CX674332

Overview
NameCX674332
Unique NameCX674332
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX674332_ssr339 microsatellite CX674332_ssr339:339..350. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5397 contig Csv1_Contig5397:1..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX674332 vs. ExPASy Swiss-Prot
Match: CDC20_DICDI (Anaphase-promoting complex subunit cdc20 OS=Dictyostelium discoideum GN=cdc20 PE=1 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 8.193e-68
Identity = 122/186 (65.59%), Postives = 145/186 (77.96%), Query Frame = -1
Query:  310 IINNDVRVRDHIVETYRGHHQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASSNSVTQWLHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVF 867
            I N+DVRV++H V T  GH QEVCGLKWS  G QLASGGNDN+++IWD    +S +     H  E+HT+AV+A+AWCPFQ NLLATGGG  DR I+FWNT TG CLN+VDT SQVC++ W+   REL+SSHG++QNQL +WKYPSMVK AEL+GHTSR L  A SPDG TV SA+ADETLRFW VF
Sbjct:  287 IFNHDVRVQNHHVSTLSGHSQEVCGLKWSHDGGQLASGGNDNIINIWD---INSENFETPAHTFEQHTAAVRALAWCPFQPNLLATGGGAADRTIRFWNTITGVCLNTVDTMSQVCSIQWSTTYRELVSSHGYSQNQLCVWKYPSMVKCAELTGHTSRALHTAISPDGETVVSASADETLRFWRVF 469          
BLAST of CX674332 vs. ExPASy Swiss-Prot
Match: CDC20_RAT (Cell division cycle protein 20 homolog OS=Rattus norvegicus GN=Cdc20 PE=1 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 4.354e-61
Identity = 109/198 (55.05%), Postives = 140/198 (70.71%), Query Frame = -1
Query:  274 IINNDVRVRDHIVETYRGHHQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASSNSVTQWLHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVFGAPQVISKSAPK 867
            I ++DVRV +H V T  GH QEVCGL+W+  G+ LASGGNDN++++W      S  V   L    +H  AVKA+AWCP+QSN+LATGGG  DR I+ WN  +GACL++VD  SQVC++LW+ + +EL+S HGF QNQL +WKYP+M K+AEL GHT+RVL +  SPDG TVASAAADETLR W  F     + +   K
Sbjct:  290 IHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNIVNVWPSGPGESGWVP--LQTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSGACLSAVDVHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTARVLSLTMSPDGATVASAAADETLRLWRCFELDPALRREREK 485          
BLAST of CX674332 vs. ExPASy Swiss-Prot
Match: CDC20_HUMAN (Cell division cycle protein 20 homolog OS=Homo sapiens GN=CDC20 PE=1 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 4.354e-61
Identity = 109/186 (58.60%), Postives = 137/186 (73.66%), Query Frame = -1
Query:  310 IINNDVRVRDHIVETYRGHHQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASSNSVTQWLHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVF 867
            I ++DVRV +H V T  GH QEVCGL+W+  G+ LASGGNDNL+++W  +      V   L    +H  AVKA+AWCP+QSN+LATGGG  DR I+ WN  +GACL++VD  SQVC++LW+ + +EL+S HGF QNQL +WKYP+M K+AEL GHTSRVL +  SPDG TVASAAADETLR W  F
Sbjct:  290 IHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVP--LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 473          
BLAST of CX674332 vs. ExPASy Swiss-Prot
Match: CDC20_PIG (Cell division cycle protein 20 homolog OS=Sus scrofa GN=CDC20 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 9.700e-61
Identity = 108/186 (58.06%), Postives = 137/186 (73.66%), Query Frame = -1
Query:  310 IINNDVRVRDHIVETYRGHHQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASSNSVTQWLHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVF 867
            I ++DVRV +H V T  GH QEVCGL+W+  G+ LASGGNDNL+++W  +      V   L    +H  AVKA+AWCP+QSN+LATGGG  DR I+ WN  +GACL++VD  SQVC++LW+ + +EL+S HGF QNQL +WKYP+M K+AEL GHT+RVL +  SPDG TVASAAADETLR W  F
Sbjct:  290 IHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVP--LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTARVLSLTMSPDGATVASAAADETLRLWRCF 473          
