CV885146

Overview
NameCV885146
Unique NameCV885146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 3.701e-75
Identity = 140/183 (76.50%), Postives = 159/183 (86.89%), Query Frame = -3
Query:    8 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 556
            A+F DGKVLAVKKIDSSALP  M DDFIEMVS I+ L HPN+ +LVGYC+E+GQHL+VYEF KNGSLHDFLHL +E++K L+WNSRVKIALGTARALEYLHEVCS S+V KNIKSANILLD+ELNP LSD GLAS +P A+E L N    GY APEV+MSGQY++KSD+YSFGVVMLELLTGR
Sbjct:  433 AEFDDGKVLAVKKIDSSALPHGMTDDFIEMVSKIANLDHPNVTKLVGYCAEHGQHLVVYEFHKNGSLHDFLHLSEEESKALVWNSRVKIALGTARALEYLHEVCSPSIVDKNIKSANILLDSELNPHLSDSGLASFLPTANELL-NQTDEGYSAPEVSMSGQYSLKSDIYSFGVVMLELLTGR 614          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.399e-74
Identity = 138/183 (75.41%), Postives = 158/183 (86.34%), Query Frame = -3
Query:    8 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 556
            AQF DGKVLAVKKIDSSALP++  DDF E+VS I+ L H N+ +L GYCSE+GQHL+VYEF +NGSLHDFLHL +E++KPLIWN RVKIALGTARALEYLHEVCS S+VHKNIKSANILLD+ELNP LSD GLAS +P A+E LN +   GY APE +MSGQY++KSDVYSFGVVMLELLTGR
Sbjct:  436 AQFEDGKVLAVKKIDSSALPTDTADDFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLHLAEEESKPLIWNPRVKIALGTARALEYLHEVCSPSIVHKNIKSANILLDSELNPHLSDSGLASFLPTANELLNQN-DEGYSAPETSMSGQYSLKSDVYSFGVVMLELLTGR 617          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 4.856e-59
Identity = 114/185 (61.62%), Postives = 145/185 (78.38%), Query Frame = -3
Query:    8 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND-AGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 556
            A+F +GK++A+KKID++AL  +  D+F+E VSN+S+L HPNI+ L GYC+E+GQ LLVYE+  NG+L D LH  D+ +  L WN+RVK+ALGTA+ALEYLHEVC  S+VH+N KSANILLD ELNP LSD GLA+  PN +  ++    GS GY APE A+SG Y +KSDVY+FGVVMLELLTGR
Sbjct:  412 AEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPNTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGR 596          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 5.025e-56
Identity = 111/183 (60.66%), Postives = 137/183 (74.86%), Query Frame = -3
Query:    8 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 556
            A+F DG+  AVK+IDSS L     ++F  +VS+IS +HH N+ ELVGYCSE G+++LVYE+  +GSLH FLHL D+ +KPL WN+R++IALGTA+A+EYLHE CS  +VHKNIKS+NILLDNELNP+LSD GLA    N     + + G GY APE      Y  KSDVYSFGVVMLELLTGR
Sbjct:  432 AKFQDGRKFAVKEIDSSLLGKGNPEEFSHIVSSISSIHHKNMAELVGYCSEQGRNMLVYEYFTSGSLHRFLHLSDDFSKPLTWNTRIRIALGTAKAIEYLHETCSPPLVHKNIKSSNILLDNELNPRLSDYGLA----NFHHRTSQNLGVGYNAPECTDPSAYTQKSDVYSFGVVMLELLTGR 610          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 2.111e-54
Identity = 109/183 (59.56%), Postives = 135/183 (73.77%), Query Frame = -3
Query:    8 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 556
