CV885198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885198 vs. ExPASy Swiss-Prot
Match: LIGA_BOVIN (Ligatin OS=Bos taurus GN=LGTN PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.995e-33 Identity = 98/299 (32.78%), Postives = 160/299 (53.51%), Query Frame = -1 Query: 67 STLWSNHILPCRPSGITLDIKKSSHKKLTKWLQAKSSAGLISVKEDKYKKESMLFSVNRGHPDYLSFK-PEKRPAEKASQAVDHAASDNIQPAKILEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDVVFNYIEKDNLVKPTDKSIVVLDPTLCDALFKGAIKKGTTYPTEIHKKDLGSTFVNRMQ-AHHVVTRGSQSVVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPG-KKGQEVLIQGGVIADVAKHLVEQFGIPKRYIEVLDKTAR 954 STL +H+ C P G LDIKKSS+KKL+K+LQ +I V+E ES++ +V+ HP SF PE P SQ + + + QP ++ +Y + +F G G + SE V NY +K++LV +K++V LDP LCD + + K T++ L + ++Q A+ V G + +V+KG + I I ++ NKK+T + LE + +DP ++A+ LQ++ STTV PG K +V IQG I + + L+E++ +P+++I+ L+K + Sbjct: 285 STLLGSHMFSCCPEGRQLDIKKSSYKKLSKFLQHMQQEQIIQVQELSKGVESIV-AVDWKHPRITSFVIPEPSPT---SQTIQEGSRE--QPYHPPDIKPLYCVPASMTLLFQESGHKKGSVLEGSEVRTFVINYAKKNDLVDADNKNLVKLDPILCDCILE---KDEQHTVTKLPWDSLLGRCLEKLQPAYQVTFPGQEPIVKKGRICPIDITLAQKASNKKVTVVRNLEAYGLDPRSVAATLQQRCQASTTVTSAPGLKDSVQVQIQGNQIHHLGRLLLEEYRLPRKHIQGLEKAPK 574
BLAST of CV885198 vs. ExPASy Swiss-Prot
Match: LIGA_PONAB (Ligatin OS=Pongo abelii GN=LGTN PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.206e-32 Identity = 97/299 (32.44%), Postives = 158/299 (52.84%), Query Frame = -1 Query: 67 STLWSNHILPCRPSGITLDIKKSSHKKLTKWLQAKSSAGLISVKEDKYKKESMLFSVNRGHPDYLSFK-PEKRPAEKASQAVDHAASDNIQPAKILEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDVVFNYIEKDNLVKPTDKSIVVLDPTLCDALFKGAIKKGTTYPTEIHKKDLGSTFVNRMQ-AHHVVTRGSQSVVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQ-EVLIQGGVIADVAKHLVEQFGIPKRYIEVLDKTAR 954 ST +H+ C P G LDIKKSS+KKL+K+LQ +I VKE ES++ +V+ HP SF PE P SQ + + + QP ++ +Y + +F G G SE +V NY +K++LV +K++V LDP LCD + + K ++ L + + ++Q A+ V G + +V+KG + I I +R NKK+T + LE + +DP ++A+ LQ++ STTV PG K +V IQG + + L+E++ +P+++I+ L+K + Sbjct: 290 STFLGSHMFSCCPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIV-AVDWKHPRITSFVIPEPSPT---SQTIQEGSRE--QPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAKKNDLVDADNKNLVRLDPILCDCILE---KNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQEPIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGAKDSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALK 579
BLAST of CV885198 vs. ExPASy Swiss-Prot
Match: LIGA_HUMAN (Ligatin OS=Homo sapiens GN=LGTN PE=1 SV=3) HSP 1 Score: 139.813 bits (351), Expect = 2.206e-32 Identity = 97/299 (32.44%), Postives = 158/299 (52.84%), Query Frame = -1 Query: 67 STLWSNHILPCRPSGITLDIKKSSHKKLTKWLQAKSSAGLISVKEDKYKKESMLFSVNRGHPDYLSFK-PEKRPAEKASQAVDHAASDNIQPAKILEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDVVFNYIEKDNLVKPTDKSIVVLDPTLCDALFKGAIKKGTTYPTEIHKKDLGSTFVNRMQ-AHHVVTRGSQSVVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQ-EVLIQGGVIADVAKHLVEQFGIPKRYIEVLDKTAR 954 ST +H+ C P G LDIKKSS+KKL+K+LQ +I VKE ES++ +V+ HP SF PE P SQ + + + QP ++ +Y + +F G G SE +V NY +K++LV +K++V LDP LCD + + K ++ L + + ++Q A+ V G + +V+KG + I I +R NKK+T + LE + +DP ++A+ LQ++ STTV PG K +V IQG + + L+E++ +P+++I+ L+K + Sbjct: 290 STFLGSHMFSCCPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIV-AVDWKHPRITSFVIPEPSPT---SQTIQEGSRE--QPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAKKNDLVDADNKNLVRLDPILCDCILE---KNEQHTVMKLPWDSLLTRCLEKLQPAYQVTLPGQEPIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGAKDSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALK 579
BLAST of CV885198 vs. ExPASy Swiss-Prot
