CV885168

Overview
NameCV885168
Unique NameCV885168
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3768 contig Csv1_Contig3768:30..884. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 375.555 bits (963), Expect = 2.005e-103
Identity = 188/242 (77.69%), Postives = 208/242 (85.95%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIR--QDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGW 847
            IGVNYGQVADNLPPP+ T KLLQSTSIQK+RLYGADPAIIKALA TGVGIVIGA++GD+P+LASDPNAATQWINSNVLPFYPASKI+LITVGNE+++SND NL++Q               SLGGKIKVSTV++M+VL  SDPPSSGSF    Q  ++GILQFL D GSPF INPYPFFAYQSDPRPETLAFCLF+PNAGRVDS TGIKY NMFDAQVDAVHSAL +MGF+ VEIVVAETGW
Sbjct:   26 IGVNYGQVADNLPPPSETVKLLQSTSIQKVRLYGADPAIIKALAGTGVGIVIGAANGDVPSLASDPNAATQWINSNVLPFYPASKIMLITVGNEILMSNDPNLVNQLLPAMQNVQKALEAVSLGGKIKVSTVNSMTVLGSSDPPSSGSFAAGYQTGLKGILQFLSDTGSPFAINPYPFFAYQSDPRPETLAFCLFEPNAGRVDSKTGIKYTNMFDAQVDAVHSALKSMGFEKVEIVVAETGW 267          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E1311_ARATH (Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.833e-54
Identity = 108/243 (44.44%), Postives = 147/243 (60.49%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            IGVNYGQ+ DNLP P     L++S    K++LY A+P I+KA +NTG+  +IG  +  +  +  DP+ A  WI  NV PF PA+ I  IT+GNE++  ND +L +                 L  +I V+T H++S+L  S PPS+G F     D++  IL+F +   SPF IN YPFFAY+ +P+   L F LFQPN G VD  TG  Y NM  AQ+DAV+SAL A GFK + + ++ETGWP
Sbjct:   29 IGVNYGQIGDNLPSPTDVIPLIKSIGATKVKLYDANPQILKAFSNTGIEFIIGLGNEYLSKM-KDPSKALTWIKQNVTPFLPATNITCITIGNEILALNDSSLTTNLLPAMQGVHSALITAGLSDQISVTTAHSLSILKSSFPPSAGEFQPDLLDSLTPILEFHRKTDSPFLINAYPFFAYKGNPKEVPLDFVLFQPNQGIVDPATGFHYDNMLFAQIDAVYSALAAAGFKSLRVEISETGWP 270          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500/F10A12.18 PE=1 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.560e-47
Identity = 94/243 (38.68%), Postives = 144/243 (59.26%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            +G+NYGQ+A+NLP PA  A LL+S +I +++LY ADP ++ + +N+ V  +IG  +  +  +++DP  A  W+   + P    ++I  I VGNE+  +ND  LI                  L  ++ V++ H++ +L+ S PPSSGSF  +    ++ +L F     SPF IN YPFFAY+  P+   L + LFQPN G VD  T + Y NM  AQVDA++SA+  +G  D+E+ ++ETGWP
Sbjct:   29 VGINYGQIANNLPSPARVAVLLRSLNITRVKLYDADPNVLFSFSNSQVDFMIGLGNEYLQNMSTDPTKAQDWLQQRLEPHISKTRITSIVVGNEIFKTNDHVLIQSLLPAMKSVYAALTNLGLEKQVTVTSAHSLDILSTSYPPSSGSFKEEFIQYLQPLLDFHSQIESPFLINAYPFFAYKDSPKEVPLEYVLFQPNQGMVDPNTNLHYDNMLFAQVDALYSAIKTLGHTDIEVRISETGWP 271          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.037e-47
Identity = 107/245 (43.67%), Postives = 143/245 (58.37%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMG--FKDVEIVVAETGWP 850
            IG+NYGQVA+NLPPP     LL+S    K++LY ADP  ++A A +G  + + A   +  A  SDP  A  W+  NV  + P +KI+ I VGNEV+ SN   L +                 L  +I V+T H++++L  S PPS+ SF R    ++  IL F    GSP  IN YPFFAY+ +P+  +L F LFQPN G  D G+   Y NM  AQVDAV+ AL+A+G  +K V IVV+ETGWP
Sbjct:   27 IGINYGQVANNLPPPKNVIPLLKSVGATKVKLYDADPQALRAFAGSGFELTV-ALGNEYLAQMSDPIKAQGWVKENVQAYLPNTKIVAIVVGNEVLTSNQSALTAALFPAMQSIHGALVDCGLNKQIFVTTAHSLAILDVSYPPSATSFRRDLLGSLTPILDFHVKTGSPILINAYPFFAYEENPKHVSLDFVLFQPNQGFTDPGSNFHYDNMLFAQVDAVYHALDAVGISYKKVPIVVSETGWP 270          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.321e-46
