CV885028

Overview
NameCV885028
Unique NameCV885028
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length433
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13843 contig Csv1_Contig13843:34..466. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CV885028 vs. ExPASy Swiss-Prot
Match: Y2309_ARATH (Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 4.068e-34
Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = 1 
Query:   52 MGGGNGQKSKMAREKNMEKQRAAGKGSQLESNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLKK 285
            MGGGN QKS MAR KN+EK +AAGKGSQLE+NKKAMSIQCKVCMQTFICTTSEVKC+EHAEA+HPK+D+  CFPHLKK
Sbjct:    1 MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK 78
The following BLAST results are available for this feature:
BLAST of CV885028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2309_ARATH4.068e-3483.33Uncharacterized protein At2g23090 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012B03_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885028 ID=CV885028; Name=CV885028; organism=Citrus sinensis; type=EST; length=433bp
TTTTATTCGTAACTTAACGATTCCTGTTAGCTTCTGTGGTTTGTAAAGGA
AATGGGAGGCGGCAACGGCCAGAAATCAAAGATGGCTCGTGAGAAGAACA
TGGAGAAGCAGAGAGCAGCTGGCAAGGGGAGTCAGCTGGAGTCAAACAAG
AAAGCCATGTCCATCCAGTGCAAGGTATGCATGCAGACGTTCATTTGCAC
CACATCTGAGGTGAAGTGCAAGGAACATGCCGAAGCCAGACACCCCAAAT
CTGATTTATTTACATGTTTCCCTCATTTAAAGAAATGAAAAACCAATAAT
TTGATTATGTATTTGGAGATGGGTTTAAAGCCCTCGTCAGTATGTGTCTT
GCTGTGGGTTAAAATTAGAAAGCTTTTGGGAGAAAGAGGAATCCTTCCAG
TCTTATCAATACTAATAATTAACTATTTGCAAA
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