EY665425

Overview
NameEY665425
Unique NameEY665425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665425_ssr437 microsatellite EY665425_ssr437:437..446. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665425 vs. ExPASy Swiss-Prot
Match: PSBP1_TOBAC (Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Nicotiana tabacum GN=PSBP1 PE=3 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 1.390e-49
Identity = 111/185 (60.00%), Postives = 135/185 (72.97%), Query Frame = 3
Query:   96 MASTQCFLHHHALSTTPARTSSS---QRHVSNIKPTQIVCRAQKQAV-QEDDGSAV--SRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTTLTS*HTMEMDSSCQFPQNETPAKEREFLGQVL*IKNNFDPNSHVSVLITQTEKKSFLDYGSPKEFLNKGDYLRGKKSYSGKNFL*RGF 632
            MASTQCFLH HALS++ ART+SS   QR+VS++KP Q+VCRAQKQ+  QEDDG++V  SRRLALTVLIGAAA+GSKVSPADAAYGE+ANVFGKPK               Q P    P+KE EF GQVL  ++NFD  S++ V +T T+KKS  DYGSP+EFL + D+L GK++Y GK     GF
Sbjct:    1 MASTQCFLHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSPQEDDGNSVVVSRRLALTVLIGAAAIGSKVSPADAAYGEAANVFGKPKENTDFLAYNGDGFKLQVPAKWNPSKEVEFPGQVLRYEDNFDSTSNLIVTVTPTDKKSITDYGSPEEFLTQVDFLLGKQAYFGKTDSEGGF 185          
BLAST of EY665425 vs. ExPASy Swiss-Prot
Match: PSBP_CUCSA (Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis sativus GN=PSBP PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.007e-48
Identity = 109/183 (59.56%), Postives = 129/183 (70.49%), Query Frame = 3
Query:   96 MASTQCFLHHHALSTTPARTSSSQRHVSNIK-PTQIVCRAQKQA-VQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTTLTS*HTMEMDSSCQFPQNETPAKEREFLGQVL*IKNNFDPNSHVSVLITQTEKKSFLDYGSPKEFLNKGDYLRGKKSYSGKNFL*RGFPP 638
            MAST CFLHHHAL T  AR+SSS R  +  K P  +VCRAQKQ   QE++G  VSRRLALTVLIGAAA+GSKVSPADAAYGE+ANVFGKPK+                P    P+KEREF GQVL  ++NFD NS++SV+I  T+KKS  D+GSP+EFL+K DYL GK++Y GK     GF P
Sbjct:    1 MASTSCFLHHHAL-TAAARSSSSPRQAALPKSPQLLVCRAQKQQPAQEEEGGVVSRRLALTVLIGAAALGSKVSPADAAYGEAANVFGKPKSNTDYLPYSGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSNLSVIINPTDKKSIKDFGSPEEFLSKVDYLLGKQAYFGKTASEGGFDP 182          
BLAST of EY665425 vs. ExPASy Swiss-Prot
Match: PSBP2_TOBAC (Oxygen-evolving enhancer protein 2-2, chloroplastic OS=Nicotiana tabacum GN=PSBP2 PE=1 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 2.898e-47
Identity = 110/184 (59.78%), Postives = 132/184 (71.74%), Query Frame = 3
Query:   96 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQKQAVQEDDGS---AVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTTLTS*HTMEMDS-SCQFPQNETPAKEREFLGQVL*IKNNFDPNSHVSVLITQTEKKSFLDYGSPKEFLNKGDYLRGKKSYSGKNFL*RGF 632
            MASTQCFLHHHALST PART   +  V ++KP Q+ VCRAQKQ+  ++D     +VSRRLALTVLIGAAAVGSKVSPADAAYGE+ANVFGKPKT  T   T   D    Q P    P KE E+ GQVL  ++NFD  S+V V IT T+KKS  D+GSP++FL++ DYL G+++YSGK     GF
