EY665371

Overview
NameEY665371
Unique NameEY665371
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1039
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665371_ssr454 microsatellite EY665371_ssr454:454..465. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665371 vs. ExPASy Swiss-Prot
Match: CIPK6_ARATH (CBL-interacting serine/threonine-protein kinase 6 OS=Arabidopsis thaliana GN=CIPK6 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.743e-29
Identity = 64/92 (69.57%), Postives = 77/92 (83.70%), Query Frame = 2
Query:   98 TTRPASSVISRFEEVAKAV-KFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMST 370
            T+RPASSVIS  EE A+   KF+V+ SESRVR++G+++GRKGKLA+ A+IFAV PS +VVEVKKD+GDTLEYN FCS  LRPALKDI W ST
Sbjct:  348 TSRPASSVISSLEEAARVGNKFDVRKSESRVRIEGKQNGRKGKLAVEAEIFAVAPSFVVVEVKKDHGDTLEYNNFCSTALRPALKDIFWTST 439          
BLAST of EY665371 vs. ExPASy Swiss-Prot
Match: CIPK5_ORYSJ (CBL-interacting protein kinase 5 OS=Oryza sativa subsp. japonica GN=CIPK5 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.497e-24
Identity = 51/97 (52.58%), Postives = 73/97 (75.26%), Query Frame = 2
Query:   98 TTRPASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADNPTL 388
            T +PAS+++S+ E++A+   F VK  +  V+LQG + GRKG+LAI+A+IF VTPS  VVEVKK  GDTLEY +FC+  LRP+L+DI W   +++P+L
Sbjct:  347 TQKPASAIVSKLEQIAETESFKVKKQDGLVKLQGSKEGRKGQLAIDAEIFEVTPSFFVVEVKKSAGDTLEYEKFCNKGLRPSLRDICWDGQSEHPSL 443          
BLAST of EY665371 vs. ExPASy Swiss-Prot
Match: CIPK6_ORYSJ (CBL-interacting protein kinase 6 OS=Oryza sativa subsp. japonica GN=CIPK6 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.584e-21
Identity = 57/97 (58.76%), Postives = 69/97 (71.13%), Query Frame = 2
Query:   98 TTRPASSVISRFEEVAKAVKFNVKTSESR---VRLQGQE-SGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTAD 376
            T  PAS VISR E VA      ++ ++S    VRL+G E  G KG+LA+ ADIF+V PS+LVV+VKKD GDTLEY  FCS ELRPAL+DIVW + AD
Sbjct:  348 TREPASGVISRLEGVAARGGGRMRVTKSGARGVRLEGAERGGAKGRLAVAADIFSVAPSVLVVDVKKDGGDTLEYRSFCSEELRPALQDIVWGAAAD 444          
BLAST of EY665371 vs. ExPASy Swiss-Prot
Match: CIPKK_ORYSJ (CBL-interacting protein kinase 20 OS=Oryza sativa subsp. japonica GN=CIPK20 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.756e-21
Identity = 51/100 (51.00%), Postives = 69/100 (69.00%), Query Frame = 2
Query:   98 TTRPASSVISRFEEVAKAVKFNVKTSESR--------VRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTA 373
            T +PA++++SR EE+A+   F VK  + +        V+LQG + GRKG+LAI+A+IF V+PS  VVEVKK  GDTLEY  FC+ +LRP+L DI W S A
Sbjct:  344 TGKPATAIVSRLEEIAETEHFTVKKKQKKRQEEDGMAVKLQGWKEGRKGQLAIDAEIFEVSPSCYVVEVKKTAGDTLEYQAFCNRDLRPSLNDICWTSPA 443          
BLAST of EY665371 vs. ExPASy Swiss-Prot
Match: CIPKK_ARATH (CBL-interacting serine/threonine-protein kinase 20 OS=Arabidopsis thaliana GN=CIPK20 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 4.125e-19
