CV884968

Overview
NameCV884968
Unique NameCV884968
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12438 contig Csv1_Contig12438:728..1570. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884968 vs. ExPASy Swiss-Prot
Match: DRL29_ARATH (Probable disease resistance protein At4g33300 OS=Arabidopsis thaliana GN=At4g33300 PE=2 SV=2)

HSP 1 Score: 357.066 bits (915), Expect = 7.202e-98
Identity = 171/278 (61.51%), Postives = 218/278 (78.42%), Query Frame = 2
Query:    8 KECFLDLGSFPEDKKIPLEVLINMWVEIHDLDEEEAFAILVELSDRNLLKIVKDARAGDMYSSYYEISVTQHDVLRDLALHLSNQENINDRKRLLMPRRDTELPKEWERNVDQPFNAQIVSIHTGDMREMDWFRMEFPKAEVLILNFSSTEEYFLPPFIENMEKLRALIVINYSTSNAALGNFSVCSNLTNLRSLWLEKVSISQLPKSSIPLKKMQKISFVLCKINNSLDQSVVDLPKTLPCLTELTFDHCDDLMKLPPSICGLQSLKNLSVTNCHSL 841
            K+CFLDLG+FPED+KIPL+VLIN+W+E+HD+DE  AFAILV+LS +NLL + KD R G +Y+S+Y+I VTQHDVLRDLALHLSN   +N RKRLLMP+R+ +LP +WERN D+ + AQIVSIHTG+M EM WF MEFPKAE+LILNFSS ++Y LPPFI  M +L+ L++IN   S A L +FS+ ++L+ LRSLWLE+V + QL  S+ PLK + K+S +LCKIN S DQ+ +D+    P L +LT DHCDDL+ LP SICGL SL  LS+TNC  L
Sbjct:  433 KDCFLDLGAFPEDRKIPLDVLINIWIELHDIDEGNAFAILVDLSHKNLLTLGKDPRLGSLYASHYDIFVTQHDVLRDLALHLSNAGKVNRRKRLLMPKRELDLPGDWERNNDEHYIAQIVSIHTGEMNEMQWFDMEFPKAEILILNFSS-DKYVLPPFISKMSRLKVLVIINNGMSPAVLHDFSIFAHLSKLRSLWLERVHVPQLSNSTTPLKNLHKMSLILCKINKSFDQTGLDVADIFPKLGDLTIDHCDDLVALPSSICGLTSLSCLSITNCPRL 709          
BLAST of CV884968 vs. ExPASy Swiss-Prot
Match: DRL30_ARATH (Probable disease resistance protein At5g04720 OS=Arabidopsis thaliana GN=At5g04720 PE=2 SV=1)

HSP 1 Score: 351.673 bits (901), Expect = 3.026e-96
Identity = 162/277 (58.48%), Postives = 224/277 (80.87%), Query Frame = 2
Query:    2 KVKECFLDLGSFPEDKKIPLEVLINMWVEIHDLDEEEAFAILVELSDRNLLKIVKDARAGDMYSSYYEISVTQHDVLRDLALHLSNQENINDRKRLLMPRRDTELPKEWERNVDQPFNAQIVSIHTGDMREMDWFRMEFPKAEVLILNFSSTEEYFLPPFIENMEKLRALIVINYSTSNAALGNFSVCSNLTNLRSLWLEKVSISQLPKSSIPLKKMQKISFVLCKINNSLDQSVVDLPKTLPCLTELTFDHCDDLMKLPPSICGLQSLKNLSVTNC 832
            K ++CFL LG+FPEDKKIPL+VLIN+ VE+HDL++  AFA++V+L++RNLL +VKD R G MY+SYY+I VTQHDVLRD+AL LSN   +N+R+RLLMP+R++ LP+EWERN D+P+ A++VSIHTG+M +MDWF ME PKAEVLIL+FSS ++Y LPPFI  M KL AL++IN   S A L +FS+ +NL  L+SLWL++V + +L  S++PL+ + K+S + CKIN SLDQ+ +D+ +  P L++LT DHCDDL++LP +ICG+ SL ++S+TNC
Sbjct:  410 KTRDCFLVLGAFPEDKKIPLDVLINVLVELHDLEDATAFAVIVDLANRNLLTLVKDPRFGHMYTSYYDIFVTQHDVLRDVALRLSNHGKVNNRERLLMPKRESMLPREWERNNDEPYKARVVSIHTGEMTQMDWFDMELPKAEVLILHFSS-DKYVLPPFIAKMGKLTALVIINNGMSPARLHDFSIFTNLAKLKSLWLQRVHVPELSSSTVPLQNLHKLSLIFCKINTSLDQTELDIAQIFPKLSDLTIDHCDDLLELPSTICGITSLNSISITNC 685          
BLAST of CV884968 vs. ExPASy Swiss-Prot
