKIRLNMQRVMQNNAAVFRTQETLEEGC LIDK W+SF DVK+TDRS+IWN+D NACITMHSAEARKESRGAHAREDFTKRDD NWMKHTLGYWE V+L+YRPVHM TLDDE+++FPPK RVY Sbjct: 433 SVHGANRLGANSLLDIVVFGRACANRVAEIQKPGEKLKPLEKDAGEKSIEWLDRIRNSNGSLPTSKIRLNMQRVMQNNAAVFRTQETLEEGCDLIDKTWDSFGDVKVTDRSMIWNSDLIETMELENLLVNACITMHSAEARKESRGAHAREDFTKRDDANWMKHTLGYWEEGNVKLEYRPVHMKTLDDEVDTFPPKPRVY 632
BLAST of CX674336 vs. ExPASy Swiss-Prot
Match: DHSA_DICDI (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Dictyostelium discoideum GN=sdhA PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 6.231e-55 Identity = 117/204 (57.35%), Postives = 140/204 (68.63%), Query Frame = -3 Query: 281 SVHGANRLGANSLLDIVVFGRACANRVAEIQRPGEKQKPLENNAGERTVAWLDKIRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWES-FHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWE--NEKVRLDYRPVHMNTLD-DEIESFPPKARVY 880 SVHGANRLGANSLLDIVVFGRA AN + KPL NAGE ++A +D IR SNG+ T++IRL MQ++MQ NAAVFR + L+EG +LIDK S +D+K TDR++IWNTD A +TMHSAEARKESRGAHARED+ +RDD NWMKHTL Y + KV L+YRPV TLD E+E+ P RVY Sbjct: 423 SVHGANRLGANSLLDIVVFGRAVANEIENTLAKDTPHKPLPPNAGEESIANIDAIRFSNGTRSTAEIRLEMQKIMQRNAAVFRDGQVLKEGVELIDKCARSLINDLKTTDRTMIWNTDLIESLELQNLMTQAVLTMHSAEARKESRGAHAREDYKERDDANWMKHTLSYLDVNTGKVTLNYRPVVSETLDQSEMETIKPFKRVY 626
BLAST of CX674336 vs. ExPASy Swiss-Prot
Match: DHSA_RICBR (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia bellii (strain RML369-C) GN=sdhA PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 2.004e-53 Identity = 103/201 (51.24%), Postives = 142/201 (70.65%), Query Frame = -3 Query: 281 SVHGANRLGANSLLDIVVFGRACANRVAEIQRPGEKQKPLENNAGERTVAWLDKIRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTL-GYWENEKVRLDYRPVHMNTLDDEIESFPPKARVY 880 SVHGANRLG+NSLLD+VVFGR+ A + AE+ +P KP+ A E+ ++ DKIR+S+G+I + +RL MQR MQ++A+VFRTQE L+EG ++I + + D+K+ D+SLIWN+D A +T++SA ARKESRGAHARED+ R+D+ WM+HTL G E KV LDY+PV + TL DE+++ PP RVY Sbjct: 396 SVHGANRLGSNSLLDLVVFGRSAALKAAELIKPASPHKPVSEEALEKIISRFDKIRHSSGNISVADLRLKMQRTMQSHASVFRTQEVLDEGAEMISEIRSGYKDIKVNDKSLIWNSDLVEALELDNLLDQALVTVYSAAARKESRGAHAREDYPDRNDKEWMQHTLSGVDEAGKVVLDYKPVTLTTLSDEVKAIPPAKRVY 596
BLAST of CX674336 vs. ExPASy Swiss-Prot
Match: DHSA_DANRE (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Danio rerio GN=sdha PE=2 SV=2) HSP 1 Score: 207.994 bits (528), Expect = 5.832e-53 Identity = 117/220 (53.18%), Postives = 145/220 (65.91%), Query Frame = -3 Query: 281 SVHGANRLGANSLLDIVVFGRACANRVAEIQRPGEKQKPLENNAGERTVAWLDKIRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDE-----------------NWMKHTLGYWENE--KVRLDYRPVHMNTLD-DEIESFPPKARVY 880 SVHGANRLGANSLLD+VVFGRACA +AEI PGEK PL+ NAGE +VA LDK+R +NGS TS+IRLNMQ+ MQ++AAVFRT + L+EGC ++ ++S D+K DR ++WNTD NA T+ SAEARKESRGAHAREDF R DE +W KHTL Y + E KV L+YRPV ++LD ++ + PP R Y Sbjct: 442 SVHGANRLGANSLLDLVVFGRACALTIAEIDTPGEKLSPLKPNAGEASVANLDKMRYANGSTRTSEIRLNMQKTMQSHAAVFRTGDVLKEGCVKMESVYKSMDDIKTFDRGIVWNTDLVETLELQNLMLNAVQTIVSAEARKESRGAHAREDFKDRVDEYDYSKPLQGQVKKPFEQHWRKHTLSYVDPETGKVTLEYRPVIDSSLDAEDCAAIPPAIRSY 661
BLAST of CX674336 vs. ExPASy Swiss-Prot
