CV885047

Overview
NameCV885047
Unique NameCV885047
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1001 contig Csv1_Contig1001:472..1043. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_BETVU (Elongation factor 2 OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 2.181e-103
Identity = 178/190 (93.68%), Postives = 185/190 (97.37%), Query Frame = 2 
Query:    2 EARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            EARP+EEGLAEAID+GRIGPRDDPK RSKIL+EE+GWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLH DAIHRGGGQ+IPTARRV YASQLTAKPRLLEPVY+VEIQAPE ALGGIYSVLN KRGHVFEEMQRPGTPLYNIKAYLPV+ESF
Sbjct:  590 EARPMEEGLAEAIDEGRIGPRDDPKNRSKILAEEYGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESF 779
[Close]
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_CHLKE (Elongation factor 2 OS=Chlorella kessleri PE=2 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 5.039e-92
Identity = 159/190 (83.68%), Postives = 178/190 (93.68%), Query Frame = 2 
Query:    2 EARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            +ARP+E+GLAEAID+G+IGPRDDPK RSKILSEEFGWDK+LAKKI  FGP+TTGPNMV D+ KGVQYLNEIKDSVVA FQWASKEG LAEENMRGI FEVCDVVLHADAIHRGGGQ+IPTARR +YA+QLTA+PRLLEPVY+VEIQ PEQA+GG+YSVLN KRG VFEE+QRPGTP++N+KAYLPVIESF
Sbjct:  592 QARPMEDGLAEAIDEGKIGPRDDPKVRSKILSEEFGWDKELAKKILAFGPDTTGPNMVTDITKGVQYLNEIKDSVVAAFQWASKEGVLAEENMRGIVFEVCDVVLHADAIHRGGGQIIPTARRSMYAAQLTAQPRLLEPVYLVEIQCPEQAMGGVYSVLNQKRGMVFEELQRPGTPIFNLKAYLPVIESF 781
[Close]
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_RAT (Elongation factor 2 OS=Rattus norvegicus GN=Eef2 PE=1 SV=4)

HSP 1 Score: 279.256 bits (713), Expect = 9.547e-75
Identity = 131/190 (68.95%), Postives = 158/190 (83.16%), Query Frame = 2 
Query:    2 EARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            +ARP  +GLAE ID G +  R + KAR++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+Y+VEIQ PEQ +GGIY VLN KRGHVFEE Q  GTP++ +KAYLPV ESF
Sbjct:  605 KARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESF 794
[Close]
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_MOUSE (Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 SV=2)

HSP 1 Score: 279.256 bits (713), Expect = 9.547e-75
Identity = 131/190 (68.95%), Postives = 158/190 (83.16%), Query Frame = 2 
Query:    2 EARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            +ARP  +GLAE ID G +  R + KAR++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+Y+VEIQ PEQ +GGIY VLN KRGHVFEE Q  GTP++ +KAYLPV ESF
Sbjct:  605 KARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESF 794
[Close]
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_MESAU (Elongation factor 2 OS=Mesocricetus auratus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 279.256 bits (713), Expect = 9.547e-75
Identity = 131/190 (68.95%), Postives = 158/190 (83.16%), Query Frame = 2 
Query:    2 EARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            +ARP  +GLAE ID G +  R + KAR++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+Y+VEIQ PEQ +GGIY VLN KRGHVFEE Q  GTP++ +KAYLPV ESF
Sbjct:  605 KARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESF 794
[Close]
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_PONAB (Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 SV=3)

HSP 1 Score: 277.33 bits (708), Expect = 3.628e-74
Identity = 130/190 (68.42%), Postives = 157/190 (82.63%), Query Frame = 2 
Query:    2 EARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            +ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+Y+VEIQ PEQ +GGIY VLN KRGHVFEE Q  GTP++ +KAYLPV ESF
Sbjct:  605 KARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESF 794
[Close]
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_HUMAN (Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 SV=4)