Sbjct:    1 MASTQCFLHHHALST-PARTPLVRSIVPSLKPNQLLVCRAQKQSAPQEDNVNSVSVSRRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKTD-TDFQTYNGDGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQVDYLLGRQAYSGKTDSEGGF 182          
BLAST of EY665425 vs. ExPASy Swiss-Prot
Match: PSBP1_ARATH (Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Arabidopsis thaliana GN=PSBP1 PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 4.185e-46
Identity = 102/182 (56.04%), Postives = 130/182 (71.43%), Query Frame = 3
Query:   96 MASTQCFLHHHALSTTPARTSSS---QRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTTLTS*HTMEMDSSCQFPQNETPAKEREFLGQVL*IKNNFDPNSHVSVLITQTEKKSFLDYGSPKEFLNKGDYLRGKKSYSGKNFL*RGF 632
            MA + CFLH  AL+++ AR+SSS   QRHVS  KP QI+C+AQ+    EDD SAVSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPKT              Q P    P+KE E+ GQVL  ++NFD  S+++V++T T+KKS  DYGSP+EFL++ +YL GK++Y G+     GF
Sbjct:    1 MAYSACFLHQSALASSAARSSSSSSSQRHVSLSKPVQIICKAQQS--HEDDNSAVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYPGQVLRFEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGF 180          
BLAST of EY665425 vs. ExPASy Swiss-Prot
Match: PSBP_SOLTU (Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum tuberosum GN=PSBP PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.543e-45
Identity = 102/179 (56.98%), Postives = 124/179 (69.27%), Query Frame = 3
Query:   99 ASTQCFLH-HHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTTLTS*HTMEMDSSCQFPQNETPAKEREFLGQVL*IKNNFDPNSHVSVLITQTEKKSFLDYGSPKEFLNKGDYLRGKKSYSGKNFL*RGF 632
            ASTQCFLH +HAL ++PARTSS    V + KP Q++CRAQKQ    +  +AVSRRLALT+LIG AA+GSKVSPADAAYGE+ANVFGKPK               Q P    P+KE EF GQVL  ++NFD  S++ V +T T+KKS  DYGSP+EFL+K DYL GK++Y GK     GF
Sbjct:    3 ASTQCFLHQYHALRSSPARTSS----VPSPKPNQLICRAQKQDDANNTSNAVSRRLALTLLIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQIPAKWNPSKEIEFPGQVLRYEDNFDSTSNLMVAVTPTDKKSITDYGSPEEFLSKVDYLLGKQAYFGKTDSEGGF 177          
BLAST of EY665425 vs. ExPASy Swiss-Prot
Match: PSBP_SPIOL (Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia oleracea GN=PSBP PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.893e-45
Identity = 104/184 (56.52%), Postives = 129/184 (70.11%), Query Frame = 3
Query:   96 MASTQCFLHHHALSTTPA--RTSSSQRHVS-NIKPTQIVCRAQKQAVQEDD--GSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTTLTS*HTMEMDSSCQFPQNETPAKEREFLGQVL*IKNNFDPNSHVSVLITQTEKKSFLDYGSPKEFLNKGDYLRGKKSYSGKNFL*RGF 632
            MAST CFLHHHA  ++PA  R S++QR+ + +IKP QIVC+AQKQ   E +   S VSRRLALTVLIGAAAVGSKVSPADAAYGE+ANVFGKPK                 P    P+KE+EF GQVL  ++NFD  S++SVL+  T+KKS  D+GSP++FL++ DYL GK++Y GK     GF
Sbjct:    1 MASTACFLHHHAAISSPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDDNEANVLNSGVSRRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSKEKEFPGQVLRYEDNFDATSNLSVLVQPTDKKSITDFGSPEDFLSQVDYLLGKQAYFGKTDSEGGF 184          
