CX674328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674328 vs. ExPASy Swiss-Prot
Match: VPS33_ARATH (Vacuolar protein sorting-associated protein 33 homolog OS=Arabidopsis thaliana GN=VPS33 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.851e-53 Identity = 110/163 (67.48%), Postives = 125/163 (76.69%), Query Frame = -1 Query: 316 NNLEKAGLFKKQETKSNWQLVKRALQL-VEDTDTANPNDISYVFSGYAPLSIRLVQNAIRSGWRPMEEILKLLPGPHYETKRGGFSSSPSFDMSQGLSSSIDKVGDGRRSXXXXXXXXXXXFAEISALRFLSAQEGMAYDVIVGTTKIISGNSLAETFSENLG 801 NNLEKAGL KKQE KSNW VKR L+L VEDTDT+ PNDI+YV+SGYAPLSIRL+Q AI SGWRPME+ILKLLPGPH ETKR GF SSPS D G S+ V DGRRS FAEISALR+L+++EGMAYD+IV TTKI++G +L ETF E LG Sbjct: 433 NNLEKAGLLKKQEFKSNWLTVKRTLKLIVEDTDTSRPNDIAYVYSGYAPLSIRLIQQAIHSGWRPMEDILKLLPGPHLETKRSGFPSSPSVDSLHGASNG---VADGRRSIVLVVFIGGVTFAEISALRYLASKEGMAYDLIVATTKIVNGATLIETFMEKLG 592
BLAST of CX674328 vs. ExPASy Swiss-Prot
Match: VP33A_MOUSE (Vacuolar protein sorting-associated protein 33A OS=Mus musculus GN=Vps33a PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.884e-25 Identity = 67/161 (41.61%), Postives = 94/161 (58.39%), Query Frame = -1 Query: 325 NNLEKAGLFKKQET-KSNWQLVKRALQL-VEDTDTANPNDISYVFSGYAPLSIRLVQNAIRSGWRPMEEILKLLPGPHYETKRGGFSSSPSFDMSQGLSSSIDKVGDGRRSXXXXXXXXXXXFAEISALRFLSAQEGMAYDVIVGTTKIISGNSLAETFSE 801 NNLEKAGL K Q ++N+ +++ L+L ++D + NP DISYV+SGYAPLS+RL Q R GWR +EE+L++LPGPH+E ++ + GL K G FAEI+ALRFLS E + ++ TTK+++GNS E E Sbjct: 447 NNLEKAGLLKAQTGGRNNYPTIRKTLRLWMDDVNEQNPTDISYVYSGYAPLSVRLAQLLSRPGWRSIEEVLRILPGPHFEERQ---------PLPTGLQK---KRQPGENRVTLVFFLGGVTFAEIAALRFLSQLEDGGTEYVIATTKLMNGNSWIEALME 595
BLAST of CX674328 vs. ExPASy Swiss-Prot
Match: VP33A_RAT (Vacuolar protein sorting-associated protein 33A OS=Rattus norvegicus GN=Vps33a PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.686e-24 Identity = 67/162 (41.36%), Postives = 94/162 (58.02%), Query Frame = -1 Query: 325 NNLEKAGLFKKQET-KSNWQLVKRALQL-VEDTDTANPNDISYVFSGYAPLSIRLVQNAIRSGWRPMEEILKLLPGPHYETKRGGFSSSPSFDMSQGLSSSIDKVGD-GRRSXXXXXXXXXXXFAEISALRFLSAQEGMAYDVIVGTTKIISGNSLAETFSE 801 NNLEKAGL K Q ++N+ +++ L+L ++D + NP DISYV+SGYAPLS+RL Q R GWR +EE+L++LPGPH+E + Q L + + K G FAEI+ALRFLS E + ++ TTK+I+G+S E E Sbjct: 446 NNLEKAGLLKAQTGGRNNYPTIRKTLRLWMDDVNEQNPTDISYVYSGYAPLSVRLAQLLSRPGWRSIEEVLRILPGPHFEER-------------QPLPTGVQKKRQPGENRVTLVFFLGGVTFAEIAALRFLSQLEDGGTEYVIATTKLINGSSWLEALME 594
BLAST of CX674328 vs. ExPASy Swiss-Prot
Match: VP33A_HUMAN (Vacuolar protein sorting-associated protein 33A OS=Homo sapiens GN=VPS33A PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.864e-23 Identity = 65/161 (40.37%), Postives = 93/161 (57.76%), Query Frame = -1 Query: 325 NNLEKAGLFKKQET-KSNWQLVKRALQL-VEDTDTANPNDISYVFSGYAPLSIRLVQNAIRSGWRPMEEILKLLPGPHYETKRGGFSSSPSFDMSQGLSSSIDKVGDGRRSXXXXXXXXXXXFAEISALRFLSAQEGMAYDVIVGTTKIISGNSLAETFSE 801 +NLEKAGL K Q ++N+ +++ L+L ++D + NP DISYV+SGYAPLS+RL Q R GWR +EE+L++LPGPH+E ++ + GL K G FAEI+ALRFLS E + ++ TTK+++G S E E Sbjct: 445 HNLEKAGLLKPQTGGRNNYPTIRKTLRLWMDDVNEQNPTDISYVYSGYAPLSVRLAQLLSRPGWRSIEEVLRILPGPHFEERQ---------PLPTGLQK---KRQPGENRVTLIFFLGGVTFAEIAALRFLSQLEDGGTEYVIATTKLMNGTSWIEALME 593
BLAST of CX674328 vs. ExPASy Swiss-Prot
Match: VP33A_DROME (Vacuolar protein sorting-associated protein 33A OS=Drosophila melanogaster GN=car PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.284e-13 Identity = 52/164 (31.71%), Postives = 91/164 (55.49%), Query Frame = -1 Query: 334 NNLEKAGLFKKQETKSNWQLVKRALQL-VEDTDTANPNDISYVFSGYAPLSIRLVQNAIRS-GWRPMEEILKLLPGPHYETKR------GGFSSSPSFDMSQGLSSSIDKVGDGRRSXXXXXXXXXXXFAEISALRFLSAQEGMAYDVIVGTTKIISGNSLAET 801 +NLEK+GL Q + ++++ L L V+D P DISYV S YAPL+ R+V+++++ GW+ ++ + LPGP +E + GG + + +S+G ++ +V FAEI+ALRFL+AQE + ++ TTK+++ +S ++ Sbjct: 459 SNLEKSGLLHLQTESRAYSVLRKTLHLTVDDNVEIEPKDISYVHSFYAPLTARIVEHSLKPLGWQTLKSQINNLPGPTFEDFQAQLVGIGGRHTVTT--VSEGSLLNVPRV-------VLVCFVGGCTFAEIAALRFLAAQEDNNVEFLIATTKVVNKHSFLDS 613 The following BLAST results are available for this feature:
BLAST of CX674328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX674328 ID=CX674328; Name=CX674328; organism=Citrus sinensis; type=EST; length=801bpback to top |