Match: DHSX_YEAST (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial OS=Saccharomyces cerevisiae GN=YJL045W PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 1.100e-51 Identity = 107/203 (52.71%), Postives = 139/203 (68.47%), Query Frame = -3 Query: 281 SVHGANRLGANSLLDIVVFGRACANRVAEIQRPGEKQKPLENNAGERTVAWLDKIRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWE--NEKVRLDYRPVHMNTLDD-EIESFPPKARVY 880 SVHGANRLGANSLLD+VVFGRA AN +A+ +PG KPL +N G ++A LDK+RN+ GS+ TS+IRLNMQR MQ + +VFRTQ+TL+EG + I + ++F DV ++D+S+IWN+D A T SA RKESRGAHARED+ KRDD NW KHTL + + + V++ YR V +TLD+ E PP R Y Sbjct: 432 SVHGANRLGANSLLDLVVFGRAVANTIADTLQPGLPHKPLASNIGHESIANLDKVRNARGSLKTSQIRLNMQRTMQKDVSVFRTQDTLDEGVRNITEVDKTFEDVHVSDKSMIWNSDLVETLELQNLLTCATQTAVSASKRKESRGAHAREDYAKRDDVNWRKHTLSWQKGTSTPVKIKYRNVIAHTLDENECAPVPPAVRSY 634
BLAST of CX674336 vs. ExPASy Swiss-Prot
Match: DHSA_RICCN (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia conorii GN=sdhA PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.179e-51 Identity = 100/201 (49.75%), Postives = 140/201 (69.65%), Query Frame = -3 Query: 281 SVHGANRLGANSLLDIVVFGRACANRVAEIQRPGEKQKPLENNAGERTVAWLDKIRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTL-GYWENEKVRLDYRPVHMNTLDDEIESFPPKARVY 880 SVHGANRLG+NSLLD+VVFGR+ A + AE+ +P + ++ + E+ + DK+R++NG+I +++RL MQR MQ++A+VFRTQE L+EG +I + + D+K+ D+SLIWN+D A +T++SA ARKESRGAHARED+ R+DE+WMKHTL E KV LDY+PV + TL DE+ + PP RVY Sbjct: 396 SVHGANRLGSNSLLDLVVFGRSSALKAAELIKPASPHRSIKEESLEKIINRFDKVRHANGNILVAELRLKMQRTMQSHASVFRTQEVLDEGAGMISEIRSGYKDIKINDKSLIWNSDLVEALELDNLLDQALVTVYSAAARKESRGAHAREDYPDRNDEDWMKHTLSSIDEAGKVVLDYKPVTLTTLTDEVTAVPPVKRVY 596
BLAST of CX674336 vs. ExPASy Swiss-Prot
Match: DHSA_RICFE (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia felis GN=sdhA PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.129e-51 Identity = 100/201 (49.75%), Postives = 138/201 (68.66%), Query Frame = -3 Query: 281 SVHGANRLGANSLLDIVVFGRACANRVAEIQRPGEKQKPLENNAGERTVAWLDKIRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTL-GYWENEKVRLDYRPVHMNTLDDEIESFPPKARVY 880 SVHGANRLG+NSLLD+VVFGR+ A + AE+ P KP++ + E+ + DK+R++NG+I + +RL MQR MQ++A+VFRTQE L+EG +I + + D+K+ D+SLIWN+D A +T++SA ARKESRGAHARED+ R+D +WMKHTL E K+ +DY+PV + TL DEI + PP RVY Sbjct: 396 SVHGANRLGSNSLLDLVVFGRSSALKAAELISPASPHKPIKEASLEKIINRFDKVRHANGNILVADLRLKMQRTMQSHASVFRTQEVLDEGAGMISEIRNGYKDIKINDKSLIWNSDLVEALELDNLLDQALVTVYSAAARKESRGAHAREDYPDRNDGDWMKHTLSSIDEAGKIVIDYKPVTLTTLTDEISAIPPAKRVY 596
BLAST of CX674336 vs. ExPASy Swiss-Prot
Match: DHSAA_XENLA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit A, mitochondrial OS=Xenopus laevis GN=sdha-A PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.129e-51 Identity = 110/218 (50.46%), Postives = 138/218 (63.30%), Query Frame = -3 Query: 281 SVHGANRLGANSLLDIVVFGRACANRVAEIQRPGEKQKPLENNAGERTVAWLDKIRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLTDRSLIWNTDXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDD-----------------ENWMKHTLGYWENE-KVRLDYRPVHMNTLDDEIESFPPKARVY 880 SVHGANRLGANSLLD+VVFGRACA +AE +PGE ++ NAGE +VA LDK+R +NGS TS+IR+NMQ+ MQN+AAVFRT L+EGC+ + S D+K DR ++WNTD A T++ AEARKESRGAHARED+ R D E+W KHTL Y + + KV L+YRPV TL+++ S PP R Y Sbjct: 448 SVHGANRLGANSLLDLVVFGRACALSIAESCKPGEAVPSIKENAGEESVANLDKLRYANGSTRTSEIRINMQKTMQNHAAVFRTGSVLKEGCEKLSVINSSMDDIKTFDRGIVWNTDLVETLELQNLMLCALQTINGAEARKESRGAHAREDYKVRIDEYDFSKPLQGQQKKSFNEHWRKHTLSYVDKKGKVSLEYRPVIDTTLNEDCASVPPAIRSY 665 The following BLAST results are available for this feature:
BLAST of CX674336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX674336 ID=CX674336; Name=CX674336; organism=Citrus sinensis; type=EST; length=882bpback to top |