CX674323

Overview
NameCX674323
Unique NameCX674323
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1984 contig Csv1_Contig1984:1472..2233. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX674323 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.187e-46
Identity = 81/172 (47.09%), Postives = 125/172 (72.67%), Query Frame = -3
Query:  260 SLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDN-----NLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVVKAFMS 760
            + I G I Y++ GLH G+ H+++FVL L+A + +VESLMM +AS+VPN+L GII GAGIQG+ +L  GFFRLPND+P PFW+YP+ YI+FH +A QG ++N+  GL FD+      + GE VL + +Q+ +  SKW++L+++  M++ YR++F  +IKT E + P V+ +++
Sbjct:  492 TFISGTICYFMVGLHPGFTHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGFFRLPNDIPKPFWRYPMSYISFHFWALQGQYQNDLRGLTFDSQGSAFKIPGEYVLENVFQIDLHRSKWINLSVILSMIIIYRIIFFIMIKTNEDVTPWVRGYIA 663          
BLAST of CX674323 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 6.700e-36
Identity = 73/173 (42.20%), Postives = 115/173 (66.47%), Query Frame = -3
Query:  260 SLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKF------DNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVVKAFMS 760
            S+I G I Y L     G+ H+ +F L +F  + ++ESLMM+VAS+VPN+L G+ITGAG+ G++++  GFFRL  DLP  FW+YP+ YI++  +A QG +KN+F GL+F      +  + GE+V+   + +++ YSKW DLA +  ++V YRL+F  ++K  E+  P +KA  +
Sbjct:  470 SVITGTITYNLVKFRPGFSHYAFFCLNIFFSVSVIESLMMVVASVVPNFLMGLITGAGLIGIIMMTSGFFRLLPDLPKIFWRYPVSYISYGSWAIQGGYKNDFLGLEFEPLFPGEPKMTGEEVIEKVFGVKVTYSKWWDLAAVVAILVCYRLLFFVVLKLRERAGPALKAIQA 642          
BLAST of CX674323 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.546e-35
Identity = 72/173 (41.62%), Postives = 116/173 (67.05%), Query Frame = -3
Query:  260 SLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD------NNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVVKAFMS 760
            +LI G+I Y +     G  H+ +F L +F  + ++ESLMM+VASLVPN+L G+ITGAGI G++++  GFFRL  DLP  FW+YP+ ++++  +A QG +KN+F GL+FD        + GEQV+   + +Q+ +SKW DL+ +  ++V YR++F  ++K  E+ +P +KA  +
Sbjct:  471 ALITGSITYNMVKFRPGVSHWAFFCLNIFFSVSVIESLMMVVASLVPNFLMGLITGAGIIGIIMMTSGFFRLLPDLPKVFWRYPISFMSYGSWAIQGAYKNDFLGLEFDPMFAGEPKMTGEQVINKIFGVQVTHSKWWDLSAIVLILVCYRILFFIVLKLKERAEPALKAIQA 643          
BLAST of CX674323 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.175e-30
Identity = 66/167 (39.52%), Postives = 100/167 (59.88%), Query Frame = -3
Query:  275 LIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDN------NLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVV 757
            L   +I  Y+     G  HF Y  L L   +  VES MM++AS+VPN+L G++ GAG  G+M+L  GFFR   DLP  FW+YP+ YI +  +A QG +KNE  G+++D+       + GE +L+    +    SKW+DLA++  +++ YR+ F  I+K  EK+ PV+
Sbjct:  466 LSTSSITIYMVRFQSGGSHFFYNCLDLICAITTVESCMMMIASVVPNFLMGVMLGAGYIGIMVLSAGFFRFFPDLPMVFWRYPVSYINYGAWALQGAYKNEMIGVEYDSPLPLVPKMKGELILQTVLGINPESSKWLDLAVVMMILIGYRIAFFAILKFREKVFPVI 632          
BLAST of CX674323 vs. ExPASy Swiss-Prot
Match: AB3G_ARATH (ABC transporter G family member 3 OS=Arabidopsis thaliana GN=ABCG3 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.363e-19
Identity = 47/158 (29.75%), Postives = 85/158 (53.80%), Query Frame = -3
Query:  302 SLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD----NNLDGEQVLRDKWQLQMG-YSKWVDLAILFGMVVFYRLVFLGIIK 760
            S+    + Y++ GL + +   +YFVL  F C+L+ E LM+ +A +  +     +T   +  +M+L  G FR+   LP P W YP  YI+FH Y+ +G+ +NE+ G  F      ++ G Q ++  +Q+     +KW ++ +L  M   YRL+   +++
Sbjct:  522 SISSSLVFYFMVGLRDDFSLLMYFVLNFFMCLLVNEGLMLFIACIWRDVYWSTLTLISVHVIMMLAAGHFRIRTALPKPVWTYPFAYISFHTYSIEGLLENEYLGEVFAVGEVRSISGYQAIQGNYQISPDTNAKWRNMLVLLAMAFGYRLLVYVLLR 679          
BLAST of CX674323 vs. ExPASy Swiss-Prot
Match: AB23G_ARATH (ABC transporter G family member 23 OS=Arabidopsis thaliana GN=ABCG23 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.776e-12