BLAST of CX674332 vs. ExPASy Swiss-Prot
Match: CDC20_MOUSE (Cell division cycle protein 20 homolog OS=Mus musculus GN=Cdc20 PE=1 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 1.655e-60
Identity = 108/198 (54.55%), Postives = 139/198 (70.20%), Query Frame = -1
Query:  274 IINNDVRVRDHIVETYRGHHQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASSNSVTQWLHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVFGAPQVISKSAPK 867
            I ++DVRV +H V T  GH QEVCGL+W+  G+ LASGGNDN++++W      S      L    +H  AVKA+AWCP+QSN+LATGGG  DR I+ WN  +GACL++VD  SQVC++LW+ + +EL+S HGF QNQL +WKYP+M K+AEL GHT+RVL +  SPDG TVASAAADETLR W  F     + +   K
Sbjct:  290 IHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNIVNVWPSGPGESGWAP--LQTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSGACLSAVDVHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTARVLGLTMSPDGATVASAAADETLRLWRCFEMDPALRREREK 485          
BLAST of CX674332 vs. ExPASy Swiss-Prot
Match: FZR3_ARATH (Protein FIZZY-RELATED 3 OS=Arabidopsis thaliana GN=FZR3 PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.072e-59
Identity = 108/186 (58.06%), Postives = 137/186 (73.66%), Query Frame = -1
Query:  310 IINNDVRVRDHIVETYRGHHQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASSNSVTQWLHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVF 867
            I+ +D+RV+   V    GH  EVCGLKWS   ++LASGGNDN L +W+      N   Q + +L EHT+AVKAI W P QS+LLA+GGG  DRCI+FWNT  G  LNS+DTGSQVC L W+KN  E++S+HG++QNQ+ LWKYPSM K+A L+GH+ RVL++A SPDG T+ + A DETLRFWNVF
Sbjct:  279 ILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWN------NHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVF 458          
BLAST of CX674332 vs. ExPASy Swiss-Prot
Match: FZR1_ARATH (Protein FIZZY-RELATED 1 OS=Arabidopsis thaliana GN=FZR1 PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.885e-58
Identity = 104/196 (53.06%), Postives = 140/196 (71.43%), Query Frame = -1
Query:  280 IINNDVRVRDHIVETYRGHHQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASSNSVTQWLHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVFGAPQVISKSA 867
            I+  D+R ++  V   +GH  E+CGLKWS+  ++LASGGNDN L +W++        TQ + R  EH +AVKAIAW P    LLA+GGG  DRCI+FWNT T   LN VDT SQVC L+W+KN  EL+S+HG++QNQ+ +WKYP+M K+A L+GH+ RVL++A SPDG T+ + A DETLRFWNVF +P+  S+ +
Sbjct:  273 ILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHS------TQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPKSQSRES 462          
BLAST of CX674332 vs. ExPASy Swiss-Prot
Match: FZR2_ARATH (Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana GN=FZR2 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.815e-57
Identity = 104/190 (54.74%), Postives = 136/190 (71.58%), Query Frame = -1
Query:  298 IINNDVRVRDHIVETYRGHHQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASSNSVTQWLHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVFGAPQ 867
            I+  D+R ++  V    GH  EVCGLKWS   ++LASGGNDN L +W++        TQ + +  EHT+AVKAIAW P    LLA+GGG  DRCI+FWNT T   L+S+DT SQVC L W+KN  EL+S+HG++QNQ+ +WKYP+M K+A L+GHT RVL++A SPDG T+ + A DETLRFWNVF +P+
Sbjct:  281 ILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHS------TQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 464          
BLAST of CX674332 vs. ExPASy Swiss-Prot
Match: CDH1_DICDI (Anaphase-promoting complex subunit cdh1 OS=Dictyostelium discoideum GN=cdh1 PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.603e-55
Identity = 105/212 (49.53%), Postives = 143/212 (67.45%), Query Frame = -1
