CX043280

Overview
NameCX043280
Unique NameCX043280
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7725 contig Csv1_Contig7725:535..1264. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO_TOBAC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 8.471e-94
Identity = 169/183 (92.35%), Postives = 175/183 (95.63%), Query Frame = -3
Query:  177 VNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPKDVKIQGIWYAQLE 725
            VNKNAPPDFQ TKLMTRLTYTLDEIEGPFEVS DGT+KF EKDGIDYAAVTVQL GGERVPFLFTIKQLVASGKPE+F GEFLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNTS STGKITLSVT+SKPETGEVIGVFESIQP DTDLGAKVPKDVKIQGIWYAQLE
Sbjct:  150 VNKNAPPDFQKTKLMTRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332          
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO_SOLLC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2)

HSP 1 Score: 338.961 bits (868), Expect = 1.598e-92
Identity = 166/184 (90.22%), Postives = 175/184 (95.11%), Query Frame = -3
Query:  177 GVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPKDVKIQGIWYAQLE 728
            GV+KN+ PDFQ TKLMTRLTYTLDEIEGPFEVSPDGT+KF EKDGIDYAAVTVQL GGERVPFLFTIKQLVASGKPE+F GEFLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNT+  TGKITLSVT+SKPETGEVIGVFESIQP DTDLGAKVPKDVKIQGIWYAQLE
Sbjct:  146 GVSKNSAPDFQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 329          
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO_FRIAG (Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 3.013e-91
Identity = 161/184 (87.50%), Postives = 173/184 (94.02%), Query Frame = -3
Query:  177 GVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPKDVKIQGIWYAQLE 728
            G+NKNAPP+FQ TKLMTRLTYTLDEIEGPFEV+PDGT+KF EKDGIDYAAVTVQL GGERVPFLFT+KQLVA+GKPE+F G +LVPSYRGSSFLDPKGRGGS GYDNA+ALPAGGRGDEE+L KENIK+ S STGKITLSVTKSKPETGEVIGVFESIQP DTDLG+K PKDVKIQGIWYAQLE
Sbjct:  146 GINKNAPPEFQKTKLMTRLTYTLDEIEGPFEVAPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGSYLVPSYRGSSFLDPKGRGGSAGYDNAVALPAGGRGDEEELVKENIKDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKAPKDVKIQGIWYAQLE 329          
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO_SOLTU (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 2.159e-89
Identity = 160/184 (86.96%), Postives = 171/184 (92.93%), Query Frame = -3
Query:  177 GVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPKDVKIQGIWYAQLE 728
            GV+KN+ PDFQ TKLMTRLTYTLDEIEGPFEVSPDGT+KF EKDGIDYAAVTVQL GGERVPFLFTIKQLVASGKPE+F  +FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNT+  TGKIT +VTKS P+TGEVIGVFESIQP DTDLGAK PKDVKIQGIWYAQLE
Sbjct:  149 GVSKNSAPDFQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSVDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQLE 332          
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO_SPIOL (Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 3.683e-89
Identity = 159/185 (85.95%), Postives = 172/185 (92.97%), Query Frame = -3
Query:  174 GVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPKDVKIQGIWYAQLEQ 728
            G++KN+ PDFQNTKLMTRLTYTLDEIEGPFEVS DGT+KF EKDGIDYAAVTVQL GGERVPFLFTIKQLVASGKPE+F G+FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN KN + S G ITLSVT SKPETGEVIGVF+S+QP DTDLGAKVPKDVKI+G+WYAQLEQ
Sbjct:  147 GISKNSGPDFQNTKLMTRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENNKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKVPKDVKIEGVWYAQLEQ 331          
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO2_ARATH (Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 6.282e-89
Identity = 155/183 (84.70%), Postives = 172/183 (93.99%), Query Frame = -3
Query:  177 VNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPKDVKIQGIWYAQLE 725
            V+KNAPPDFQNTKLMTRLTYTLDEIEGPFEV  DG++KF E+DGIDYAAVTVQL GGERVPFLFT+KQL ASGKPE+F G+FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L+KEN+KNT+ S G+ITL +TKSKPETGEVIGVFES+QP DTDLGAKVPKDVKIQG+WY Q+E
Sbjct:  149 VSKNAPPDFQNTKLMTRLTYTLDEIEGPFEVGSDGSVKFKEEDGIDYAAVTVQLPGGERVPFLFTVKQLEASGKPESFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELSKENVKNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQIE 331          
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO1_ARATH (Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2)

