EY717725

Overview
NameEY717725
Unique NameEY717725
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY717725 vs. ExPASy Swiss-Prot
Match: ICR4_ARATH (Interactor of constitutive active ROPs 4 OS=Arabidopsis thaliana GN=ICR4 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.043e-26
Identity = 76/151 (50.33%), Postives = 91/151 (60.26%), Query Frame = 2 
Query:  251 RGLEMPQRQSPRRPHQLRTXXXXXXXXXXRPIADRSPKIG-DRRSPR-GAPHSDPINQKKLGTRIADLESQLGQAQEELKNLKDQLASAEAAKKDAQE*LEXXXXXXXXXXXXXXXEQHSLPEIPQSETTKNDPRDEVAEENHP*TDVFEM 697
            RG E+PQRQSPR    L +          RPI DRSPK+G DRRSPR G PH+DP++QKKLG+RI+ LESQLGQAQEEL+ LK QLA AEAAKK AQE L                ++   P  P  E      RD++  + H  TDVFE+
Sbjct:    9 RGSELPQRQSPRLRTSLLSTSSDPHHLS-RPITDRSPKLGLDRRSPRSGGPHTDPLSQKKLGSRISGLESQLGQAQEELRLLKQQLAKAEAAKKRAQEELH--------------RKKSKKPNTPAPE------RDDIPGDGHQETDVFEV 138
[Close]
BLAST of EY717725 vs. ExPASy Swiss-Prot
Match: ICR1_ARATH (Interactor of constitutive active ROPs 1 OS=Arabidopsis thaliana GN=ICR1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.638e-18
Identity = 68/159 (42.77%), Postives = 87/159 (54.72%), Query Frame = 2 
Query:  260 EMPQRQSPRRPHQLRTXXXXXXXXXXRPIADRSPKIG-DRRSPR-GAPHSDPINQKKLGTRIADLESQLGQAQEELKNLKDQLASAEAAKKDAQE*LEXXXXXXXXXXXXXXXEQHSLPEIPQSET-TKNDPRDEVAEENHP*TDVFEMAR*KSTFEPE 727
            E+ QRQ+PR      T              D+S K G DR+SPR G P+SDP+ QKKLG RI+DLESQLGQAQEEL+ LK+QLA+AEA KK AQ+ L                + + L  + +S T  +   RDE+  +    TDVFE+   K   E E
Sbjct:    8 ELSQRQAPRLRSSSSTSDSNHSNRLIT--TDQSFKPGVDRKSPRSGGPNSDPLGQKKLGGRISDLESQLGQAQEELRLLKEQLANAEAVKKQAQDELH-----------KKSKKPNPLARVEESATEAERIDRDEIPGDVQKETDVFEVPVEKIAVEEE 153
The following BLAST results are available for this feature:
BLAST of EY717725 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ICR4_ARATH6.043e-2650.33Interactor of constitutive active ROPs 4 OS=Arabid... [more]
ICR1_ARATH4.638e-1842.77Interactor of constitutive active ROPs 1 OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-082-G08-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY717725 ID=EY717725; Name=EY717725; organism=Citrus sinensis; type=EST; length=878bp
CCACGCGTCCGCGGACGCGTGGGGGTAGTATGTGTGGCTGTTAGTTATTG
TACTATAGTCTCAAAGCAAATTGATGTAATCCTATTGTCAGTGGCAGGAA
AACTTCTATTATCATTTCTTTTCATGAGTTGGAAAACATTTTCAGAACAT
ATGGTTGTTACTTGAACTGTTAGAAACTTGCATATCCCAAATTTTTGTAG
TTGTGTGAATAATATATGGTGAATTCTGTTTTCCCATTTTAATGACAAAT
AGGGGTTTAGAAATGCCACAGAGACAGTCTCCTCGACGCCCACATCAGCT
CAGGACATCAAGTTCTGATTCAGATCCACCACATCACCGACCAATTGCTG
ACCGGAGTCCCAAGATCGGAGACCGTCGTTCTCCCAGAGGTGCCCCCCAT
TCTGATCCAATAAACCAAAAGAAACTCGGCACCCGCATTGCGGATTTAGA
ATCTCAACTTGGGCAAGCTCAAGAAGAGCTAAAAAATCTGAAGGACCAGT
TGGCTTCAGCTGAAGCTGCAAAGAAGGACGCTCAAGAATAGCTGGAGAAG
AAAACCAAGAAAACCTAAGTTCCAGGGACAGTGGACGTAGTGGAACAGCA
CTCTCTACCTGAAATTCCACAATCTGAAACAACCAAAAACGATCCCAGGG
ATGAAGTTGCTGAAGAAAACCACCCCTAAACTGATGTTTTTGAAATGGCA
CGATAAAAATCAACTTTTGAACCCGAGGTTGGATTCTGCCCACCGACCTT
CAAATAAAAATAAAAACAAATCCATCCATGATCTACTGGACCTCCACCAA
ACCTGAGCCAGAAAAGTGTCATCCGTGATGGAACTTTGGGAGAGGAGAAA
TAATTTTCTCAAACATAGCTGATGGAAA
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