Identity = 95/243 (39.09%), Postives = 155/243 (63.79%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT--MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            IG+ YG+ ADNLP P   ++L+Q  +I+ +R+Y A+  ++KA ANTG+ ++IG  + D+ A A   +    W+++N+LP+YP++KI  I+VG EV  + D N                    L  KIK+S+ H++++L++S PPSS SF ++ +  ++ +L+FL ++ SPF I+ YP++AY+       L + LF+ ++  VD  TG+ Y NMFDAQ+DA++ AL AM FK V+++V E+GWP
Sbjct:   27 IGICYGRNADNLPSPNRVSELIQHLNIKFVRIYDANIDVLKAFANTGIELMIGVPNADLLAFAQFQSNVDTWLSNNILPYYPSTKITSISVGLEVTEAPD-NATGLVLPAMRNIHTALKKSGLDKKIKISSSHSLAILSRSFPPSSASFSKKHSAFLKPMLEFLVENESPFMIDLYPYYAYRDSTEKVPLEYALFESSSQVVDPATGLLYSNMFDAQLDAIYFALTAMSFKTVKVMVTESGWP 268          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.725e-46
Identity = 100/249 (40.16%), Postives = 147/249 (59.04%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQS-TSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDP---NAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDP-PSSGSF---IRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            IGVNYG  ADNLP P + A  L + T+I +++L+ A+P  I A A T + + +   +  +PALA      +AA  WI +N+ P+ PA+ + L+  GNE+++S D NLI                  L G ++V+T H + +LA SD  PS+ SF           +LQF +D GSPF +NPYP+F+Y    RPETL + LF+PN+G  D  T + Y +M DAQ+DA+++A+  +G+ DV+I V E GWP
Sbjct:   26 IGVNYGANADNLPSPTSVATFLATKTTIDRVKLFDANPTFISAFAGTPISLAVSLPNSALPALADKATGLDAARSWIRANLSPYVPATNVTLLLAGNEILLSTDTNLILSLLPAMRRLAQALKAEGLTG-VRVTTPHYLGILAPSDGIPSNASFRAGYNTKLFPAMLQFHRDTGSPFMVNPYPYFSY----RPETLNYALFRPNSGIYDPATKLNYTSMLDAQMDAIYTAMKKLGYGDVDIAVGEAGWP 269          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.697e-44
Identity = 90/243 (37.04%), Postives = 146/243 (60.08%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT--MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            +GV YG+ AD+LP P+   +L+Q  +I+ +R+Y  +  ++KA  NT + ++IG  + D+ A +   +    W+ ++VLP+YP +KI  ITVG E       N  S                 L  +IKVST  ++ +L++S PPS+G+F       +R +L+FL ++ SPF I+ YP++AY+  P   +L + LF+ ++  +D  TG+ Y NMFDAQVDA++ AL A+ F+ ++I+V ETGWP
Sbjct:   26 VGVCYGRSADDLPTPSKVVQLIQQHNIKYVRIYDYNSQVLKAFGNTSIELMIGVPNSDLNAFSQSQSNVDTWLKNSVLPYYPTTKITYITVGAESTDDPHINASSFVVPAMQNVLTALRKVGLSRRIKVSTTLSLGILSRSFPPSAGAFNSSYAYFLRPMLEFLAENKSPFMIDLYPYYAYRDSPNNVSLDYVLFESSSEVIDPNTGLLYKNMFDAQVDALYYALTALNFRTIKIMVTETGWP 268          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E13D_HORVU (Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.949e-38
Identity = 93/243 (38.27%), Postives = 135/243 (55.56%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKII-LITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRV-DSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            IGV YG +A+NLPP     +L +S  I  +R+Y   P  I+AL  +G+ +++G ++ D+  LA   +AAT W+++NV P++ A   I  I VGNE+     Q++++                 LGG IKVST     V+  S PPSS  F  Q  M  I + L    +P   N YP+FAY  +PR   L +  FQP A  V D+G G+ Y N+F+A VDA+++AL   G   V +VV+E+GWP
Sbjct:    1 IGVCYGIIANNLPPRREVVQLYRSKGITNMRIYSVQPQAIRALHGSGIRLMLGTTNNDVAVLAGSLSAATSWVHANVKPYHSAGVTIRYIAVGNEITGGAAQSILA----AMRNLNKALAAARLGG-IKVSTAVRFDVITNSFPPSSAVF-AQPYMVDIARHLASTNAPLLANVYPYFAYSGNPRDIKLNYATFQPGATPVRDAGNGLIYTNLFNAMVDAMYAALEKAGAPSVRVVVSESGWP 237          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: E13F_HORVU (Putative glucan endo-1,3-beta-glucosidase GVI (Fragment) OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.258e-37
Identity = 88/244 (36.07%), Postives = 133/244 (54.51%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSAL-NAMGFKDVEIVVAETGWP 850
