CV884882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884882 vs. ExPASy Swiss-Prot
Match: PSF1_DICDI (Probable DNA replication complex GINS protein PSF1 OS=Dictyostelium discoideum GN=gins1 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.935e-22 Identity = 66/200 (33.00%), Postives = 106/200 (53.00%), Query Frame = 3 Query: 39 MHGRLGSRLVKELASGEKGQLTHFNDELLNEVIKECSENFLAL-QSLIRKMQEEGLDFQTTRNADHYGALINHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFELPEEIQEKLSHLEKDYFKRHSAALESYMSKVDLNLNVDMVPPKDPYIKVRVLDDLGEGIVVSDKAANFARHSMHFLKRTDAEPYISRGLMEEL 635 M + L+KEL + + H+ND + I E +AL + LI+ + E + H A+ H S+ R+KRC++AY+ R I+ W+ G L LP++++E+LS E +F + L Y SKV L+L +D PPK+ YI+VRV+ +LGE ++ S N ++ HFLKR+D + G +E + Sbjct: 1 MFTKTAIELIKELRGTDS--IPHYNDTSIKATIDE----MIALYEDLIKTITEHKEQKKEPFYLQH--AITFHNSINRDKRCILAYLNERLNRIKEYRWSSGQSL--LPDQLKERLSQNEIQFFSEYDKILTEYNSKVGLDLTIDPQPPKELYIEVRVIKELGEVVLNSGCTVNLNLNTTHFLKRSDITNLVKNGSLEHI 190
BLAST of CV884882 vs. ExPASy Swiss-Prot
Match: PSF1_BOVIN (DNA replication complex GINS protein PSF1 OS=Bos taurus GN=GINS1 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.354e-20 Identity = 63/196 (32.14%), Postives = 105/196 (53.57%), Query Frame = 3 Query: 63 LVKELASGEKGQLTHFNDELLNEVIKECSENFLALQSLIRKMQEEGLDFQTTRNADHYGAL-INHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFELPEEIQEKLSHLEKDYFKRHSAALESYMSKVD----LNLNVDMVPPKDPYIKVRVLDDLGEGIVVSDKAANFARHSMHFLKRTDAEPYISRGLMEEL 635 LV+EL +G+L FN++ L +V++E +++L + Q + + +++ D + H SL+RN+RC +AY+Y+R I+ L W G LP ++ +S E D+F R+ +L +YM + L++ DM PPK YI+VR L D GE V + ++S HFL R E I +G++E + Sbjct: 9 LVRELHRAAEGRLPAFNEDGLRQVLEE-------MKALYEQNQSDVNEAKSSGRGDLIPTIKFRHCSLLRNQRCTVAYLYDRLLRIRALRWEYGS---VLPSALRFHMSAEEMDWFNRYKKSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLKDYGEFEVEDGTSVLLKKNSQHFLPRWKCEQLIRQGILEHV 194
BLAST of CV884882 vs. ExPASy Swiss-Prot
Match: PSF1_HUMAN (DNA replication complex GINS protein PSF1 OS=Homo sapiens GN=GINS1 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.211e-19 Identity = 60/196 (30.61%), Postives = 104/196 (53.06%), Query Frame = 3 Query: 63 LVKELASGEKGQLTHFNDELLNEVIKECSENFLALQSLIRKMQEEGLDFQTTRNADHYGAL-INHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFELPEEIQEKLSHLEKDYFKRHSAALESYMSKVD----LNLNVDMVPPKDPYIKVRVLDDLGEGIVVSDKAANFARHSMHFLKRTDAEPYISRGLMEEL 635 L++EL +GQL FN++ L +V++E +++L + Q + + ++ +D + H SL+RN+RC +AY+Y+R I+ L W G LP ++ ++ E ++F + +L +YM + L++ DM PPK YI+VR L D GE V + ++S HFL R E I +G++E + Sbjct: 9 LIRELHRAPEGQLPAFNEDGLRQVLEE-------MKALYEQNQSDVNEAKSGGRSDLIPTIKFRHCSLLRNRRCTVAYLYDRLLRIRALRWEYGS---VLPNALRFHMAAEEMEWFNNYKRSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLKDYGEFEVDDGTSVLLKKNSQHFLPRWKCEQLIRQGVLEHI 194