Match: DRL39_ARATH (Putative disease resistance protein At5g47280 OS=Arabidopsis thaliana GN=At5g47280 PE=2 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 2.832e-94
Identity = 162/280 (57.86%), Postives = 220/280 (78.57%), Query Frame = 2
Query:    2 KVKECFLDLGSFPEDKKIPLEVLINMWVEIHDLDEEEAFAILVELSDRNLLKIVKDARAGDMYSSYYEISVTQHDVLRDLALHLSNQENINDRKRLLMPRRDTELPKEWERNVDQPFNAQIVSIHTGDMREMDWFRMEFPKAEVLILNFSSTEEYFLPPFIENMEKLRALIVINYSTSNAALGNFSVCSNLTNLRSLWLEKVSISQLPKSSIPLKKMQKISFVLCKINNSLDQSVVDLPKTLPCLTELTFDHCDDLMKLPPSICGLQSLKNLSVTNCHSL 841
            K KECFLD+G+FPE KKIP++VLINM V+IHDL++  AF +LV+L++RNLL +VKD     M +SYY+I VTQHDVLRD+ALHL+N+  ++ R RLLMP+R+T LP EWER+ D+P+NA++VSIHTG+M EMDWF M+FPKAEVLI+NFSS + Y LPPFI  M  LR  ++IN  TS A L +F + ++LTNLRSLWLE+V + +L  S IPLK + K+  ++CKINNS DQ+ +D+ +  P LT++T D+CDDL +LP +ICG+ SL ++S+TNC ++
Sbjct:  222 KTKECFLDMGAFPEGKKIPVDVLINMLVKIHDLEDAAAFDVLVDLANRNLLTLVKDPTFVAMGTSYYDIFVTQHDVLRDVALHLTNRGKVSRRDRLLMPKRETMLPSEWERSNDEPYNARVVSIHTGEMTEMDWFDMDFPKAEVLIVNFSS-DNYVLPPFIAKMGMLRVFVIINNGTSPAHLHDFPIPTSLTNLRSLWLERVHVPELSSSMIPLKNLHKLYLIICKINNSFDQTAIDIAQIFPKLTDITIDYCDDLAELPSTICGITSLNSISITNCPNI 500          
BLAST of CV884968 vs. ExPASy Swiss-Prot
Match: ADR1_ARATH (Disease resistance protein ADR1 OS=Arabidopsis thaliana GN=ADR1 PE=2 SV=2)

HSP 1 Score: 332.413 bits (851), Expect = 1.900e-90
Identity = 155/277 (55.96%), Postives = 214/277 (77.26%), Query Frame = 2
Query:    2 KVKECFLDLGSFPEDKKIPLEVLINMWVEIHDLDEEEAFAILVELSDRNLLKIVKDARAGDMYSSYYEISVTQHDVLRDLALHLSNQENINDRKRLLMPRRDTELPKEWERNVDQPFNAQIVSIHTGDMREMDWFRMEFPKAEVLILNFSSTEEYFLPPFIENMEKLRALIVINYSTSNAALGNFSVCSNLTNLRSLWLEKVSISQLPKSSIPLKKMQKISFVLCKINNSLDQSVVDLPKTLPCLTELTFDHCDDLMKLPPSICGLQSLKNLSVTNC 832
            K+++CFLD+G+FPEDKKIPL++L ++WVE HD+DEE AF+ ++ L+D+NLL IV + R GD++  YY++ VTQHDVLRDLALH+SN+ ++N R+RLLMP+ +  LP+EWE+N D+PF+A+IVS+HTG+M EM+WF M+ PKAEVLILNFSS + Y LPPFI  M +LR L++IN   S A L  FS+ +NL  LRSLWL++V + +L   +IPLK + KI  + CK+ NS  Q+  D+ K  P L++LT DHCDDL++L  SI G+ SL +LS+TNC
Sbjct:  387 KIRDCFLDMGAFPEDKKIPLDLLTSVWVERHDIDEETAFSFVLRLADKNLLTIVNNPRFGDVHIGYYDVFVTQHDVLRDLALHMSNRVDVNRRERLLMPKTEPVLPREWEKNKDEPFDAKIVSLHTGEMDEMNWFDMDLPKAEVLILNFSS-DNYVLPPFIGKMSRLRVLVIINNGMSPARLHGFSIFANLAKLRSLWLKRVHVPELTSCTIPLKNLHKIHLIFCKVKNSFVQTSFDISKIFPSLSDLTIDHCDDLLEL-KSIFGITSLNSLSITNC 661          
BLAST of CV884968 vs. ExPASy Swiss-Prot
Match: DRL43_ARATH (Probable disease resistance protein At5g66910 OS=Arabidopsis thaliana GN=At5g66910 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.787e-47