            A+++DG+ LAVKKIDS+   S   +    +V ++S++ H NI ELVGYCSE G ++LVYE+ +NGSLH+FLHL D  +KPL WN+RV+IALGTARA+EYLHE CS SV+HKNIKS+NILLD +LNP+LSD GL+       + L    G GY APE      Y  KSDVYSFGVVMLELLTGR
Sbjct:  421 AKYSDGRTLAVKKIDSTLFDSGKSEGITPIVMSLSKIRHQNIAELVGYCSEQGHNMLVYEYFRNGSLHEFLHLSDCFSKPLTWNTRVRIALGTARAVEYLHEACSPSVMHKNIKSSNILLDADLNPRLSDYGLSKFYLRTSQNL----GEGYNAPEARDPSAYTPKSDVYSFGVVMLELLTGR 599          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 7.770e-49
Identity = 102/186 (54.84%), Postives = 131/186 (70.43%), Query Frame = -3
Query:    8 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 556
            A+  +GK+ AVKK+D  A   +   +FIE+V+NI  + H NI+ELVGYC+E+ Q LLVYE+  NG+L D LH  DE  K L WN+RV +ALG ARALEYLHEVC   ++H+N KSAN+LLD++L+  +SDCGLA  + +   +  +    A  GYGAPE   SG Y  +SDVYSFGVVMLELLTGR
Sbjct:  502 ARLPNGKLFAVKKLDKRASEQQQDHEFIELVNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGTLQDGLHSDDEFKKKLSWNTRVSMALGAARALEYLHEVCEPPIIHRNFKSANVLLDDDLSVLVSDCGLAPLISSGSVSQLSGQLLAAYGYGAPEFD-SGIYTWQSDVYSFGVVMLELLTGR 686          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 8.890e-45
Identity = 95/186 (51.08%), Postives = 128/186 (68.82%), Query Frame = -3
Query:    8 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPN-ADEALNND--AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 556
            A+   GK+ AV+K+D  +   E    F+E+V+NI ++ H NI++LVG+CSE+ Q LL++E+ +NG+LHD LH+ D     L WN RV+IAL  A+ALEYLHE+C    +H+N KSANILLD+++   +SDCGLA  + + A   L+    A  GYGAPE    G Y +K DVYSFGVVMLELLTGR
Sbjct:  495 AELPGGKLFAVRKLDKKSPNHEEEGKFLELVNNIDRIRHANIVQLVGFCSEHSQRLLIHEYCRNGTLHDLLHIDDRLKIELSWNVRVRIALEAAKALEYLHEICDPPSIHRNFKSANILLDDDIRVHVSDCGLAPLISSGAVSQLSGQLLAAYGYGAPEFEY-GIYTMKCDVYSFGVVMLELLTGR 679          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.050e-41
Identity = 89/183 (48.63%), Postives = 125/183 (68.31%), Query Frame = -3
Query:    8 AQFADGKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 556
            A+   GK LAVKK+ ++   ++   +F+ +VSN+ +L   +I+EL+GYC+E+GQ LLVYE+  NGSL D LHL  + +K L WN R+ IALG ++AL++LHEVC   VVH+N KS+ +LLD +L+ +++D GLA  +P           +GY APEV   G Y  +SDV+S GVVMLELLTGR
Sbjct:  514 AELRHGKFLAVKKLSNTINRTQSDGEFLNLVSNVLKLKRGHILELLGYCNEFGQRLLVYEYCPNGSLQDALHLDRKLHKKLTWNVRINIALGASKALQFLHEVCQPPVVHQNFKSSKVLLDGKLSVRVADSGLAYMLPPRP----TSQMAGYAAPEVEY-GSYTCQSDVFSLGVVMLELLTGR 691          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.017e-40
Identity = 89/181 (49.17%), Postives = 121/181 (66.85%), Query Frame = -3
Query:    8 GKVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 541
            G+V+AVK++D + L      +F+  V  +S LHHPN++ L+GYC++  Q LLVYEF   GSL D LH L  D + L WN R+KIA G A+ LE+LH+  +  V++++ KS+NILLD   +P+LSD GLA   P  D++  +       GY APE AM+GQ  +KSDVYSFGVV LEL+TGR
Sbjct:  109 GQVVAVKQLDRNGLQGNR--EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGR 287          