BLAST of EY665425 vs. ExPASy Swiss-Prot
Match: PSBP3_TOBAC (Oxygen-evolving enhancer protein 2-3, chloroplastic OS=Nicotiana tabacum GN=PSBP3 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.893e-45
Identity = 109/185 (58.92%), Postives = 131/185 (70.81%), Query Frame = 3
Query:   96 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQ-KQAVQEDDGS---AVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTTLTS*HTMEMDS-SCQFPQNETPAKEREFLGQVL*IKNNFDPNSHVSVLITQTEKKSFLDYGSPKEFLNKGDYLRGKKSYSGKNFL*RGF 632
            MASTQCFLHHHALST PARTS  +  V ++K  Q+ VCRAQ KQ+  + D     +VSRRLALT+LIGAAAVGSKVSPADAAYGE+ANVFGKPKT  T   T   D    Q P    P KE E+ GQVL  ++NFD  S+V V IT T+KKS  D+GSP++FL++ DYL G+++YSGK     GF
Sbjct:    1 MASTQCFLHHHALST-PARTSLVRGIVPSLKSNQLLVCRAQNKQSAPQQDNVNSVSVSRRLALTLLIGAAAVGSKVSPADAAYGEAANVFGKPKTD-TDFQTYNGDGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQVDYLLGRQAYSGKTDSEGGF 183          
BLAST of EY665425 vs. ExPASy Swiss-Prot
Match: PSBP_PEA (Oxygen-evolving enhancer protein 2, chloroplastic OS=Pisum sativum GN=PSBP PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.031e-44
Identity = 105/179 (58.66%), Postives = 121/179 (67.60%), Query Frame = 3
Query:   96 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTTLTS*HTMEMDSSCQFPQNETPAKEREFLGQVL*IKNNFDPNSHVSVLITQTEKKSFLDYGSPKEFLNKGDYLRGKKSYSGKNFL*RGF 632
            MASTQCFLHH    TTP RT S QR V   KP  IVC+AQKQ    D  + VSRRLAL+VLIGAAAVGSKVSPADAAYGE+ANVFGK KT                P    P+KEREF GQVL  ++NFD  S+VSVL+  T+KKS  DYGSP+EFL+K DYL GK+++ G+     GF
Sbjct:    1 MASTQCFLHHQYAITTPTRTLS-QRQVVTTKPNHIVCKAQKQDDVVD--AVVSRRLALSVLIGAAAVGSKVSPADAAYGEAANVFGKAKTNTDYLPYNGDGFKLLVPAKWNPSKEREFPGQVLRYEDNFDATSNVSVLVQTTDKKSITDYGSPEEFLSKVDYLLGKQAFFGQTDSEGGF 176          
BLAST of EY665425 vs. ExPASy Swiss-Prot
Match: PSBP_SOLLC (Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum lycopersicum GN=PSBP PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.297e-44
Identity = 105/181 (58.01%), Postives = 126/181 (69.61%), Query Frame = 3
Query:   99 ASTQCFLH-HHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGS--AVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTTLTS*HTMEMDSSCQFPQNETPAKEREFLGQVL*IKNNFDPNSHVSVLITQTEKKSFLDYGSPKEFLNKGDYLRGKKSYSGKNFL*RGF 632
            ASTQCFLH +HAL ++PARTSS    VS+ KP Q++CRAQKQ    DD S  AVSRRLALT+LIG AA+GSKVSPADAAYGE+ANVFGKPK               Q P    P+KE E+ GQVL  ++NFD  S++ V +T T+KKS  DYGSP+EFL+K DYL GK++Y GK     GF
Sbjct:    3 ASTQCFLHQYHALRSSPARTSS----VSSPKPNQLICRAQKQ----DDASNAAVSRRLALTLLIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQVPAKWNPSKEVEYPGQVLRYEDNFDSTSNLIVAVTPTDKKSITDYGSPEEFLSKVDYLLGKQAYFGKTDSEGGF 175          
BLAST of EY665425 vs. ExPASy Swiss-Prot
Match: PSBP_FRIAG (Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria agrestis GN=PSBP PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.489e-43
