CV884923

Overview
NameCV884923
Unique NameCV884923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1841 contig Csv1_Contig1841:45..957. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 419.853 bits (1078), Expect = 1.032e-116
Identity = 188/235 (80.00%), Postives = 203/235 (86.38%), Query Frame = 3
Query:   45 LLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFCH 749
            LL LS     +FILTLVNNCP+ +WPAIQPNAGHPVLERGGF LHSLTHRSFPAP  HWSGRIWARTGC Y HGKF C TGDCG R+EC+GLGGA PATLAQF LHHGH D S+YGVSLVDGFN+P+TVTPHEGKGVCPVVGCRA+LL +CP  LQ RS  GHG VV CKS CEAF +DE CCRNHYNSPQTC+ SS+S+FFKHACPAT TYAHDSPSLMH+CSSPRELKVIFCH
Sbjct:   18 LLSLSQSTNPNFILTLVNNCPYTIWPAIQPNAGHPVLERGGFTLHSLTHRSFPAPNAHWSGRIWARTGCNYQHGKFYCATGDCGGRIECDGLGGAAPATLAQFVLHHGHADFSTYGVSLVDGFNIPLTVTPHEGKGVCPVVGCRANLLESCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQTCKPSSYSQFFKHACPATFTYAHDSPSLMHECSSPRELKVIFCH 252          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 6.161e-53
Identity = 114/248 (45.97%), Postives = 150/248 (60.48%), Query Frame = 3
Query:    6 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAH-GKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            MAS + +F+ A +LLL  S+A AS ++   N C  PVWP IQP+AG  +L  GGF L +    S   P   WSGR W R GCT+   G+  C TGDCG  L CNG GG  PATLA+ +L     +L  Y VSLVDG+N+ M++ P +G G C   GC +DL   CP  LQVRS  G  RVVACKS C AF + + CC   + +PQ+C+ +++S+ FK ACP   +YA+D P+ +  CS    + V FC
Sbjct:    1 MASIN-LFLFAFLLLL--SHASASTVI-FYNKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPL-WSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLGP---ELDFYDVSLVDGYNLAMSIMPVKGSGQCSYAGCVSDLNQMCPVGLQVRSRNGK-RVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATCSKANYI-VTFC 238          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.018e-47
Identity = 98/252 (38.89%), Postives = 138/252 (54.76%), Query Frame = 3
Query:    6 MASTSPIFISATILLLLSSYA----KASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            MA+   + ++A +++ +++           L +VNNC   VWP +   AGHP  + GGF+L +    +   PA  WSGR+W R GC++ + G+ SC TGDCG  L CNG  GATPAT+ + +L    + +  Y VSLVDGFN P+++    G   C    C AD+   CP  L+VR     GRV  C+S C A G D  CC   Y SP  CR + FS  FK  CP   +YA+D  + ++ C + R L + FC
Sbjct:    1 MATPLLLVVNAILIMAITACGGGGGNGGIQLIMVNNCGESVWPGLLGTAGHPTPQSGGFHLGAGEEAALEVPAG-WSGRVWPRRGCSFDSRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGGGVGCGTAACGADVNVCCPSALEVRD--REGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRCHAKRYL-ITFC 248          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.528e-46
Identity = 102/249 (40.96%), Postives = 133/249 (53.41%), Query Frame = 3
Query:    6 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGC-TYAHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            M  T  + +S ++ +L    A A+ I +  NNCP+ VWP    +   P L   GF L S        P   W+GR WARTGC T A GKF C T DC   ++ CNG G   PATLA+F++  G      Y VSLVDGFN+PM+VTP  G G C    C A++ A CP  LQ +     G VVAC S C  FGT + CC    N+P+TC  +++SE F +ACP   +YA+D       C+      + FC
Sbjct:    1 MMKTLVVVLSLSLTILSFGGAHAATI-SFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVP-WNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQ-DFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKG--SDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFC 244          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.528e-46