Identity = 46/95 (48.42%), Postives = 65/95 (68.42%), Query Frame = 2
Query:   98 TTRPASSVISRFEEVA-KAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADN 379
            T + A  ++S+FEE+A  + +FN+  S+  V+++ +  GRKG LAI+ +IF VT S  +VE KK  GDT+EY QFC  ELRP+LKDIVW    +N
Sbjct:  333 TKKDAKEIVSKFEEIATSSERFNLTKSDVGVKMEDKREGRKGHLAIDVEIFEVTNSFHMVEFKKSGGDTMEYKQFCDRELRPSLKDIVWKWQGNN 427          
BLAST of EY665371 vs. ExPASy Swiss-Prot
Match: CIPKC_ARATH (CBL-interacting serine/threonine-protein kinase 12 OS=Arabidopsis thaliana GN=CIPK12 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 5.388e-19
Identity = 48/105 (45.71%), Postives = 64/105 (60.95%), Query Frame = 2
Query:  107 PASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADNPTLGLNLEEQQI*N 421
            P S +IS+ EE+AK V F V+  + RV L+G   G KG L I A+IF +TPSL+VVEVKK  GD  EY  FC+NEL+P L+++        P     ++E  I N
Sbjct:  373 PVSKIISKLEEIAKVVSFTVRKKDCRVSLEGSRQGVKGPLTIAAEIFELTPSLVVVEVKKKGGDKTEYEDFCNNELKPKLQNLTADDVVAEPVAVSAVDETAIPN 477          
BLAST of EY665371 vs. ExPASy Swiss-Prot
Match: CIPKI_ORYSJ (CBL-interacting protein kinase 18 OS=Oryza sativa subsp. japonica GN=CIPK18 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.200e-18
Identity = 46/89 (51.69%), Postives = 64/89 (71.91%), Query Frame = 2
Query:   98 TTRPASSVISRFEEVAKAVKFNVKTSESRV-RLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVW 361
            +++ AS++IS+ E+VA   K  VK  E  V +++G   GRKG LAI+A+IF VTPS  +VE+KK+NGDTLEY      +++PALKDIVW
Sbjct:  352 SSQSASAIISKLEDVASCSKLTVKKKEGGVLKMEGASEGRKGVLAIDAEIFEVTPSFHLVEIKKNNGDTLEYQHLWKEDMKPALKDIVW 440          
BLAST of EY665371 vs. ExPASy Swiss-Prot
Match: CIPKB_ORYSJ (CBL-interacting protein kinase 11 OS=Oryza sativa subsp. japonica GN=CIPK11 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.561e-18
Identity = 49/109 (44.95%), Postives = 72/109 (66.06%), Query Frame = 2
Query:   98 TTRPASSVISRFEEVAKAVKFNVKTSESRV-RLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTAD---NPTLGLNLEEQQ 412
            T +P ++V+ + +E+AK +K  VK  ++ V RL   + G+KG L ++A+IF VTPS L+VE+KK NGDT+EY +    ++RPALKDIVW+   D   N    L  E+QQ
Sbjct:  345 TRQPVTTVLGKLKELAKRLKLKVKKKDNGVLRLAAPKEGKKGFLELDAEIFEVTPSFLLVELKKTNGDTMEYRKLVKEDIRPALKDIVWVWQGDEHLNSQSILQGEQQQ 453          
BLAST of EY665371 vs. ExPASy Swiss-Prot
Match: CIPKI_ARATH (CBL-interacting serine/threonine-protein kinase 18 OS=Arabidopsis thaliana GN=CIPK18 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.957e-18
Identity = 44/84 (52.38%), Postives = 58/84 (69.05%), Query Frame = 2
Query:  107 PASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIV 358
            P S +IS+ EE+AK V F V+  E  +RL+G   G KG L I A+IF +TPSL+VVEVKK  GD  EY +FC+ ELRP L+ ++
Sbjct:  420 PVSKIISKLEEIAKIVSFTVRKKEWSLRLEGCREGAKGPLTIAAEIFELTPSLVVVEVKKKGGDREEYEEFCNKELRPELEKLI 503          
