CX674330
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX674330 vs. ExPASy Swiss-Prot
Match: SFRS1_ARATH (Pre-mRNA-splicing factor SF2 OS=Arabidopsis thaliana GN=SF2 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.169e-28 Identity = 58/82 (70.73%), Postives = 69/82 (84.15%), Query Frame = -2 Query: 497 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRNPWARGRITVK 742 G SR SE+RV+V GLPSSASWQDLKDHMRK GDVCF++V RD+ GT GVVDYT EDMKYA++KLDDTEFRN ++ G + V+ Sbjct: 112 GPSRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVR 193
BLAST of CX674330 vs. ExPASy Swiss-Prot
Match: SFRS1_CHICK (Splicing factor, arginine/serine-rich 1 OS=Gallus gallus GN=SFRS1 PE=1 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20 Identity = 49/70 (70.00%), Postives = 58/70 (82.86%), Query Frame = -2 Query: 527 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRN 736 SR SEYRVIV GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR+ Sbjct: 116 SRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNTKFRS 182
BLAST of CX674330 vs. ExPASy Swiss-Prot
Match: SFR1B_DANRE (Splicing factor, arginine/serine-rich 1B OS=Danio rerio GN=sfrs1b PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20 Identity = 49/70 (70.00%), Postives = 58/70 (82.86%), Query Frame = -2 Query: 527 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRN 736 SR SEYRVIV GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR+ Sbjct: 115 SRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNTKFRS 181
BLAST of CX674330 vs. ExPASy Swiss-Prot
Match: SFR1A_DANRE (Splicing factor, arginine/serine-rich 1A OS=Danio rerio GN=sfrs1a PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20 Identity = 49/70 (70.00%), Postives = 58/70 (82.86%), Query Frame = -2 Query: 527 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRN 736 SR SEYRVIV GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR+ Sbjct: 125 SRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNTKFRS 191
BLAST of CX674330 vs. ExPASy Swiss-Prot
Match: SFRS1_XENTR (Splicing factor, arginine/serine-rich 1 OS=Xenopus tropicalis GN=sfrs1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.502e-20 Identity = 48/70 (68.57%), Postives = 58/70 (82.86%), Query Frame = -2 Query: 527 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRN 736 SR SEYRV+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR+ Sbjct: 135 SRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKLDNTKFRS 201
BLAST of CX674330 vs. ExPASy Swiss-Prot
Match: RSP3_CAEEL (Probable splicing factor, arginine/serine-rich 3 OS=Caenorhabditis elegans GN=rsp-3 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 7.185e-20 Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = -2 Query: 527 GISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRN 742 G R + YRVIV GLP + SWQDLKDHMR AGDVC+A+V+RD GT GVV++T ED+KYA+RKLDDT+FR+ Sbjct: 116 GPQRRTGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARD--GT-GVVEFTRYEDVKYAVRKLDDTKFRS 184
BLAST of CX674330 vs. ExPASy Swiss-Prot
Match: SFRS9_RAT (Splicing factor, arginine/serine-rich 9 OS=Rattus norvegicus GN=Sfrs9 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.566e-19 Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = -2 Query: 527 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRN 736 +R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR+ Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRS 172
BLAST of CX674330 vs. ExPASy Swiss-Prot
Match: SFRS9_MOUSE (Splicing factor, arginine/serine-rich 9 OS=Mus musculus GN=Sfrs9 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.566e-19 Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = -2 Query: 527 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRN 736 +R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR+ Sbjct: 107 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRS 173
BLAST of CX674330 vs. ExPASy Swiss-Prot
Match: SFRS9_HUMAN (Splicing factor, arginine/serine-rich 9 OS=Homo sapiens GN=SFRS9 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.566e-19 Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = -2 Query: 527 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRN 736 +R S++RV+V GLP S SWQDLKDHMR+AGDVC+A+V +D G+V+Y EDM+YA+RKLDDT+FR+ Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFRS 172
BLAST of CX674330 vs. ExPASy Swiss-Prot
Match: SFRS1_PONAB (Splicing factor, arginine/serine-rich 1 OS=Pongo abelii GN=SFRS1 PE=2 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 6.083e-19 Identity = 47/70 (67.14%), Postives = 57/70 (81.43%), Query Frame = -2 Query: 527 SRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGVVDYTNPEDMKYAIRKLDDTEFRN 736 SR SE RV+V GLP S SWQDLKDHMR+AGDVC+A+V RD GT GVV++ EDM YA+RKLD+T+FR+ Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GT-GVVEFVRKEDMTYAVRKLDNTKFRS 182 The following BLAST results are available for this feature:
BLAST of CX674330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674330 ID=CX674330; Name=CX674330; organism=Citrus sinensis; type=EST; length=794bpback to top |