EY665367

Overview
NameEY665367
Unique NameEY665367
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1036
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665367 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 3.445e-50
Identity = 110/235 (46.81%), Postives = 140/235 (59.57%), Query Frame = 2
Query:    2 REECKEDIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMNFPAGSYRWGTPSATCLNQLSWSEAFHIPMADIXXXXXXXXXXXXXXEQFATTVAGLARKLTAILAEKLGRESTFFQKNCLPSTCLP*NEQIPTMPCPFSDTRLMAPTDGDSLPIWQQNEVGGLGIKTKGERDGEGT*SGRLPLAIRKFFPGWEQ*VIKKGEPRVVTNPPEGGFQRGFLL 706
            RE+CKE IARAS++WGFFQV NHGIS D+LEKMR+EQ++VF++PFDKKSK +K   F AGSYRWGTPSAT + QLSWSEAFH+PM DI              E+FA+    LA  L  +LAEK G+ S+FF++NC+ +TC     + P  P P     LM  TD D L I  Q++VGGL +               L + I   F  W   + K  E RV+TNP    F   + +
Sbjct:   58 REKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKKSKSEK---FSAGSYRWGTPSATSIRQLSWSEAFHVPMTDI-SDNKDFTTLSSTMEKFASESEALAYMLAEVLAEKSGQNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQDQVGGLQLIKDNRWIAVKPNPKALIINIGDLFQAWSNGMYKSVEHRVMTNPKVERFSTAYFM 288          
BLAST of EY665367 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.364e-22
Identity = 64/189 (33.86%), Postives = 103/189 (54.50%), Query Frame = 2
Query:    2 REECKEDIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMNFPAGSYRWGTPSATCLNQLSWSEAFHIPMADIXXXXXXXXXXXXXXEQFATTVAGLARKLTAILAEKLGRESTFFQKNC-LPSTCLP*NEQIPTMPCPFSDT--RLMAPTDGDSLPIWQQNEVGGLGIKTKGE 559
            R+ C + +  A+++WGFFQ+ NHGI KD+ E M  E+ K+F QPF  K +E +F +    SYRWG PSAT   Q S SEAFHI ++++              E +   +A +A+ +  IL +++   S +F+    L ++ L  N+  P++   F      L+  TD   L I  Q+++GGL ++  G+
Sbjct:   56 RKRCVKQMVAAAKEWGFFQIVNHGIPKDVFEMMLLEEKKLFDQPFSVKVRE-RFSDLSKNSYRWGNPSATSPAQYSVSEAFHIILSEVSRISDDRNNLRTIVETYVQEIARVAQMICEILGKQVNVSSEYFENIFELENSFLRLNKYHPSV---FGSEVFGLVPHTDTSFLTILSQDQIGGLELENNGQ 240          
BLAST of EY665367 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.351e-12
Identity = 54/194 (27.84%), Postives = 91/194 (46.91%), Query Frame = 2
Query:    2 REECKEDIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMNFPAGSYRWGTPSATCLNQLSWSEAF---HIPMADIXXXXXXXXXXXXXXEQFATTVAGLARKLTAILAEKLGRESTFFQKNCL-PSTCLP*NEQIPTM-PCPFSD--TRLMAPTD-GDSLPIWQQNEVGGLGIKTKGE 559
            R    E +  A + WGFF++ NHGIS +L++++     K+ K  + K+ +E +F+ F + + + G        +L W   F   H+P ++I              ++FA  +  LA +L  +L E LG E  +  K    P+       ++ +  PCP  D    L A TD G  + ++Q + VGGL +   GE
Sbjct:   20 RPAAMEQLDDACENWGFFEILNHGISTELMDEVE----KMTKDHY-KRVREQRFLEFASKTLKEGCDDVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDGE 208          
BLAST of EY665367 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.351e-12
Identity = 54/194 (27.84%), Postives = 91/194 (46.91%), Query Frame = 2
Query:    2 REECKEDIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMNFPAGSYRWGTPSATCLNQLSWSEAF---HIPMADIXXXXXXXXXXXXXXEQFATTVAGLARKLTAILAEKLGRESTFFQKNCL-PSTCLP*NEQIPTM-PCPFSD--TRLMAPTD-GDSLPIWQQNEVGGLGIKTKGE 559
            R    E +  A + WGFF++ NHGIS +L++++     K+ K  + K+ +E +F+ F + + + G        +L W   F   H+P ++I              ++FA  +  LA +L  +L E LG E  +  K    P+       ++ +  PCP  D    L A TD G  + ++Q + VGGL +   GE
Sbjct:   20 RPAAMEQLDDACENWGFFEILNHGISTELMDEVE----KMTKDHY-KRVREQRFLEFASKTLKEGCDDVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDGE 208          
The following BLAST results are available for this feature:
BLAST of EY665367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
G2OX8_ARATH3.445e-5046.81Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
G2OX7_ARATH1.364e-2233.86Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]
ACCO1_ORYSJ6.351e-1227.841-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_ORYSI6.351e-1227.841-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-007-A12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665367 ID=EY665367; Name=EY665367; organism=Citrus sinensis; type=EST; length=1036bp
AAGAGAAGAGTGCAAGGAGGACATAGCTAGGGCTTCTCAGCAATGGGGTT
TTTTCCAAGTTACTAATCATGGGATTTCAAAAGATTTACTGGAGAAGATG
AGAGAAGAGCAAGTGAAAGTTTTCAAGCAGCCTTTTGATAAGAAAAGCAA
AGAAGACAAGTTCATGAATTTCCCAGCTGGCAGTTACCGCTGGGGAACAC
CATCGGCCACATGTCTCAACCAGTTATCGTGGTCCGAAGCTTTTCACATT
CCTATGGCCGATATCTCTGCTTCTGCTGCTGCTTTCACTACTCTCAGTTC
AACTCTGGAACAGTTTGCTACGACAGTGGCGGGTCTTGCCCGAAAGTTAA
CTGCAATCCTGGCGGAGAAATTAGGTCGCGAGTCAACGTTTTTCCAAAAA
AATTGCTTGCCAAGCACATGCCTACCTTAGAATGAACAGATACCCACCAT
GCCCTGTCCCTTCAGCGATACCCGGCTGATGGCCCCCACAGACGGGGATT
CCCTCCCAATATGGCAACAGAATGAGGTTGGAGGGCTTGGAATTAAGACA
AAAGGGGAAAGGGATGGCGAGGGAACCTAATCCGGAAGGCTTCCTTTGGC
AATTAGGAAATTTTTCCCAGGCTGGGAACAATGAGTTATAAAAAAGGGGG
AACCCCGCGTTGTTACAAATCCCCCCGAGGGGGGGTTCCAAAGGGGTTTT
CTTTTGGCCCTTCAAACACCCTGGGGATGAAAATCAAGACCCTCTTATGC
GGAAAGTTTGCTTCGGAAAATCAACGGGGTGTCGGGGGAAATCCAAGTTG
TTGCCGACAAGGGGCCCCCCGATCACTCAGACGAAGAAAAAATTTTCTCC
AAGTTCATAGCTGGTAGCCCCCCCCCCCCACAAAAAAACCAGAAAAAAAG
AAAACCTCTACGTGCACCGAGAGAAATATAAGTGAGGAAAAAGACCTGCA
CTATATAATGGAAAATATGAGTAGGCTTCGAGGACAGAAACAAAAGAGGG
GCACAGGGCGAAGACGACGTGCGGGGCGCGAAGCGA
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