Identity = 108/283 (38.16%), Postives = 165/283 (58.30%), Query Frame = 2
Query:    5 VKECFLDLGSFPEDKKIPLEVLINMWVEIHDLDEEEAFAILV---ELSDRNLLKIVKDARAGDMYSSYYEISVTQHDVLRDLALHLSNQENINDRKRLLMPRRDTELPKEWERNVDQPFNAQIVSIHTGDMREMDWFRMEFPKAEVLILNFSSTEEYFLPPFIENMEKLRALIVINYSTSNAALGNFSVCSNLTNLRSLWLEKVSISQLPKSSIPLKKMQKISFVLCKINNSL-DQSVVDLPKTLPCLTELTFDHCDDLMKLPPSICGLQSLKNLSVTNCHSL 841
            +KECF+D+GSF +D+KI   ++I++W+E++          ++   EL+ +NLLK+V           Y E+ VTQH++LR+LA+  S  E I  RK+L +  R+   P E    ++QP NA+++SI+T D+    W  M+ P  E L+LN SS + Y LP FI  M+KL+ L + N+    A L NFS  S+L NL+ +  EKVS++ L    + L  ++K+SF +C       D   +D+ K L  L E+  D+C DL +LP  I  + SLK LS+TNC+ L
Sbjct:  414 LKECFMDMGSFLQDQKIRASLIIDIWMELYGRGSSSTNKFMLYLNELASQNLLKLVHLGTNKREDGFYNELLVTQHNILRELAIFQSELEPIMQRKKLNLEIREDNFPDEC---LNQPINARLLSIYTDDLFSSKWLEMDCPNVEALVLNISSLD-YALPSFIAEMKKLKVLTIANHGFYPARLSNFSCLSSLPNLKRIRFEKVSVTLLDIPQLQLGSLKKLSFFMCSFGEVFYDTEDIDVSKALSNLQEIDIDYCYDLDELPYWIPEVVSLKTLSITNCNKL 692          
BLAST of CV884968 vs. ExPASy Swiss-Prot
Match: DRL42_ARATH (Probable disease resistance protein At5g66900 OS=Arabidopsis thaliana GN=At5g66900 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.398e-46
Identity = 110/280 (39.29%), Postives = 159/280 (56.79%), Query Frame = 2
Query:    5 VKECFLDLGSFPEDKKIPLEVLINMWVEIHDLDEEEAFAILVELSDRNLLKIVKDARAGDMYSSYYEISVTQHDVLRDLALHLSNQENINDRKRLLMPRRDTELPKEWERNVDQPFNAQIVSIHTGDMREMDWFRMEFPKAEVLILNFSSTEEYFLPPFIENMEKLRALIVINYSTSNAALGNFSVCSNLTNLRSLWLEKVSISQLPKSSIPLKKMQKISFVLCKINNSL-DQSVVDLPKTLPCLTELTFDHCDDLMKLPPSICGLQSLKNLSVTNCHSL 841
            +KECFLD+GSF ED+KI   V+I+MWVE++       +  L +L+ +NLLK+V           Y +  VTQHD+LR+LA+  S  +   +RKRL +   +   P +W  N     NA ++SI T D+    W  M+ P  E L+LN SS++ Y LP FI  M+KL+ L + N+    A L NFS  S+L NL+ + LEKVSI+ L    + L  ++K+S V+C       D   + +   L  L E+  D+C DL +LP  I  + SLK LS+TNC+ L
Sbjct:  412 LKECFLDMGSFLEDQKIRASVIIDMWVELYGKGSSILYMYLEDLASQNLLKLVPLGTNEHEDGFYNDFLVTQHDILRELAICQSEFKENLERKRLNLEILENTFP-DWCLNT---INASLLSISTDDLFSSKWLEMDCPNVEALVLNLSSSD-YALPSFISGMKKLKVLTITNHGFYPARLSNFSCLSSLPNLKRIRLEKVSITLLDIPQLQLSSLKKLSLVMCSFGEVFYDTEDIVVSNALSKLQEIDIDYCYDLDELPYWISEIVSLKTLSITNCNKL 686          
BLAST of CV884968 vs. ExPASy Swiss-Prot
Match: DRL41_ARATH (Probable disease resistance protein At5g66890 OS=Arabidopsis thaliana GN=At5g66890 PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.475e-42
Identity = 109/283 (38.52%), Postives = 164/283 (57.95%), Query Frame = 2