BLAST of EY665371 vs. ExPASy Swiss-Prot
Match: CIPK2_ORYSJ (CBL-interacting protein kinase 2 OS=Oryza sativa subsp. japonica GN=CIPK2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.780e-18
Identity = 43/96 (44.79%), Postives = 67/96 (69.79%), Query Frame = 2
Query:   98 TTRPASSVISRFEEVAKAVKFNV-KTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADNP 382
            +T  AS++IS+ E++AK ++  + K     ++++G + GRKG + I+A+IF VTP+  +VE+KK NGDTLEY +  + E+RPALKDIVW    + P
Sbjct:  340 STSTASTIISKIEDIAKGLRLKLTKKDGGLLKMEGSKPGRKGVMGIDAEIFEVTPNFHLVELKKTNGDTLEYRKVLNQEMRPALKDIVWAWQGEQP 435          
The following BLAST results are available for this feature:
BLAST of EY665371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
CIPK6_ARATH5.743e-2969.57CBL-interacting serine/threonine-protein kinase 6 ... [more]
CIPK5_ORYSJ2.497e-2452.58CBL-interacting protein kinase 5 OS=Oryza sativa s... [more]
CIPK6_ORYSJ2.584e-2158.76CBL-interacting protein kinase 6 OS=Oryza sativa s... [more]
CIPKK_ORYSJ5.756e-2151.00CBL-interacting protein kinase 20 OS=Oryza sativa ... [more]
CIPKK_ARATH4.125e-1948.42CBL-interacting serine/threonine-protein kinase 20... [more]
CIPKC_ARATH5.388e-1945.71CBL-interacting serine/threonine-protein kinase 12... [more]
CIPKI_ORYSJ1.200e-1851.69CBL-interacting protein kinase 18 OS=Oryza sativa ... [more]
CIPKB_ORYSJ4.561e-1844.95CBL-interacting protein kinase 11 OS=Oryza sativa ... [more]
CIPKI_ARATH5.957e-1852.38CBL-interacting serine/threonine-protein kinase 18... [more]
CIPK2_ORYSJ7.780e-1844.79CBL-interacting protein kinase 2 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-007-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665371 ID=EY665371; Name=EY665371; organism=Citrus sinensis; type=EST; length=1039bp
AGGGGCTGCGTACGGTCGGATTCCGGGTCGACCACGCGTCCGGTCACCTT
TGTTTGAGGAGAAAAAGAGAGCGGAAAGAGAGGAGCTGAGATTTGCAACC
ACGAGGCCTGCAAGCAGTGTGATCTCAAGATTTGAAGAGGTGGCCAAGGC
CGTTAAGTTTAATGTCAAAACGAGCGAGTCAAGAGTCAGATTACAAGGCC
AAGAAAGCGGAAGGAAAGGCAAATTGGCTATCAATGCTGACATCTTTGCC
GTTACACCGTCGCTTTTGGTGGTGGAAGTGAAGAAAGATAATGGTGATAC
ATTGGAGTACAATCAATTCTGTAGCAACGAGCTTCGGCCGGCGCTTAAGG
ACATTGTCTGGATGTCAACTGCTGACAATCCCACGCTTGGCTTGAACCTG
GAGGAGCAACAAATTTAAAATTGATTGCTGATGAATTGTGGGTATATCTC
AGATGATTGATTGATTGTTGTTGATTATGGGATTTAGAGTTTGATTAATT
TGATGGTGATCATGGAATATCATTGGAAACAAAAAACAATGGGGCTGGCT
CATCATGTGTTTTGTTGTGTTCTTAGTTTTTGTTAACCTTGGTGGGGGGG
AAAGGAATTTGGTGGGCAATTGGGGGTTTTCTTAGTCTCACAAAAACATG
TTGGTCGGGTTCCGTTTCTTTTGAAATCATTCCGAAACCCACCCATGGCA
AATTTGGATTTTGTTTGGAAAATTGGTTTGATTTTTGCCCCCAAATTAAA
TAAGAAAATTTCCCAAAAAAAAAAAAAAAAAAAAAAAGGGGGCGCCCCCC
TTTAAAAAAACCCAACTTTTACACACCCCGGGTGGGGGGAAACCCCCCTA
AACCCCCTCTTTAAAGGGGGCCCCCAAAAATTCTAATTTTTCGGGGGGCG
GGGTTTTTTTAAAACGGCTCCGGGGGACTGGGGGAAAAAACCCCCGTGGG
GCTTTTTCCCCCAAAATTTTAAAAACCCCCCCCTTTTGGCGCACCCCCCC
ACCTCCCCCCCCCCTTTTTTTCCCCCCCCACCCGCGGGT
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