CX043276
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_CAMAC (Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata GN=TSB PE=2 SV=1) HSP 1 Score: 358.992 bits (920), Expect = 1.834e-98 Identity = 165/223 (73.99%), Postives = 198/223 (88.79%), Query Frame = -1 Query: 135 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 803 K+A+SEAIR+WV N+E ++Y+ G+V GPHP P+MVREF ++IGKETRKQA+EKWGGKPDVL+ACVG GSNA+GLFHEF++D+DVR+IGVEAAGFGLDSGKHAATL KGEVGV HGAMSYLLQD++GQI+ HS+ GL+YPGVGPE SFL+D GRAE+Y TD+EA++A++RL RLEGI PALE SHALAFLEKLCPTLPNG KVV+NCSG GDKDV T + + Sbjct: 241 KDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFVDDKDVRMIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDIGRAEYYCCTDEEALEAFKRLSRLEGIIPALETSHALAFLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKH 463
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRBP2_ARATH (Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana GN=TSB2 PE=2 SV=2) HSP 1 Score: 347.436 bits (890), Expect = 5.521e-95 Identity = 159/223 (71.30%), Postives = 197/223 (88.34%), Query Frame = -1 Query: 135 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 803 K+A+SEAIR+WV N+E ++Y+ G+V GPHP P+MVR+F ++IGKETRKQAMEKWGGKPDVL+ACVG GSNA+GLFHEF++D +VR+IGVEAAGFGLDSGKHAATL KG+VGV HGAMSYLLQD++GQI+ HS+ GL+YPGVGPE SFL+D GRAE+++ TD+EA++A++R+ RLEGI PALE SHALA LEKLCPTLP+GA+VV+N SG GDKDV T + Y Sbjct: 250 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQAMEKWGGKPDVLVACVGGGSNAMGLFHEFVDDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDVGRAEYFSVTDEEALEAFKRVSRLEGIIPALETSHALAHLEKLCPTLPDGARVVLNFSGRGDKDVQTAIKY 472
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB1_ARATH (Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana GN=TSB1 PE=2 SV=1) HSP 1 Score: 344.739 bits (883), Expect = 3.579e-94 Identity = 158/223 (70.85%), Postives = 195/223 (87.44%), Query Frame = -1 Query: 135 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 803 K+A+SEAIR+WV N+E ++Y+ G+V GPHP P+MVR+F ++IGKETRKQA+EKWGGKPDVL+ACVG GSNA+GLFHEF+ND +VR+IGVEAAGFGLDSGKHAATL KG+VGV HGAMSYLLQD++GQI+ HS+ GL+YPGVGPE SF +D GRAE+Y+ TD+EA++A++R+ RLEGI PALE SHALA+LEKLCPTL +G +VV+N SG GDKDV TV Y Sbjct: 245 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPALETSHALAYLEKLCPTLSDGTRVVLNFSGRGDKDVQTVAKY 467
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB1_MAIZE (Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays GN=TSB1 PE=2 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 2.565e-92 Identity = 155/223 (69.51%), Postives = 191/223 (85.65%), Query Frame = -1 Query: 135 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 803 K+A+SEAIR+WV N+E ++Y+ G+V GPHP P+MVREF +IGKETR+QAM KWGGKPDVL+ACVG GSNA+GLFHEF+ D+DVRLIGVEAAG G+D+ KHAATL KG+VGV HG+MSYLLQD++GQ++ HS+ GL+YPGVGPE SFL+D GRAE+ + TDQEA+ A++R+ RLEGI PALE SHALA+LEKLCPTLP+G +VV+NCSG GDKDV T Y Sbjct: 164 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHKVIGKETRRQAMHKWGGKPDVLVACVGGGSNAMGLFHEFVEDQDVRLIGVEAAGHGVDTDKHAATLTKGQVGVLHGSMSYLLQDDDGQVIEPHSISAGLDYPGVGPEHSFLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSHALAYLEKLCPTLPDGVRVVLNCSGRGDKDVHTASKY 386
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB2_MAIZE (Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays GN=TSB2 PE=2 SV=1) HSP 1 Score: 335.88 bits (860), Expect = 1.662e-91 Identity = 153/223 (68.61%), Postives = 191/223 (85.65%), Query Frame = -1 Query: 135 KEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 803 K+A+SEAIR+WV N+E ++Y+ G+V GPHP P+MVREF +IGKETR+QAM+KWGGKPDVL+ACVG GSNA+GLFHEF+ D+DVRL+G+EAAG G+D+ KHAATL KG+VGV HG+MSYLLQD++GQ++ HS+ GL+YPGVGPE SFL+D GRAE+ + TDQEA+ A++R+ RLEGI PALE SHALA+LEKLCPTL +G +VVVNCSG GDKDV T Y Sbjct: 218 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHKVIGKETRRQAMDKWGGKPDVLVACVGGGSNAMGLFHEFVEDQDVRLVGLEAAGHGVDTDKHAATLTKGQVGVLHGSMSYLLQDDDGQVIEPHSISAGLDYPGVGPEHSFLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSHALAYLEKLCPTLADGVRVVVNCSGRGDKDVHTASKY 440