Identity = 100/184 (54.35%), Postives = 126/184 (68.48%), Query Frame = 3
Query:   96 MASTQCFLHHHALSTTPARTSSSQRH--VSNIKPTQIVCRAQKQA-VQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTTLTS*HTMEMDSSCQFPQNETPAKEREFLGQVL*IKNNFDPNSHVSVLITQTEKKSFLDYGSPKEFLNKGDYLRGKKSYSGKNFL*RGFPP 638
            MAS+ CFL HHA ST PA TS +  H  V  IKP+Q++CRAQK +   E+  +AVSRRLALT+LIG+AAVG+K++PA+AAYGE+ANVFGK KT            +   P    P+KE EF GQVL  ++NFD  S+VSV +T T KKS  DYG+P+EFL+  DYL GK++YSGK     GF P
Sbjct:    1 MASSACFLLHHAPST-PATTSRTPSHRLVPTIKPSQLICRAQKSSDTDENSSTAVSRRLALTILIGSAAVGTKIAPANAAYGEAANVFGKAKTNTDFLPYTGDGFNLLIPAKWNPSKEVEFPGQVLRYEDNFDVTSNVSVTVTPTSKKSITDYGTPEEFLSTVDYLLGKQAYSGKTASEGGFDP 183          
The following BLAST results are available for this feature:
BLAST of EY665425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
PSBP1_TOBAC1.390e-4960.00Oxygen-evolving enhancer protein 2-1, chloroplasti... [more]
PSBP_CUCSA2.007e-4859.56Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP2_TOBAC2.898e-4759.78Oxygen-evolving enhancer protein 2-2, chloroplasti... [more]
PSBP1_ARATH4.185e-4656.04Oxygen-evolving enhancer protein 2-1, chloroplasti... [more]
PSBP_SOLTU3.543e-4556.98Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_SPIOL7.893e-4556.52Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP3_TOBAC7.893e-4558.92Oxygen-evolving enhancer protein 2-3, chloroplasti... [more]
PSBP_PEA1.031e-4458.66Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_SOLLC2.297e-4458.01Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_FRIAG1.489e-4354.35Oxygen-evolving enhancer protein 2, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-007-G07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665425 ID=EY665425; Name=EY665425; organism=Citrus sinensis; type=EST; length=899bp
TACGAATGATTTTTTTTCCTTATTACTTTTATAATTGTTAGTGAAGCCTT
TAGTGAACGAAAAAAAAAAAAAAAGGAAGAGAGCGAAAAGAAAAAATGGC
TTCAACTCAATGCTTCTTGCACCACCATGCACTCTCTACTACACCAGCAA
GAACATCATCATCTCAGCGCCACGTGTCAAACATCAAGCCCACCCAGATT
GTCTGCCGTGCGCAGAAGCAAGCTGTCCAAGAAGATGACGGCAGCGCCGT
CTCCCGCCGTTTGGCTCTGACGGTGCTCATTGGTGCTGCTGCCGTCGGCT
CCAAGGTCTCTCCTGCCGACGCTGCCTACGGTGAATCTGCCAATGTGTTT
GGTAAGCCAAAGACCACACTGACTTCTTAGCATACAATGGAAATGGATTC
AAGCTGTCAATTCCCTCAAAATGAAACCCCAGCAAAAGAGAGAGAGTTCC
TTGGTCAAGTTCTTTAAATAAAAAACAACTTTGATCCCAACAGCCATGTC
TCCGTCTTAATCACCCAAACTGAAAAAAAATCCTTCCTGGACTACGGTTC
CCCCAAAGAATTCCTCAATAAGGGGGACTACTTGCGGGGAAAAAAAAGCT
ATTCCGGGAAAAACTTCCTCTGAAGGGGGTTTCCACCCCGGAAGCGGGGG
CAACACCAAAATTTTGGAGAGGTCCACCCAAACACCCATATCATTTTTGG
TTGTATATAAAAAAATCGCGGAAGGAAAAAAAGGGGGGACCCCCACCCAT
TTACCCCCCCGGTATAGGGGGGAAATTTTTAATTCCCCAGGGCCACCCTG
GAAAAAAAAGGGGGTTAAAGGGAAAAAAAAAATATTGGAAACCCCGGCCA
TTTTTTTCCGGTGGCTTGGAAATATAACAAAATTTTTTATAAAACCCAA
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