Identity = 109/248 (43.95%), Postives = 134/248 (54.03%), Query Frame = 3
Query:    6 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            MA+ S I I   ++ + S  A  +   TL NNCP  VW       G P L  GGF L     R   APA  WSGR WARTGC + A G   CVTGDCG  L CNG GG  P TLA+F+L  G      Y VSLVDG+NV + + P  G G C   GC +DL A CP  L+V        VVACKS CE F TD+ CCR   + P+TC  + +S  FK+ACP   +YA+D  +    C+     ++ FC
Sbjct:    1 MANISSIHI-LFLVFITSGIAVMATDFTLRNNCPTTVWAGTLAGQG-PKLGDGGFELTPGASRQLTAPAG-WSGRFWARTGCNFDASGNGRCVTGDCGG-LRCNG-GGVPPVTLAEFTLV-GDGGKDFYDVSLVDGYNVKLGIRPSGGSGDCKYAGCVSDLNAACPDMLKVMD---QNNVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTCTG-ANYEITFC 238          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.123e-45
Identity = 104/250 (41.60%), Postives = 135/250 (54.00%), Query Frame = 3
Query:    6 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGC-TYAHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSLH-HGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            M S     +  T+ +L  S A A+ I T  NNCP  VWP        P L   GF L S   RS  AP+  WSGR W RT C T A GKF+C T DCG  ++ CNG G   PATL + ++  +G  D   Y VSLVDGFN+PM+V P  G G C    C A++   CP  LQV++    G V++CKS C AFG  + CC    N+P+TC  + +SE F+  CP   +YA+D  +    CS   +  + FC
Sbjct:    2 MKSQVASLLGLTLAILFFSGAHAAKI-TFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSP-WSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDY--YDVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNKVCPAPLQVKA--ADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 245          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.288e-42
Identity = 102/250 (40.80%), Postives = 131/250 (52.40%), Query Frame = 3
Query:    6 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGC-TYAHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSL-HHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            M S + +    T+ +L  S A A+ I T  N C + VWP        P L   GF L +   RS  AP+  WSGR + RT C T A GKF+C T DCG  ++ CNG G A PATL + ++  +G  D   Y VSLVDGFN+PM+V P  G G C    C AD+   CP  LQV+     G V+ACKS C AF   + CC    + P+TC    +S+ FK  CP   +YA+D  S    CS      + FC
Sbjct:    2 MKSQAALLGLTTLAILFFSGAHAAKI-TFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGISRSVDAPSP-WSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDF--YDVSLVDGFNLPMSVAPQGGTGKCKASTCPADINKVCPAPLQVKG--SDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFC 245          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.172e-41
Identity = 90/248 (36.29%), Postives = 125/248 (50.40%), Query Frame = 3
Query:    6 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            M  T  ++     L  LS    A   +T  NNCP  +WP    +   P L   GF L S    +    A  W GR WART CT   GKF+C T DC   ++ CNG G   PA+L + ++   +  +  Y VSLVDG+N+P++V    G G C    CRA++ A CP  LQV+       V+ACKS C AF   + CC   +++ +TC A+ +S  FK  CP   +YA+D  +    CS   +  + FC
Sbjct:    1 MMKTLALYGLTLALFFLSGAHSAK--ITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGVQAP-WKGRFWARTRCTTNSGKFTCETADCSTGQVACNGNGAIPPASLVEINIA-ANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQVKG--SDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFC 242          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.574e-40
Identity = 99/249 (39.76%), Postives = 127/249 (51.00%), Query Frame = 3