BLAST of CV884882 vs. ExPASy Swiss-Prot
Match: PSF1_MOUSE (DNA replication complex GINS protein PSF1 OS=Mus musculus GN=Gins1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.829e-18 Identity = 62/196 (31.63%), Postives = 100/196 (51.02%), Query Frame = 3 Query: 63 LVKELASGEKGQLTHFNDELLNEVIKECSENFLALQSLIRKMQEEGL-DFQTTRNADHYGALINHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFELPEEIQEKLSHLEKDYFKRHSAALESYMSKVD----LNLNVDMVPPKDPYIKVRVLDDLGEGIVVSDKAANFARHSMHFLKRTDAEPYISRGLMEEL 635 LV+EL +GQL FN++ L +V++E + QS + + + G D T H +L+RN+RC +AY+Y+R I+ L W G LP ++ +S E ++F + +L +YM + L++ D+ PPK YI+VR L D GE V + ++S HFL R E I +G++E + Sbjct: 9 LVRELHRAPEGQLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSAGRGDLIPT-------VKFRHCALLRNRRCTIAYLYDRLLRIRALRWEYGS---VLPNSLRFHMSAEETEWFNHYKKSLATYMRSLGGDEGLDITQDVKPPKSLYIEVRCLKDYGEFEVDDGTSVLLKKNSQHFLPRWKCEQLIRQGVLEHV 194
BLAST of CV884882 vs. ExPASy Swiss-Prot
Match: PSF1_CHAGB (DNA replication complex GINS protein PSF1 OS=Chaetomium globosum GN=PSF1 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.078e-18 Identity = 67/216 (31.02%), Postives = 110/216 (50.93%), Query Frame = 3 Query: 39 MHGRLGSRLVKELASGEKGQLTH---FNDELLNEVIKECSENFLALQSLIRKMQEEGLDFQTTRNADHYGALINHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFELPEE-------------IQEKLSHLEKDYFKRHSAALESYMSK-VDLNLNVDMVPPKDPYIKVRVLDDLGEGIVVSDKAANFARHSMHFLKRTDAEPYISRGLMEEL 635 M+G LG++LV+ + LTH + EL+ V +E + + SL+ Q G +T A L+NHLS+ RNKRCL+AY R + ++ L W G + +L + LS E+DYF+++ L +Y + D++L + PP+D +I VRVL D GE I A N ++S ++++ D E I++G +++L Sbjct: 3 MYGDLGNKLVQHAKRTQN--LTHLPPYQTELVRAVTREVRDLDKDVASLLEPFQ--GSFDPSTDQATACTLLVNHLSMRRNKRCLLAYHRTRTDKLEELVWN-GSDVLDLAGQQAGGVNGAAADSGAGSSLSPQEEDYFRQYGDLLSAYKGQWTDIDLTGSLEPPRDLFIDVRVLKDAGE-IQTEYGAINLTKNSQFYVRQGDVERLIAQGYLQKL 212
BLAST of CV884882 vs. ExPASy Swiss-Prot
Match: PSF1_NEUCR (DNA replication complex GINS protein psf-1 OS=Neurospora crassa GN=psf-1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.236e-16 Identity = 66/217 (30.41%), Postives = 107/217 (49.31%), Query Frame = 3 Query: 39 MHGRLGSRLVKELASGEK-GQLTHFNDELLNEVIKECSENFLALQSLIRKMQEEGLDFQTTRNADHYGALINHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFEL-------PEEIQE---------KLSHLEKDYFKRHSAALESYMSK-VDLNLNVDMVPPKDPYIKVRVLDDLGEGIVVSDKAANFARHSMHFLKRTDAEPYISRGLMEEL 635 M+G LG++LV+ + L + EL+ V +E + + SL+ Q G + A L+NHLS+ RNKRCL+AY R + ++ L W G + +L P+ + E LS E+DYF++ L Y + D++L + PP+D +I VRVL D GE I A N ++S ++++ D E I +G +++L Sbjct: 3 MYGDLGNKLVQHAKRTQNLSHLPPYQTELVRAVAREIRDLDKDVASLLEPFQ--GSFDPSAEQATACTLLVNHLSMRRNKRCLLAYHRIRTDKLEELVWN-GADILDLAGQTTGGPKGVTEGNEGGGTTSSLSPQEEDYFRQFGDLLALYKGQWTDIDLTGSLEPPRDLFIDVRVLKDAGE-IQTEYGAINLTKNSQFYVRQGDVERLIVQGYLQKL 215