Identity = 42/160 (26.25%), Postives = 89/160 (55.62%), Query Frame = -3
Query:  305 SLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLK---FDNN-----LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGII 760
            SL+    VY++ GL+   Q F +FVL ++  +L+  SL++ ++++ P++++G      + G   L  G+F     +P P W + +YY++ ++Y  + M  NE+  ++   F +      + GE VL+++   +   ++W+++ I+    VFYR++  GI+
Sbjct:  460 SLLFSIPVYWIVGLNPSIQAFSFFVLCVWLIILMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKEKIPKP-WMF-MYYVSLYRYPLESMVVNEYWSMREECFSSGNMGCLMTGEDVLKERGLDK--DTRWINVGIMLAFFVFYRILCWGIL 615          
BLAST of CX674323 vs. ExPASy Swiss-Prot
Match: AB8G_ARATH (ABC transporter G family member 8 OS=Arabidopsis thaliana GN=ABCG8 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.166e-12
Identity = 50/172 (29.07%), Postives = 83/172 (48.26%), Query Frame = -3
Query:  284 SLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD------------NNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYR-LVFLGIIKTVEKMK 760
            S+I    VY+L GL   +Q F YFVL+++  +L+  S ++ ++SL PNY+TG      +     L  G+F     LP  +W + +Y+ + +KYA   +  NE+  L                 + G  VL+ K   +    +W ++ +L G  V YR L FL +++ V   K
Sbjct:  421 SIIYSVSVYFLIGLCPTWQAFGYFVLVIWIILLMANSFVLFLSSLAPNYITGTSLVTILLAAFFLFSGYFISKESLP-KYWLF-MYFFSMYKYALDALLINEYSCLASKCLVWLEEAQTKICMVTGGDVLKKKGLHEK--QRWFNVYVLLGFFVLYRVLCFLALLRRVSGSK 588          
BLAST of CX674323 vs. ExPASy Swiss-Prot
Match: AB10G_ARATH (ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.712e-11
Identity = 39/147 (26.53%), Postives = 76/147 (51.70%), Query Frame = -3
Query:  320 SLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLV 760
            S++    VY+L GL      F+YF L+++  +L+  S +   ++LVPN++ G    +G+ G   L  G+F   + +P  +W++ ++Y++  KY ++ +  NE+ G  F    D ++             KW +L I+   +V YR++
Sbjct:  443 SMLFATPVYWLVGLRRELDGFLYFSLVIWIVLLMSNSFVACFSALVPNFIMGTSVISGLMGSFFLFSGYFIAKDRIP-VYWEF-MHYLSLFKYPFECLMINEYRGDVFLKQQDLKE-----------SQKWSNLGIMASFIVGYRVL 576          
The following BLAST results are available for this feature:
BLAST of CX674323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
AB11G_ARATH4.187e-4647.09ABC transporter G family member 11 OS=Arabidopsis ... [more]
AB15G_ARATH6.700e-3642.20ABC transporter G family member 15 OS=Arabidopsis ... [more]
AB12G_ARATH2.546e-3541.62ABC transporter G family member 12 OS=Arabidopsis ... [more]
AB13G_ARATH7.175e-3039.52ABC transporter G family member 13 OS=Arabidopsis ... [more]
AB3G_ARATH4.363e-1929.75ABC transporter G family member 3 OS=Arabidopsis t... [more]
AB23G_ARATH1.776e-1226.25ABC transporter G family member 23 OS=Arabidopsis ... [more]
AB8G_ARATH5.166e-1229.07ABC transporter G family member 8 OS=Arabidopsis t... [more]
AB10G_ARATH5.712e-1126.53ABC transporter G family member 10 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_5G05_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-5G05-M9-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674323 ID=CX674323; Name=CX674323; organism=Citrus sinensis; type=EST; length=762bp
GTAAATCTTGATCATACGAAAATACAATAATAAAAGTAGTTAAAGGATGT
TTCAAAGCTAAAATATGCTTCCTAATTAAATTATTCCTCTTCCACCCATG
AGAACAGAGTTTTTGTACCTACTTCGAGCAATTTTACTAGTTGAACTAAC
GAATATCCGAAGAGTCTTTTGTTCACGATCACTGGTAAAATATTTTGTCT
TCTTGTGGAGGTGTAGCACACGGATTTTCCATGATTTGAGTTGTTTGTTT
CATGGGCACAGACATAAAAGCTTTAACCACAGGCTTCATCTTTTCAACTG
TCTTGATGATTCCCAAGAATACAAGTCGATAAAAAACCACCATACCAAAC
AAGATAGCAAGATCAACCCACTTAGAATATCCCATTTGCAGTTGCCATTT
ATCTCTCAAAACCTGTTCACCATCTAGATTGTTGTCAAATTTCAGACCTT
CAAACTCGTTCTTGAACATTCCTTGGTACGCATATTTATGGAAAGCAATA
TAATATAATGGGTATTTCCAAAATGGATGAGGAAGATCATTTGGCAATCG
AAAAAATCCGCCGCCTAATATCATAAGGCCTTGAATTCCAGCTCCTGTTA
TGATGCCCGTCAGATAATTGGGCACCAAGCTTGCAACGATCATCATTAGG
CTCTCGACGAGCAACATGCAAGCAAACAATAACAAAACAAAGTATATGAA
GTGTTGATATCCTTCGTGAAGTCCCGGAAGGTAATAAACTATCGCTCCAG
GAATCAATGAAA
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