            IGVNYG +  +LP P     L ++ +I  +R++  D  +++AL N+G+G+V+G  + D+  LASD + A  W++S V PF  A     I  GNEV+      L+                 + G  + V+T  A SVL  S PPS G+F      T+  I+  L   G+P  +N YP+FAY +DP    L + L   +A    +  G++Y NMFDA +DAV++A+  A G + +E+VV+ETGWP
Sbjct:    7 IGVNYGMMGSDLPSPDKVVALYKANNITDVRIFHPDTNVLEALRNSGLGVVLGTLNSDLAPLASDASYAASWVHSYVQPFAGAVSFRYINAGNEVIPGESAALV-----LPAMKNLEAALQAAGLSVPVTTAMATSVLGTSYPPSQGTFSEAALPTVGPIVSHLASSGTPLLVNVYPYFAYSADPSSVRLDYALLSSSAAVAVTDNGVEYANMFDAILDAVYAAVEKAGGGESLELVVSETGWP 245          
BLAST of CV885168 vs. ExPASy Swiss-Prot
Match: GUB_NICPL (Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3)

HSP 1 Score: 153.295 bits (386), Expect = 1.618e-36
Identity = 88/246 (35.77%), Postives = 138/246 (56.10%), Query Frame = 2
Query:  128 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF-QPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWP 850
            +GV YG + +NLPP +   +L +S +I+++RLY  + A ++AL  + + +++G  + D+  +A++P+ A  W+  NV  F+PA K   I VGNEV  ++   +L                   L   IKVS+   M+++  S PPS GSF R D    +  I+ F++   SP  +N YP+F+Y  +PR  +L + LF  PN    D   G  Y N+FDA  DAV++AL+  G   +EIVV+E+GWP
Sbjct:   33 VGVCYGMLGNNLPPASQVVQLYKSKNIRRMRLYDPNQAALQALRGSNIEVMLGVPNSDLQNIAANPSNANNWVQRNVRNFWPAVKFRYIAVGNEVSPVTGTSSLTRYLLPAMRNIRNAISSAGLQNNIKVSSSVDMTLIGNSFPPSQGSF-RNDVRSFIDPIIGFVRRINSPLLVNIYPYFSYAGNPRDISLPYALFTAPNVVVQDGSLG--YRNLFDAMSDAVYAALSRAGGGSIEIVVSESGWP 275          
The following BLAST results are available for this feature:
BLAST of CV885168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
E137_ARATH2.005e-10377.69Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E1311_ARATH3.833e-5444.44Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis... [more]
E1314_ARATH1.560e-4738.68Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... [more]
E1310_ARATH2.037e-4743.67Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... [more]
E1312_ARATH1.321e-4639.09Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E13B_WHEAT1.725e-4640.16Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E1313_ARATH4.697e-4437.04Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E13D_HORVU2.949e-3838.27Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vu... [more]
E13F_HORVU4.258e-3736.07Putative glucan endo-1,3-beta-glucosidase GVI (Fra... [more]
GUB_NICPL1.618e-3635.77Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013A10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T7_A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885168 ID=CV885168; Name=CV885168; organism=Citrus sinensis; type=EST; length=855bp
CAATTTCACTTTCTTCTCCATCTATTTCTCTCTGTCCATGGCCAAGGCCA
ACTCCAACTCCTCACTCTTCCTCTTCGTCTCTCTCCTCCTTTTTCAAGTT
CTTCACTTCTCAAGTTCGCAGTCATTCATCGGAGTGAACTACGGCCAAGT
AGCGGATAACCTGCCCCCGCCGGCGGCTACAGCGAAGCTTCTGCAATCGA
CTTCTATACAGAAATTGAGGCTCTACGGTGCAGATCCGGCCATCATCAAA
GCACTAGCAAACACTGGGGTTGGTATTGTAATTGGCGCTTCCAGTGGAGA
TATTCCGGCTCTCGCTTCTGATCCTAACGCCGCTACTCAGTGGATCAACT
CAAACGTGTTGCCTTTTTACCCCGCCAGCAAAATAATTCTCATCACCGTT
GGGAATGAGGTGATGATATCAAATGACCAAAATCTAATCAGTCAGCTTCT
TCCGGCAATGGCAAATATGCAAAACGCTCTTAACGCGGCCTCACTTGGTG
GGAAAATTAAGGTGTCAACGGTTCATGCGATGTCCGTGTTGGCACAATCC
GACCCGCCGTCCTCCGGGTCATTCATCCGCCAAGACACTATGAGAGGGAT
TTTGCAGTTTCTTAAAGACCACGGCTCCCCTTTTACCATCAACCCGTACC
CGTTTTTCGCTTATCAAAGTGACCCGAGACCCGAGACTCTTGCCTTCTGT
TTGTTTCAACCCAACGCGGGACGAGTTGACTCCGGGACCGGGATCAAATA
CATGAACATGTTCGACGCCCAGGTTGATGCTGTACATTCAGCCTTGAATG
CAATGGGGTTCAAGGATGTCGAGATTGTGGTTGCAGAGACAGGGTGGCCT
TACCG
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