Query:    5 VKECFLDLGSFPEDKKIPLEVLINMWVEIHDLDEEEAFAILVELSDRNLLKIVKDARAGDMYSSYYEISVTQHDVLRDLALH--LSNQENINDRKRLLMPRRDTELPKEWERNVDQPF--NAQIVSIHTGDMREMDWFRMEFPKAEVLILNFSSTEEYFLPPFIENMEKLRALIVINYSTSNAALGNFSVCSNLTNLRSLWLEKVSISQLPKSSIPLKKMQKISFVLCKINNSLDQSVVDLPKTLPCLTELTFDHCDDLMKLPPSICGLQSLKNLSVTNCHSL 841
            ++ECFLD+ SF ED++I    +I++W   +    +E    L +L+ RNLLK++   R       Y E+ V Q +VLR+ A++  L    +I +RKRL +  +D + P  W  N  QP   NA + SI T D     WF M+ P  E L+LN SS+  Y LP FI  M++L+ +I+IN+    A L N S  S+L NL+ +  EKVSIS L    + LK ++K+S   C + ++L++ + D+ +TL  L E+  D+C +L +LP  I  + SLK LSVTNC+ L
Sbjct:   16 LRECFLDMASFLEDQRIIASTIIDLWSASYG---KEGMNNLQDLASRNLLKLLPIGRNEYEDGFYNELLVKQDNVLREFAINQCLKESSSIFERKRLNLEIQDNKFPN-WCLNPKQPIVINASLFSISTDDSFASSWFEMDCPNVEALVLNISSSN-YALPNFIATMKELKVVIIINHGLEPAKLTNLSCLSSLPNLKRIRFEKVSISLLDIPKLGLKSLEKLSLWFCHVVDALNE-LEDVSETLQSLQEIEIDYCYNLDELPYWISQVVSLKKLSVTNCNKL 292          
The following BLAST results are available for this feature:
BLAST of CV884968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
DRL29_ARATH7.202e-9861.51Probable disease resistance protein At4g33300 OS=A... [more]
DRL30_ARATH3.026e-9658.48Probable disease resistance protein At5g04720 OS=A... [more]
DRL39_ARATH2.832e-9457.86Putative disease resistance protein At5g47280 OS=A... [more]
ADR1_ARATH1.900e-9055.96Disease resistance protein ADR1 OS=Arabidopsis tha... [more]
DRL43_ARATH5.787e-4738.16Probable disease resistance protein At5g66910 OS=A... [more]
DRL42_ARATH6.398e-4639.29Probable disease resistance protein At5g66900 OS=A... [more]
DRL41_ARATH1.475e-4238.52Probable disease resistance protein At5g66890 OS=A... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_011F09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884968 ID=CV884968; Name=CV884968; organism=Citrus sinensis; type=EST; length=843bp
AAAGGTCAAGGAATGTTTCTTGGATTTGGGATCATTTCCAGAAGACAAGA
AGATTCCTCTGGAGGTACTAATCAATATGTGGGTTGAGATCCATGACCTT
GATGAGGAAGAGGCTTTTGCCATCCTTGTTGAGCTTTCAGATAGAAACCT
TTTGAAGATTGTGAAAGATGCACGAGCTGGAGACATGTATAGCAGTTATT
ATGAGATATCTGTCACTCAACATGATGTGTTGAGAGACCTTGCTCTCCAC
CTGAGCAACCAAGAGAACATCAATGATCGCAAGCGATTGCTTATGCCAAG
AAGAGACACTGAACTACCTAAAGAATGGGAGCGGAATGTGGATCAGCCAT
TCAACGCTCAAATTGTTTCCATTCATACAGGTGATATGAGGGAAATGGAC
TGGTTCCGCATGGAATTTCCAAAGGCTGAAGTGCTAATCCTGAATTTCTC
TTCTACGGAGGAGTACTTCTTGCCTCCCTTCATCGAGAACATGGAAAAAC
TCAGGGCACTCATTGTGATAAACTATAGTACTTCAAATGCAGCCCTTGGC
AACTTTTCAGTCTGTTCAAATTTAACCAACTTGAGAAGCCTCTGGCTTGA
AAAGGTCTCCATTTCTCAATTACCAAAATCTTCAATCCCCTTGAAAAAAA
TGCAGAAGATCTCTTTTGTTCTCTGCAAGATTAACAACAGCCTAGATCAA
TCAGTAGTTGACCTGCCCAAGACGTTGCCTTGCCTCACGGAGCTCACATT
TGATCATTGTGATGATCTAATGAAGCTACCTCCAAGCATTTGTGGACTGC
AGTCACTTAAGAATTTAAGTGTCACTAACTGCCACAGTCTACA
back to top