Match: LIGA_RAT (Ligatin OS=Rattus norvegicus GN=Lgtn PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 2.064e-30 Identity = 94/299 (31.44%), Postives = 159/299 (53.18%), Query Frame = -1 Query: 67 STLWSNHILPCRPSGITLDIKKSSHKKLTKWLQAKSSAGLISVKEDKYKKESMLFSVNRGHPDYLSF-KPEKRPAEKASQAVDHAASDNIQPAKILEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDVVFNYIEKDNLVKPTDKSIVVLDPTLCDALFKGAIKKGTTYPTEIHKKDLGSTFVNRMQ-AHHVVTRGSQSVVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQ-EVLIQGGVIADVAKHLVEQFGIPKRYIEVLDKTAR 954 STL +H+ C P G LDIKKSS+KKL+K+LQ ++ VKE ES++ +V+ HP SF PE ASQ V + + +P ++ +Y ++ +F G G SE ++ +Y +++NLV ++++V LDP LCD + + K ++ L + + +Q A+ V G + +++KG L I I + NKK+T + LET+ +DP ++A+ LQ++ ST V+ PG K +V +QG I + + L+E++ +P +YI+ L+K + Sbjct: 277 STLLGSHMFSCCPEGQQLDIKKSSYKKLSKFLQHMQQEQIVQVKELSKGVESIV-AVDWRHPRITSFIVPEP---SLASQTVQEGSRE--KPYLPPDIKSLYCVPANMTQLFLESGHKKGSTLEGSEVRRIITDYAKRNNLVDADNRNLVKLDPILCDCILE---KNEQHLVMKLPWDSLLTRCLKNLQPAYQVTFPGQEPIIKKGKLCPIDITLVLKTYNKKVTVVRNLETYGLDPCSVAAILQQRCQASTIVSPAPGAKDSLQVQVQGNQIHHLGQLLLEEYRLPGKYIQGLEKAPK 566
BLAST of CV885198 vs. ExPASy Swiss-Prot
Match: LIGA_MOUSE (Ligatin OS=Mus musculus GN=Lgtn PE=2 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 2.064e-30 Identity = 94/299 (31.44%), Postives = 156/299 (52.17%), Query Frame = -1 Query: 67 STLWSNHILPCRPSGITLDIKKSSHKKLTKWLQAKSSAGLISVKEDKYKKESMLFSVNRGHPDYLSFK-PEKRPAEKASQAVDHAASDNIQPAKILEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDVVFNYIEKDNLVKPTDKSIVVLDPTLCDALFKGAIKKGTTYPTEIHKKDLGSTFVNRMQ-AHHVVTRGSQSVVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQ-EVLIQGGVIADVAKHLVEQFGIPKRYIEVLDKTAR 954 STL +H+ C P G LDIKKSS+KKL+K+LQ ++ VKE ES++ +V+ HP SF PE + Q V QP ++ +Y ++ +F G G SE ++ +Y +++ LV ++++V LDP LCD + + K T++ L + + MQ A+ V G + +++KG L I I + NKK+T + LET+ +DP ++A+ LQ++ ST V+ PG K +V +QG I + + L+E++ +P +YI+ L+K + Sbjct: 277 STLLGSHMFSCCPEGQQLDIKKSSYKKLSKFLQHMQQEQIVQVKELSKGVESIV-AVDWRHPRITSFVIPEPSLTSQTVQEVSRE-----QPYLPPDIKSLYCVPANMTQLFLESGHKKGSTLEGSEVRKIITDYAKRNRLVDADNRNLVKLDPILCDCILE---KNEQHLVTKLPWDCLLTRCLKNMQPAYQVTFPGQEPILKKGKLCPIDITLALKTYNKKVTVVRNLETYGLDPCSVAAILQQRCQASTIVSPAPGAKDSLQVQVQGNQIHHLGQLLLEEYRLPGKYIQGLEKAPK 566
BLAST of CV885198 vs. ExPASy Swiss-Prot
Match: TMA64_YEAST (Translation machinery-associated protein 64 OS=Saccharomyces cerevisiae GN=TMA64 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.652e-19 Identity = 80/305 (26.23%), Postives = 139/305 (45.57%), Query Frame = -1 Query: 64 STLWSNHILPCRP--SGITLDIKKSSHKKLTKWLQAKSSAGLISVKEDKYKKESMLFSVNRGHPDYLSFKPEKRPAEKASQAVDHAASDNIQPAKILEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDVVFNYIEKDNLVKPTDKSIVVLDPTLCDALFKGAIKKGTTYPTEIHKKD--LGSTFVNRMQAHHVVTRGSQSVV----RKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVLIQGGVIADVAKHLVEQFGIPKRYIEVLDKTARK 954 S SNHI+ P +++KK+S KK K+L+ G + +K + + N + +F P K K++ + + + + ++ +YKP + V + YT + V YI NL DK V++D L D + K KK + I + L N + + + +++ KG+L I+I+TE + G K +T++S E F +DPE+LA++L+K + STT++E K EV +QG + HL + GIP ++I+ +K +K Sbjct: 264 SNFISNHIMRNLPPIDHNEVNVKKTSWKKSAKFLKHFEKEGFLKLKGKG--DDLTIVGKNTDKDELKNFVPYKLGCSKSATESRESTTSKEKTSGMMYSLTLYKPFNLAKDLLKEVNLASHTYYTSQDIRSAVSQYISVKNLADTKDKGKVIMDDLLFDMVNK---KKKVLNASRIIARGEILHPLLTNNFTEFYQIFKSDDTLLFKAPMKGSLPHIKIITEMKIGRKVITRVSNFEVFQVDPESLAADLRKICSGSTTISESQTFKCAEVQVQGPHGQSIIDHL-NKLGIPSKWIDFENKLKKK 562 The following BLAST results are available for this feature:
BLAST of CV885198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885198 ID=CV885198; Name=CV885198; organism=Citrus sinensis; type=EST; length=954bpback to top |