HSP 1 Score: 322.398 bits (825), Expect = 1.547e-87
Identity = 154/183 (84.15%), Postives = 171/183 (93.44%), Query Frame = -3
Query:  177 VNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPKDVKIQGIWYAQLE 725
            V+KNAPP+FQNTKLMTRLTYTLDEIEGPFEV+ DG++ F E+DGIDYAAVTVQL GGERVPFLFT+KQL ASGKP++F G+FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNT+ S G+ITL VTKSKPETGEVIGVFES+QP DTDLGAKVPKDVKIQG+WY QLE
Sbjct:  150 VSKNAPPEFQNTKLMTRLTYTLDEIEGPFEVASDGSVNFKEEDGIDYAAVTVQLPGGERVPFLFTVKQLDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELVKENVKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQLE 332          
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO_PEA (Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 1.003e-86
Identity = 157/184 (85.33%), Postives = 168/184 (91.30%), Query Frame = -3
Query:  177 GVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPKDVKIQGIWYAQLE 728
            GV KN P  FQNTKLMTRLTYTLDEIEGPFEVS DG++KF EKDGIDYAAVTVQL GGERVPFLFTIKQLVASGKP++F GEFLVPSYRGSSFLDPKGRG STGYDNA+ALPAGGRGDEE+L KEN K+ + S GKITLSVT++KPETGEVIGVFESIQP DTDLGAK PKDVKIQG+WYAQLE
Sbjct:  145 GVTKNTPLAFQNTKLMTRLTYTLDEIEGPFEVSADGSVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELGKENNKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLE 328          
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO_WHEAT (Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 7.697e-79
Identity = 150/184 (81.52%), Postives = 160/184 (86.96%), Query Frame = -3
Query:  177 GVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPKDVKIQGIWYAQLE 728
            G+ KN PP FQ TKLMTRLTYTLDE+EGP EV    T+KF EKDGIDYAAVTVQL GGERV FLFT+KQLVA+GKPE+F   FLVPSYRGSSFLDPKGRGGSTGYDNA ALP GGRGDEE+LAKEN+KN S STG ITLSVTKSKPETGEVIGVFES+QP DTDL A  PKDVKIQG+WYAQLE
Sbjct:  143 GIQKNEPPRFQKTKLMTRLTYTLDEMEGPLEVRRRRTLKFEEKDGIDYAAVTVQLPGGERVAFLFTVKQLVATGKPESFR-PFLVPSYRGSSFLDPKGRGGSTGYDNAGALPRGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLEA--PKDVKIQGVWYAQLE 323          
BLAST of CX043280 vs. ExPASy Swiss-Prot
Match: PSBO_CHLRE (Oxygen-evolving enhancer protein 1, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBO PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.592e-60
Identity = 117/181 (64.64%), Postives = 132/181 (72.93%), Query Frame = -3
Query:  177 KNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSFSTGKITLSVTKSKPETGEVIGVFESIQPFDTDLGAKVPKDVKIQGIWYAQLE 719
            K    +F  TKLMTRLTYTLD + G F+V  DG+ +  E DGIDYAA TVQL GGERV FLFTIKQ    G  +   G+FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPA  R D E+L KEN+K T    G    SV K  P TGE+ GVFESIQP DTDLGAK PKD+K+ G+WYAQL+
Sbjct:  113 KGGETEFVKTKLMTRLTYTLDAMSGSFKVGSDGSAELKEDDGIDYAATTVQLPGGERVAFLFTIKQFDGKGTLDGIKGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKITKALKGSAVFSVAKVDPVTGEIAGVFESIQPSDTDLGAKPPKDIKVTGLWYAQLK 291          
The following BLAST results are available for this feature:
BLAST of CX043280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PSBO_TOBAC8.471e-9492.35Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLLC1.598e-9290.22Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_FRIAG3.013e-9187.50Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLTU2.159e-8986.96Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SPIOL3.683e-8985.95Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO2_ARATH6.282e-8984.70Oxygen-evolving enhancer protein 1-2, chloroplasti... [more]
PSBO1_ARATH1.547e-8784.15Oxygen-evolving enhancer protein 1-1, chloroplasti... [more]
PSBO_PEA1.003e-8685.33Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_WHEAT7.697e-7981.52Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_CHLRE3.592e-6064.64Oxygen-evolving enhancer protein 1, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A09-B18-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043280 ID=CX043280; Name=CX043280; organism=Citrus sinensis; type=EST; length=730bp
TTTTTTTTTTTTTTTTTCAAAATTGCAAGCATTATTATAGCATGCCATGA
TAATATACAGACGTGATAACATTCTCAGTGCTACTAAATTGAATTACAGA
AATGTTTAGCAACACCTTCAACATGTTTCAAAATCTGAATAGGAATAAGT
ACACTCATACAAAAAAAGCTCTATTGCTCAAGCTGTGCATACCAAATACC
CTGGATCTTAACATCCTTTGGAACCTTGGCTCCCAAATCAGTATCAAATG
GCTGAATGCTCTCAAACACTCCAATAACCTCTCCGGTCTCAGGCTTGCTC
TTGGTAACGCTGAGGGTGATCTTCCCTGTTGAAAATGAAGTATTCTTGAT
ATTCTCCTTGGCGAGATCTTCCTCGTCCCCTCTTCCACCGGCAGGCAATG
CAATAGCATTGTCATAACCAGTTGAACCACCCCTTCCCTTTGGGTCCAAG
AAGGATGATCCACGGTAAGATGGTACCAGGAATTCTCCTCCGAAATTCTC
AGGTTTGCCTGATGCTACCAATTGTTTGATGGTGAAAAGGAAGGGCACAC
GCTCGCCTCCAGCCAGCTGAACTGTCACAGCAGCATAGTCAATTCCATCC
TTCTCCACAAACTTAATGGTGCCATCGGGGGACACTTCAAAAGGTCCCTC
AATCTCGTCAAGGGTGTAGGTAAGGCGGGTCATGAGCTTGGTGTTCTGGA
AATCTGGGGGGGCATTCTTGTTGACACCCT
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