Query:    6 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGC-TYAHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            M  T    +S ++ LL    A A+  ++  NNCP+ VWPA   + G+P L   GF L S        P   WSGR WART C T A GKF C T DC   +L CNG  G  PATLA+F++  G      Y VSLVDGFN+PM+VTP  G G C +  C A++   CP  LQ       G VVAC S C  FG  + CC     + + C  +++S+ F   CP   +YA D    +  CS      + FC
Sbjct:    1 MMKTLGAVLSLSLTLLSFGGAHAA-TMSFKNNCPYTVWPA---SFGNPQLSTTGFELASQASFQLDTPVP-WSGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQ-DFYDVSLVDGFNLPMSVTPQGGTGTCKMGSCAANVNLVCPSELQ--KIGSDGSVVACLSACVKFGEPQYCCTPPQETKEKCPPTNYSQIFHEQCPDAYSYAFDDNKGLFTCSGGPNYLITFC 241          
BLAST of CV884923 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.685e-40
Identity = 92/239 (38.49%), Postives = 121/239 (50.63%), Query Frame = 3
Query:   42 ILLLLSSYAKA-SFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSLH-HGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHDCSSPRELKVIFC 746
            +L+ LS +A   S   T  N CP  VWP      G P L   GF L S    S    A  WSGR W R+ C+  + GKF C TGDCG  ++ CNG G + PA+L + +L  +G  D   Y VSLVDGFN+P+ + P  G G C    C A++   CP  L  +     G V+ CKS C A    + CC   Y +P TC  + FS+ FK+ CP   +YA+D  S    C      ++ FC
Sbjct:   10 VLVFLSEHAGVYSAKFTFTNKCPNTVWPGTLTGGGGPQLLSTGFELASGASTSLTVQAP-WSGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDF--YDVSLVDGFNLPIKLAPRGGSGDCNSTSCAANINTVCPAELSDKG--SDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPNYEITFC 243          
The following BLAST results are available for this feature:
BLAST of CV884923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
OLP1_SOLLC1.032e-11680.00Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]
TLPH_ARATH6.161e-5345.97Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
TLPH_ORYSJ1.018e-4738.89Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TLP_PRUAV9.528e-4640.96Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
PR5_ARATH9.528e-4643.95Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TP1A_MALDO2.123e-4541.60Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLP1_PRUPE1.288e-4240.80Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TLP1_CASSA3.172e-4136.29Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLP2_PRUPE1.574e-4039.76Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
TLP1_PYRPY2.685e-4038.49Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011D08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884923 ID=CV884923; Name=CV884923; organism=Citrus sinensis; type=EST; length=913bp
ACGAAATGGCCTCAACTTCGCCCATTTTCATTTCAGCAACTATCCTTCTT
CTCCTCAGCTCCTACGCCAAAGCAAGCTTCATACTGACCCTAGTCAACAA
CTGCCCCTTCCCCGTCTGGCCGGCCATCCAGCCCAACGCCGGCCACCCAG
TCCTCGAACGTGGCGGCTTCTATCTCCATAGCCTCACCCACCGCTCCTTC
CCCGCTCCGGCCCAGCACTGGTCGGGCCGGATCTGGGCCAGAACCGGCTG
CACCTACGCCCACGGCAAATTCTCCTGCGTCACGGGCGACTGCGGCCACC
GCTTGGAATGCAACGGACTCGGCGGGGCGACTCCAGCCACCCTGGCCCAG
TTCAGCCTCCACCACGGCCACAACGACCTCTCCTCCTACGGCGTCTCTCT
AGTCGACGGCTTCAACGTCCCCATGACTGTCACCCCGCACGAGGGCAAGG
GCGTCTGTCCGGTAGTGGGTTGTCGCGCTGACCTGCTAGCCACGTGTCCT
CAGAACCTGCAGGTGAGGTCACCGCCGGGTCACGGCCGCGTGGTGGCATG
TAAGAGTGGGTGTGAGGCGTTTGGTACGGACGAGCTGTGTTGTAGGAACC
ATTACAACAGTCCGCAGACATGCCGGGCTTCGAGCTTTTCGGAGTTCTTC
AAGCACGCTTGTCCAGCCACGATGACTTATGCCCATGACAGCCCTTCGCT
CATGCATGACTGCTCCTCGCCACGTGAGCTAAAAGTTATTTTCTGTCACT
AGAGAAGCATGAGAATAATAATAAGCTGGAGCATCAAGCTTCACAGTGCT
TAGGATTGTTGTGTTTGTTTTCGTCAATTAGCAGTATCTTGCTTTTTAAT
TAATCTCGTAACTAAAAAGAGAAATTAAAAATGATCAATGTGAGCTTGTG
TCATGTTGGGTGT
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