CX043688

Overview
NameCX043688
Unique NameCX043688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 6.346e-32
Identity = 67/88 (76.14%), Postives = 73/88 (82.95%), Query Frame = -3
Query:  174 ARGTHVR----MQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHLIGSNVEPPVRVTKKR 425
            A G+H      MQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTY+TPE AA AYDRAAF++RGSKAKLNFPHLIGS    PVR+  +R
Sbjct:   79 ASGSHAPRQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPHLIGSCKYEPVRIRPRR 166          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 7.757e-30
Identity = 71/137 (51.82%), Postives = 84/137 (61.31%), Query Frame = -3
Query:  174 LHDGVNGGWISFDDQLGR----NNDXGSAIANIDTSMTSXXXXXXXXXPQMDVARGTHVRMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHLIGSNVEPPVRVTKKR 572
            L D +N GW  F+   G       +    ++  +T+               ++ RG H    YRGVRRRPWGKFAAEIRDP KNGARVWLGTY+T E AA AYD+AA++MRGSKA LNFPH IG N   PVRVT KR
Sbjct:   57 LKDALNVGWSPFNFSAGEVKSEQREEEIVVSPAETTAAPAA----------ELPRGRH----YRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGLNEPEPVRVTAKR 179          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.463e-28
Identity = 62/88 (70.45%), Postives = 69/88 (78.41%), Query Frame = -3
Query:  174 QMDVARGTHVRMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHLIGSNVEPPVRVTKKR 437
            Q  V +G H    YRGVR+RPWGKFAAEIRDP KNGARVWLGTY+T E AA AYD+AA++MRGSKA LNFPH IG N   PVR+T KR
Sbjct:   90 QAVVPKGRH----YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPEPVRLTAKR 173          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.911e-28
Identity = 62/88 (70.45%), Postives = 69/88 (78.41%), Query Frame = -3
Query:  174 QMDVARGTHVRMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHLIGSNVEPPVRVTKKR 437
            Q  V +G H    YRGVR+RPWGKFAAEIRDP KNGARVWLGTY+T E AA AYD+AA++MRGSKA LNFPH IG N   PVR+T KR
Sbjct:   94 QAVVPKGRH----YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPEPVRLTVKR 177          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF1_SOLLC (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.706e-27
Identity = 57/75 (76.00%), Postives = 63/75 (84.00%), Query Frame = -3
Query:  174 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHLIGSNVEPPVRVTKKR 398
            YRGVR+RPWGKFAAEIRDP KNGARVWLGTY++ E AA AY +AAF+MRG+KA LNFPH IG N   PVRVT KR
Sbjct:  107 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYESAEEAALAYGKAAFRMRGTKALLNFPHRIGLNEPEPVRVTVKR 181          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 3.984e-26
Identity = 57/84 (67.86%), Postives = 65/84 (77.38%), Query Frame = -3
Query:  174 ARGTHVRMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHLIGSNVEPPVRVTKKR 425
            A+G H    YRGVR+RPWGKFAAEIRDP KNGARVWLGT++T E AA AYDRAAF+MRGS+A LNFP  + S    PVR+  KR
Sbjct:  143 AKGKH----YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRIKSKR 222          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.977e-25
Identity = 54/75 (72.00%), Postives = 61/75 (81.33%), Query Frame = -3
Query:  174 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPHLIGSNVEPPVRVTKKR 398
            YRGVR+RPWGKFAAEIRDP KNGARVWLGT++T E AA AYD AAF+MRGS+A LNFP  + S    PVR+T KR
Sbjct:  117 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLRVNSGEPDPVRITSKR 191          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.582e-21
Identity = 45/59 (76.27%), Postives = 53/59 (89.83%), Query Frame = -3
Query:  225 QYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFP 401
            +YRGVRRRPWGK+AAEIRD  ++GARVWLGT++T E AA AYDRAAF+MRG+KA LNFP
Sbjct:   58 KYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFP 116          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.123e-20
Identity = 45/60 (75.00%), Postives = 51/60 (85.00%), Query Frame = -3
Query:  222 QYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPH 401
            +YRGVRRRPWGK+AAEIRD +K+G RVWLGT+DT E AA AYDRAA+ MRG  A LNFPH
Sbjct:   19 KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPH 78          
BLAST of CX043688 vs. ExPASy Swiss-Prot
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana GN=ERF095 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.123e-20
Identity = 45/61 (73.77%), Postives = 53/61 (86.89%), Query Frame = -3
Query:  222 MQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTPEGAAFAYDRAAFKMRGSKAKLNFPH 404
            M+YRGVR+RPWGK+AAEIRD  ++GARVWLGT++T E AA AYDRAAF MRG +A LNFPH
Sbjct:   12 MKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFPH 72          
The following BLAST results are available for this feature:
BLAST of CX043688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
ERF99_ARATH6.346e-3276.14Ethylene-responsive transcription factor 13 OS=Ara... [more]
ERF1_TOBAC7.757e-3051.82Ethylene-responsive transcription factor 1 OS=Nico... [more]
ERF2_TOBAC1.463e-2870.45Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF2_NICSY1.911e-2870.45Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF1_SOLLC4.706e-2776.00Ethylene-responsive transcription factor 1 OS=Sola... [more]
EF100_ARATH3.984e-2667.86Ethylene-responsive transcription factor 1A OS=Ara... [more]
EF101_ARATH1.977e-2572.00Ethylene-responsive transcription factor 2 OS=Arab... [more]
PTI5_SOLLC6.582e-2176.27Pathogenesis-related genes transcriptional activat... [more]
ERF97_ARATH1.123e-2075.00Ethylene-responsive transcription factor 14 OS=Ara... [more]
ERF95_ARATH1.123e-2073.77Ethylene-responsive transcription factor ERF095 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12G10_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12G10-M20-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043688 ID=CX043688; Name=CX043688; organism=Citrus sinensis; type=EST; length=598bp
GATTTGAAAAGAAATTATTAAGAAGAAGTACGATTACATGTTATGTAAAT
TTGAATCTAAGAAAATTAAGCAAAGCAGCTCTGATACTAATAATTAATTC
ACCCGGGTCTAAAGGACACAACGGATGATGATGAAGAAAGAGACGAAGAA
GAGGAAGGAGGCTCTGGAGACCCACGCTTCTTGGTAACCCTAACCGGGGG
CTCAACATTTGAGCCAATGAGGTGAGGAAAATTGAGCTTAGCCTTGGAGC
CTCGCATCTTGAAAGCGGCTCTATCATAAGCAAATGCTGCACCCTCAGGG
GTATCATAGGTGCCCAGCCAAACTCTTGCCCCATTCTTCTTAGGGTCCCT
TATCTCCGCAGCAAACTTCCCCCACGGCCTCCTCCTCACGCCTCTATACT
GCATCCTCACGTGAGTCCCACGTGCCACATCCATCTGTGGAGTTGGAAGA
GGAGGAGGATGAGGAGGAGAAGTCATACTCGTATCAATATTTGCTATTGC
ACTTCCNATATCATTATTACGACCAAGCTGATCATCAAACGAAATCCACC
CTCCGTTGACGCCGTCATGTAAGGAGGAGTGCGAGCTAGAGCTAACCC
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