Query:  310 IINNDVR-VRDHIVETYRGHHQEVCGLKWSASGQQLASGGNDNLLHIWDRSM----------------ASSNSVTQW---------LHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVF 867
            I+++DVR   ++      GH  E+CGLKWS  GQQLASGGNDNLL++WD SM                ++++S++Q          L++ + H +AVKAIAW P Q  LLA+GGG  D+CI+FWNT TG  + S+DTGSQVC L W+KN  EL+S+HG++QNQ+T+W YP+M  +  L+GHT RVL++A SPDG TV + A D +LRFWN+F
Sbjct:  519 ILHHDVRDCSNNYTNRLVGHRHEICGLKWSPDGQQLASGGNDNLLNVWDHSMTQQPQQQHQPPPPPPSSNTSSISQQQQQQNTSKPLYQFKFHYAAVKAIAWSPHQRGLLASGGGTHDKCIRFWNTTTGQSIQSIDTGSQVCNLAWSKNINELVSTHGYSQNQITVWNYPTMTPVTTLTGHTMRVLYLAVSPDGQTVCTGAGDNSLRFWNLF 730          
BLAST of CX674332 vs. ExPASy Swiss-Prot
Match: FZR_MOUSE (Fizzy-related protein homolog OS=Mus musculus GN=Fzr1 PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.772e-54
Identity = 99/179 (55.31%), Postives = 128/179 (71.51%), Query Frame = -1
Query:  283 RGHHQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASSNSVTQWLHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVFGAPQVISKS 819
            +GH QEVCGLKWS   Q LASGGNDN L +W+ S  S       + +  EH +AVKAIAW P Q  LLA+GGG  DRCI+FWNT TG  L  +DTGSQVC L W+K+  EL+S+HG++QNQ+ +WKYPS+ ++A+L+GH+ RVL++A SPDG  + + A DETLRFWNVF   +   +S
Sbjct:  310 QGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSSLSP------VQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKTRSTKES 482          
The following BLAST results are available for this feature:
BLAST of CX674332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
CDC20_DICDI8.193e-6865.59Anaphase-promoting complex subunit cdc20 OS=Dictyo... [more]
CDC20_RAT4.354e-6155.05Cell division cycle protein 20 homolog OS=Rattus n... [more]
CDC20_HUMAN4.354e-6158.60Cell division cycle protein 20 homolog OS=Homo sap... [more]
CDC20_PIG9.700e-6158.06Cell division cycle protein 20 homolog OS=Sus scro... [more]
CDC20_MOUSE1.655e-6054.55Cell division cycle protein 20 homolog OS=Mus musc... [more]
FZR3_ARATH1.072e-5958.06Protein FIZZY-RELATED 3 OS=Arabidopsis thaliana GN... [more]
FZR1_ARATH5.885e-5853.06Protein FIZZY-RELATED 1 OS=Arabidopsis thaliana GN... [more]
FZR2_ARATH3.815e-5754.74Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana GN... [more]
CDH1_DICDI1.603e-5549.53Anaphase-promoting complex subunit cdh1 OS=Dictyos... [more]
FZR_MOUSE1.772e-5455.31Fizzy-related protein homolog OS=Mus musculus GN=F... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_5G10_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-5G10-M19-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674332 ID=CX674332; Name=CX674332; organism=Citrus sinensis; type=EST; length=867bp
TTTTTTTTTTTTTTTTAAGTAAAATATACAGATAAATTATGCCCAACACT
GAGAAAAGCAATTGGAGGGAAGAGTAATTATGAAAGTTGTTTACGTAAAG
CTACTGGCCAAGATCAAGTGATAACTAATTAAAGTCACTCAATCAAGTGA
CCAAAAACACGGGGGTGTGTATTTGGCCAAAATCTGTATATATGTACAGA
TCGAGTATATACAATATAATGTTATCACTTGTCACCGTATGCGATTCAAC
TGCGCAAATGGTTCGCGGTTAGGTTTAGGAGCAGATTTAGAAATTACTTG
GGGAGCCCCGAAAACATTCCAAAATCTGAGTGTTTCATCTGCTGCTGCTG
ATGCCACTGTACAGCCATCTGGGCTCTGCGCCATGAACAGCACTCTTGAG
GTATGCCCACTAAGCTCTGCCATCTTCACCATTGAAGGGTATTTCCATAG
TGTGAGTTGATTCTGTGTAAAGCCATGGGAGCTAAGCAACTCTCTCTCAT
TCTTGTTCCAAAGCAAAGCACAGACTTGAGATCCCGTATCTACAGAATTC
AAGCATGCCCCGGTGTGAGTGTTCCAGAATTTTATACACCGATCACCTCC
ACCTCCACCAGTGGCTAATAAATTGCTCTGGAAAGGACACCAAGCAATAG
CCTTGACAGCAGATGTGTGTTCCTCTAGTCTGTGAAGCCACTGTGTTACA
GAATTTGAAGAAGCCATTGATCTGTCCCATATGTGAAGGAGGTTATCATT
GCCTCCACTTGCTAATTGCTGTCCTGAAGCAGACCATTTTAGCCCACATA
CCTCTTGATGGTGACCTCTGTATGTTTCGACAATATGATCTCTTACTCTC
ACATCGTTGTTAATAAT
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