CX043277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB1_ARATH (Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana GN=TSB1 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.827e-47 Identity = 91/152 (59.87%), Postives = 112/152 (73.68%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FG+FGGK+VPETL+ LS LE+ F + D FQ EL+ L+DYVGRE+PLYFAERLT+HYR E GEGP IYLKREDLNH GAHKINNA+ QA++AKR+G+K I+A TGAGQHGV ++MG DME+Q+ V M+LL Sbjct: 79 GRFGKFGGKYVPETLMHALSELESAFYALATDDDFQRELAGILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLL 230
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRBP2_ARATH (Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana GN=TSB2 PE=2 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 1.827e-47 Identity = 91/152 (59.87%), Postives = 111/152 (73.03%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FG+FGGK+VPETL+ LS LE F + D FQ EL+ L+DYVGRE+PLYFAERLT+HYR E GEGP IYLKREDLNH GAHKINNA+ QA++AKR+G+K I+A TGAGQHGV ++MG DME+Q+ V M+LL Sbjct: 84 GRFGKFGGKYVPETLMHALSELETAFYSLATDEDFQRELAEILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMRLL 235
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_CAMAC (Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata GN=TSB PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.445e-46 Identity = 89/152 (58.55%), Postives = 111/152 (73.03%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FG+FGGK+VPETL+ L+ LE+ F + D FQ+EL L+DYVGRE+PLYFAERLT HY+ GEGPEIYLKREDLNH GAHKINNA+ QA++AKR+G+K I+A TGAGQHGV ++MG DME+Q+ V M+LL Sbjct: 75 GRFGKFGGKYVPETLMYALTELESAFRSLSGDQVFQKELDGILKDYVGRESPLYFAERLTLHYKRPNGEGPEIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLQCVIYMGAQDMERQALNVFRMRLL 226
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB2_MAIZE (Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays GN=TSB2 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.002e-45 Identity = 87/152 (57.24%), Postives = 112/152 (73.68%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FGRFGGK+VPETL+ L+ LE+ F+ + D +FQ+EL L+DYVGRE+PLYFAERLT+HY+ G GP IYLKREDLNH GAHKINNA+ QA++AKR+G++ I+A TGAGQHGV ++MG DME+Q+ V M+LL Sbjct: 52 GRFGRFGGKYVPETLMHALTELESAFHALATDDEFQKELDGILKDYVGRESPLYFAERLTEHYKRADGTGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKQRIIAETGAGQHGVATATVCRRFGLQCIIYMGAQDMERQALNVFRMRLL 203
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_THEEB (Tryptophan synthase beta chain OS=Thermosynechococcus elongatus (strain BP-1) GN=trpB PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.183e-44 Identity = 89/152 (58.55%), Postives = 109/152 (71.71%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FGRFGGK+VPETL+ LS LEA F QD FQ EL LRDYVGR +PLYFAERL+ HY +++ + P+IYLKREDLNH GAHKINNA+GQ ++AKRMG++ I+A TGAGQHGV ++MG DME+Q VL M+LL Sbjct: 19 GRFGRFGGKYVPETLMPALSELEAAFAHYRQDPDFQAELQQLLRDYVGRPSPLYFAERLSAHYAHDQVQ-PQIYLKREDLNHTGAHKINNALGQVLLAKRMGKQRIIAETGAGQHGVATATVCARFGLQCVIYMGVQDMERQRLNVLRMRLL 169
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB1_MAIZE (Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays GN=TSB1 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.382e-44 Identity = 86/149 (57.72%), Postives = 108/149 (72.48%), Query Frame = 1 Query: 349 GRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 GRFGGK+VPETL+ L+ LE F+ + D +FQ+EL L+DYVGRE+PLYFAERLT+HY+ G GP IYLKREDLNH GAHKINNA+ QA++AKR+G++ I+A TGAGQHGV ++MG DME+Q+ V MKLL Sbjct: 1 GRFGGKYVPETLMHALTELENAFHALATDDEFQKELDGILKDYVGRESPLYFAERLTEHYKRADGTGPLIYLKREDLNHRGAHKINNAVAQALLAKRLGKQRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMKLL 149
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_ANAVT (Tryptophan synthase beta chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=trpB PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.600e-43 Identity = 86/152 (56.58%), Postives = 104/152 (68.42%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FGRFGGK+VPETL+ L+ LE + D FQ EL LRDYVGR TPLYFAERLT HY G G +IYLKREDLNH GAHKINNA+GQ ++AKRMG++ I+A TGAGQHGV ++MG DME+Q+ V M+L+ Sbjct: 21 GRFGRFGGKYVPETLMPALAELETAYQKYRHDPGFQAELQQLLRDYVGRATPLYFAERLTAHYARPDGTGAQIYLKREDLNHTGAHKINNALGQVLLAKRMGKQRIIAETGAGQHGVATATVCARFGLECVIYMGVHDMERQALNVFRMRLM 172
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB2_ANASP (Tryptophan synthase beta chain 2 OS=Anabaena sp. (strain PCC 7120) GN=trpB2 PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.600e-43 Identity = 86/152 (56.58%), Postives = 104/152 (68.42%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FGRFGGK+VPETL+ L+ LE + D FQ EL LRDYVGR TPLYFAERLT HY G G +IYLKREDLNH GAHKINNA+GQ ++AKRMG++ I+A TGAGQHGV ++MG DME+Q+ V M+L+ Sbjct: 21 GRFGRFGGKYVPETLMPALAELETAYQQYRNDPGFQAELQQLLRDYVGRATPLYFAERLTAHYARPDGTGAQIYLKREDLNHTGAHKINNALGQVLLAKRMGKQRIIAETGAGQHGVATATVCARFGLECVIYMGVHDMERQALNVFRMRLM 172
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_TRIEI (Tryptophan synthase beta chain OS=Trichodesmium erythraeum (strain IMS101) GN=trpB PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.730e-43 Identity = 85/152 (55.92%), Postives = 106/152 (69.74%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FG+FGGK+VPETL+ L LE QD F++EL LRDYVGR +PLYFAERLT HY G GP+IYLKREDLNH GAHKINNA+GQA++A+RMG++ I+A TGAGQHGV ++MG DME+Q+ V M+L+ Sbjct: 18 GRFGKFGGKYVPETLMPALLQLETACKKYSQDPTFKQELQQLLRDYVGRPSPLYFAERLTAHYTKPDGTGPQIYLKREDLNHTGAHKINNALGQALLAQRMGKQRIIAETGAGQHGVATATVCARFGLKCVIYMGIHDMERQALNVFRMRLM 169
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_SYNY3 (Tryptophan synthase beta chain OS=Synechocystis sp. (strain PCC 6803) GN=trpB PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.956e-41 Identity = 83/152 (54.61%), Postives = 103/152 (67.76%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FG +GGK+VPETL+ L+ LE + ++ FQEEL+ L+DYVGR +PLYFAERL+ HY G P IYLKREDLNH GAHKINNA+GQ ++AKRMG+K I+A TGAGQHGV ++MG DME+Q V M LL Sbjct: 19 GRFGNYGGKYVPETLMPALTELEEAYYRYRAESSFQEELAGLLKDYVGRSSPLYFAERLSAHYARPDGTYPLIYLKREDLNHTGAHKINNALGQVLLAKRMGKKRIIAETGAGQHGVATATVCARFGLECIIYMGVQDMERQKLNVFRMNLL 170 The following BLAST results are available for this feature:
BLAST of CX043277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 425
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043277 ID=CX043277; Name=CX043277; organism=Citrus sinensis; type=EST; length=796bpback to top |