BLAST of CV885146 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.243e-38
Identity = 82/180 (45.56%), Postives = 120/180 (66.67%), Query Frame = -3
Query:    8 KVLAVKKIDSSALPSEMCDDFIEMVSNISQLHHPNIMELVGYCSEYGQHLLVYEFRKNGSLHDFLHLLDEDNKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADE---ALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 538
            +V+A+K++D + +      +F+  V  +S   HPN+++L+G+C+E  Q LLVYE+   GSL D LH+L    KPL WN+R+KIA G AR LEYLH+  +  V+++++K +NILL  +  P+LSD GLA   P+ D+   +       GY AP+ AM+GQ   KSD+YSFGVV+LEL+TGR
Sbjct:  127 QVVAIKQLDRNGVQG--IREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGR 304          
The following BLAST results are available for this feature:
BLAST of CV885146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SRF6_ARATH3.701e-7576.50Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
SRF7_ARATH2.399e-7475.41Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
SRF8_ARATH4.856e-5961.62Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
SRF4_ARATH5.025e-5660.66Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]
SRF5_ARATH2.111e-5459.56Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
SRF3_ARATH7.770e-4954.84Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
SRF1_ARATH8.890e-4551.08Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
SUB_ARATH2.050e-4148.63Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB ... [more]
PBS1_ARATH1.017e-4049.17Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
RLCK7_ARATH1.243e-3845.56Probable serine/threonine-protein kinase RLCKVII O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012H10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885146 ID=CV885146; Name=CV885146; organism=Citrus sinensis; type=EST; length=975bp
AATGGTTACGTCCAGTAAGAAGCTCCAGCATAACAACCCCAAAACTGTAG
ACATCACTTTTTATATTATATTGACCAGACATCGCAACCTCAGGTGCACC
ATATCCAGAACCAGCATCATTGTTCAATGCCTCATCTGCATTTGGCATAT
TGCTTGCCAGGCCACAGTCAGAAAGTTGAGGATTGAGCTCGTTGTCCAGT
AATATGTTGGCCGACTTAATATTTTTGTGAACAACTGACAGTGAGCAGAC
TTCATGCAGGTACTCCAGTGCTCGTGCGGTCCCCAAAGCAATCTTGACGC
GGGAGTTCCATATCAAAGGCTTGTTGTCTTCATCCAACAGATGCAAGAAG
TCGTGCAGTGAACCATTTTTACGGAACTCATACACTAGCAGGTGCTGTCC
ATACTCTGAACAATAACCCACTAGCTCCATTATGTTCGGGTGATGCAGCT
GGGATATGTTTGAAACCATCTCGATAAAATCATCACACATTTCACTGGGA
AGGGCAGACGAATCTATTTTCTTCACTGCAAGAACCTTTCCATCGGCAAA
TTGTGCACATTGGAGACACATTGGAGATTATAACCAATGGGACATACCGC
AGCATTGAGCATCGTGCAGTTGTAAACTCTGTACAGGAAAGACTTTCCGT
TGCCACAGTTTACTCAGTGAGATATGATGGTGAAGTATATCCTGCCTCCA
GTTTGATCTCTGAAAAAACTCCTCCTTTGTTTAGAAGAGTGAGAATTGAA
GAATACTTTAGGAGCCGGTATGCTCGTGAGCTTAGGGGAAAATCTCAGCT
GGATTCCCTGAGAATTCAACATGGTCAAGGCTAGTATAAGTTTATTTCGG
ATAACTAAAGAGTTTGGTACAAAAACTCTGAAGGACCTTGCTATTGAGAT
TGTGTGTGGAACTGAAAATAAGAAATAAGTTCTATGAATACTGTGGTATA
ACCTGCCATGCTGGGATCGTTGTGT
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