HSP 1 Score: 277.33 bits (708), Expect = 3.628e-74
Identity = 130/190 (68.42%), Postives = 157/190 (82.63%), Query Frame = 2 
Query:    2 EARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            +ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+Y+VEIQ PEQ +GGIY VLN KRGHVFEE Q  GTP++ +KAYLPV ESF
Sbjct:  605 KARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESF 794
[Close]
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_CALJA (Elongation factor 2 OS=Callithrix jacchus GN=EEF2 PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 3.628e-74
Identity = 130/190 (68.42%), Postives = 157/190 (82.63%), Query Frame = 2 
Query:    2 EARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            +ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+Y+VEIQ PEQ +GGIY VLN KRGHVFEE Q  GTP++ +KAYLPV ESF
Sbjct:  605 KARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESF 794
[Close]
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_BOVIN (Elongation factor 2 OS=Bos taurus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 277.33 bits (708), Expect = 3.628e-74
Identity = 130/190 (68.42%), Postives = 157/190 (82.63%), Query Frame = 2 
Query:    2 EARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            +ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+Y+VEIQ PEQ +GGIY VLN KRGHVFEE Q  GTP++ +KAYLPV ESF
Sbjct:  605 KARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEETQVAGTPMFVVKAYLPVNESF 794
[Close]
BLAST of CV885047 vs. ExPASy Swiss-Prot
Match: EF2_CRIGR (Elongation factor 2 OS=Cricetulus griseus GN=EEF2 PE=3 SV=3)

HSP 1 Score: 276.174 bits (705), Expect = 8.082e-74
Identity = 130/190 (68.42%), Postives = 157/190 (82.63%), Query Frame = 2 
Query:    2 EARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNHKRGHVFEEMQRPGTPLYNIKAYLPVIESF 571
            +ARP  +GLAE ID G +  R + KAR++ L+E++ WD   A+KIWCFGP+ TGPN++ D+ KGVQYLNEIKDSVVAGFQWA+KEGAL EENMRG+ F+V DV LHADAIHR GGQ+IPTARR +YAS LTA+PRL+EP+Y+VEIQ PEQ +GGIY VLN KRGHVFEE Q  GTP++ +KAYLPV ESF
Sbjct:  605 KARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRRGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESF 794
The following BLAST results are available for this feature:
BLAST of CV885047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
EF2_BETVU2.181e-10393.68Elongation factor 2 OS=Beta vulgaris PE=2 SV=1[more]
EF2_CHLKE5.039e-9283.68Elongation factor 2 OS=Chlorella kessleri PE=2 SV=... [more]
EF2_RAT9.547e-7568.95Elongation factor 2 OS=Rattus norvegicus GN=Eef2 P... [more]
EF2_MOUSE9.547e-7568.95Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 S... [more]
EF2_MESAU9.547e-7568.95Elongation factor 2 OS=Mesocricetus auratus GN=EEF... [more]
EF2_PONAB3.628e-7468.42Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 S... [more]
EF2_HUMAN3.628e-7468.42Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 S... [more]
EF2_CALJA3.628e-7468.42Elongation factor 2 OS=Callithrix jacchus GN=EEF2 ... [more]
EF2_BOVIN3.628e-7468.42Elongation factor 2 OS=Bos taurus GN=EEF2 PE=2 SV=... [more]
EF2_CRIGR8.082e-7468.42Elongation factor 2 OS=Cricetulus griseus GN=EEF2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012C05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885047 ID=CV885047; Name=CV885047; organism=Citrus sinensis; type=EST; length=572bp
GGAAGCCCGACCTCTGGAAGAAGGTCTTGCTGAGGCCATAGATGATGGCC
GCATTGGTCCAAGGGATGATCCCAAGGCTCGATCTAAGATCTTGTCTGAG
GAGTTCGGCTGGGACAAGGATCTTGCGAAGAAGATTTGGTGTTTTGGTCC
TGAGACCACTGGCCCTAACATGGTCGTTGATATGTGTAAGGGAGTTCAAT
ACTTGAATGAAATTAAGGATTCTGTTGTTGCTGGTTTCCAGTGGGCATCG
AAAGAAGGTGCGCTGGCTGAAGAGAACATGAGAGGTATCTGCTTTGAAGT
ATGTGATGTTGTTCTTCACGCTGATGCCATTCACAGAGGTGGTGGTCAAG
TCATTCCTACTGCTAGGAGGGTCATATATGCTTCCCAGCTCACAGCCAAG
CCCAGGCTTCTTGAGCCTGTCTACATGGTCGAAATACAGGCTCCCGAGCA
GGCCCTTGGTGGTATTTACAGTGTTCTCAATCACAAACGTGGTCACGTGT
TCGAGGAAATGCAGAGACCTGGTACCCCCCTTTACAACATCAAGGCTTAC
CTTCCCGTCATCGAGTCCTTTG
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