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB2_ANASP (Tryptophan synthase beta chain 2 OS=Anabaena sp. (strain PCC 7120) GN=trpB2 PE=3 SV=1) HSP 1 Score: 321.627 bits (823), Expect = 3.244e-87 Identity = 144/226 (63.72%), Postives = 187/226 (82.74%), Query Frame = -1 Query: 135 GCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 812 G K+A+SEAIR+WV N+E ++Y+ G+V GPHP P+MVR+F ++IG+ETR QA+EKWGG PD+LLACVG GSNA+GLF+EF+N+ ++LIGVEAAG G+++ KHAATL KG VGV HGAMSYLLQDE+GQ++ HS+ GL+YPGVGPE S+L+D GRAE+Y+ TD+EA+ A+QRL RLEGI PALE +HA+A+LE LCP L ++V+NCSG GDKDV TV + Sbjct: 184 GTLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGQETRAQALEKWGGLPDILLACVGGGSNAMGLFYEFVNESSIKLIGVEAAGEGVNTEKHAATLTKGRVGVLHGAMSYLLQDEDGQVIEAHSISAGLDYPGVGPEHSYLKDVGRAEYYSVTDEEALAAFQRLSRLEGIIPALETAHAIAYLETLCPQLDGSPRIVINCSGRGDKDVQTVAKF 409
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_ANAVT (Tryptophan synthase beta chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=trpB PE=3 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 4.237e-87 Identity = 143/226 (63.27%), Postives = 187/226 (82.74%), Query Frame = -1 Query: 135 GCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 812 G K+A+SEAIR+WV N+E ++Y+ G+V GPHP P+MVR+F ++IG+ETR QA+EKWGG PD+LLACVG GSNA+GLF+EF+N+ +RLIGVEAAG G+++ KHAATL KG VGV HGAMSYLLQDE+GQ++ HS+ GL+YPGVGPE S+L+D GRAE+Y+ TD++A+ A+QRL RLEGI PALE +HA+A+LE LCP L ++++NCSG GDKDV TV + Sbjct: 184 GTLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGQETRAQALEKWGGLPDILLACVGGGSNAMGLFYEFVNESSIRLIGVEAAGEGVNTEKHAATLTKGRVGVLHGAMSYLLQDEDGQVIEAHSISAGLDYPGVGPEHSYLKDVGRAEYYSVTDEQALAAFQRLSRLEGIIPALETAHAIAYLETLCPQLDGSPRIIINCSGRGDKDVQTVAKF 409
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_THEEB (Tryptophan synthase beta chain OS=Thermosynechococcus elongatus (strain BP-1) GN=trpB PE=3 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 2.103e-86 Identity = 147/226 (65.04%), Postives = 183/226 (80.97%), Query Frame = -1 Query: 135 GCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 812 G K+A+SEAIR+WV N+E ++Y+ G+V GPHP P++VREF ++IG ETR+Q +EKWGG PD+LLACVG GSNA+GLFHEF+ + VRLIGVEAAG GLD+G HAATL KGEVGV HGAMSYLLQD +GQ++ HS+ GL+YPGVGPE S+L+D GRAE+Y+ TD EAV A RL +LEGI PALE +HALA+LE LCP L ++V+NCSG GDKDV+T+ Y Sbjct: 181 GTLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVREFHAVIGAETRQQCLEKWGGLPDILLACVGGGSNAMGLFHEFVEEPQVRLIGVEAAGQGLDTGHHAATLTKGEVGVLHGAMSYLLQDADGQVVEAHSISAGLDYPGVGPEHSYLKDIGRAEYYSVTDTEAVAACVRLAQLEGILPALETAHALAYLETLCPQLTGQPRIVINCSGRGDKDVETIGRY 406
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_TRIEI (Tryptophan synthase beta chain OS=Trichodesmium erythraeum (strain IMS101) GN=trpB PE=3 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 4.685e-86 Identity = 147/223 (65.92%), Postives = 180/223 (80.72%), Query Frame = -1 Query: 144 GCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTV 812 G K+A+SEAIR+WV N+E ++Y+ G+V GPHP P+MVR+F ++IG ETR Q +EKW G PD+L+ACVG GSNA+GLFHEFIND VR+IGVEAAG G+D+ KHAATL G VGV HGAMSYLLQDEEGQI+ HS+ GL+YPGVGPE SFL+D+GR E+Y+ TD EAV A+QRL +LEGI PALE +HA+A+LE LCP L ++V NCSG GDKDV TV Sbjct: 181 GTLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGVETRAQCLEKWNGLPDILMACVGGGSNAMGLFHEFINDPSVRMIGVEAAGKGVDTNKHAATLTLGRVGVLHGAMSYLLQDEEGQIIEPHSISAGLDYPGVGPEHSFLKDSGRVEYYSVTDNEAVAAFQRLSQLEGIIPALETAHAIAYLETLCPQLSGSPRIVFNCSGRGDKDVQTV 403
BLAST of CX043276 vs. ExPASy Swiss-Prot
Match: TRPB_SYNY3 (Tryptophan synthase beta chain OS=Synechocystis sp. (strain PCC 6803) GN=trpB PE=3 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 1.044e-85 Identity = 145/226 (64.16%), Postives = 184/226 (81.42%), Query Frame = -1 Query: 135 GCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 812 G K+A+SEAIR+WV N+E ++Y+ G+V GPHP P+MVR+F +IG+ETR+QA++KWGG PD+LLACVG GSNA+GLF++FI++ VRLIG+EAAG + SGKHAATL G+ GV HGAMSYLLQD+EGQ+ HS+ GL+YPGVGPE S+L+D GRAE+Y+ TDQEA+ A QRL +LEGI PALE +HA A+LE LCP L NG ++V+NCSG GDKDV TV Y Sbjct: 182 GTLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHRVIGQETRQQALKKWGGLPDILLACVGGGSNAMGLFYDFIDEPAVRLIGIEAAGESIVSGKHAATLTMGKPGVLHGAMSYLLQDKEGQVTEAHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDQEAITALQRLSQLEGIIPALETAHAFAYLETLCPQLKNGERIVINCSGRGDKDVQTVAKY 407 The following BLAST results are available for this feature:
BLAST of CX043276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043276 ID=CX043276; Name=CX043276; organism=Citrus sinensis; type=EST; length=821bpback to top |