BLAST of CV884882 vs. ExPASy Swiss-Prot
Match: PSF1_YEAST (DNA replication complex GINS protein PSF1 OS=Saccharomyces cerevisiae GN=PSF1 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.814e-16 Identity = 61/213 (28.64%), Postives = 108/213 (50.70%), Query Frame = 3 Query: 39 MHGRLGSRLVKELA--------SGEKGQLTHFNDELLNEVIKECSENFLALQSLIRKMQEEGLDFQTTRNADHYGALINHLSLIRNKRCLMAYVYNRAEMIQNLAWTV-GLRLFE---LPEEIQEKLSHLEKDYFKRHSAALESYMSK--VDLNLNVDMVPPKDPYIKVRVLDDLGEGIVVSDKAANFARHSMHFLKRTDAEPYISRGLMEEL 635 M+G LG++LV E S + L ++++++ ++KE S N +++ Q+ G+ ++ L L + RNKRCL+AY R +++ ++AW GL L ++ LSH E++Y K + + S VD++L+ +VPP D +I VRVL D GE I N + S F++++D E I +G ++++ Sbjct: 1 MYGDLGNKLVLEAKRTKQLYARSNQDVNLPMYHEDIIRNILKEVS-NLRKNTEYLKEQQQLGMLDDKVAKCQYFVTL---LCMERNKRCLLAYQRLRTDILDSMAWNNNGLDLMSSITFSQQDTNNLSHQEQEYLKEYCDLITDLKSGDLVDIDLSGSLVPPSDVFIDVRVLKDAGE-IQTEYGVFNLIKDSQFFVRQSDVERLIQQGYLQKI 208
BLAST of CV884882 vs. ExPASy Swiss-Prot
Match: PSF1_EMENI (DNA replication complex GINS protein psf1 OS=Emericella nidulans GN=psf1 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.227e-14 Identity = 64/227 (28.19%), Postives = 105/227 (46.26%), Query Frame = 3 Query: 39 MHGRLGSRLVKELASGEK-GQLTHFNDELLNEVIKECSENFLALQSLIRKMQEEGLDFQTTRNADHYGALINHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFELPEEI-------------------------QEKLSHLEKDYFKRHSAALESYMSK-VDLNLNVDMVPPKDPYIKVRVLDDLGEGIVVSDKAANFARHSMHFLKRTDAEPYISRGLMEELT 638 M+G LG++LV+ + L + EL+ V +E + L L+ EG + A L++HL + RNKRCL+AY R E ++ L W G+ + E + + LS E++YF+ +S L +Y + D++L + PPKD +I VRVL D GE I N ++S +++ D E I++G +E+L+ Sbjct: 1 MYGELGNKLVQHAKRTQSLAHLPPYQTELVRTVAREVRDLDRDLAHLLAPF--EGSFNPSQEPAVACALLVDHLCIRRNKRCLLAYHRVRTEKLEELCWK-GIDVLEHQQATAAGDDGGQMGGQNSESTGAQGTSGNESSLSPEEEEYFREYSDMLATYKGQWTDIDLTGSLEPPKDLFIDVRVLKDAGE-IQTEYGVINLTKNSQLYVRHGDVERLIAQGFLEQLS 223
BLAST of CV884882 vs. ExPASy Swiss-Prot
Match: PSF1_SCHPO (DNA replication complex GINS protein psf1 OS=Schizosaccharomyces pombe GN=psf1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.733e-14 Identity = 63/206 (30.58%), Postives = 101/206 (49.03%), Query Frame = 3 Query: 39 MHGRLGSRLVKELASGEKGQ----LTHFNDELLNEVIKEC-SENFLALQSLIRKMQEEGLDFQTTRNADHYGALIN-HLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFELPEEIQEKLSHLEKDYFKRHSAALESYMSK-VDLNLNVDMVPPKDPYIKVRVLDDLGEGIVVSDKAANFARHSMHFLKRTDAEPYISRGLMEEL 635 M LG+R K + ++ Q L + + +N+V+ E + + +L L E FQ + AL+ H S I NKRCLMAY R + ++ W+ G R+ + LS E+DY R+S L +Y +L+L +VPPK+ +I VRVL D+G+ I N ++S ++ TD E I++G + +L Sbjct: 1 MENGLGNRSNKLIRDSKRTQYLDYLPPYQADTVNDVVNEIRAADRESLGILQNVTHEASQPFQPQDHPSEAAALLMFHSSSIYNKRCLMAYHNLRLQRLRQYCWSGGKRMESC---LDTSLSTYERDYLTRYSELLAAYKGAWSELDLTGSLVPPKNLFIDVRVLKDVGD-IETEYGTINLTKNSQLHVRATDVERLIAQGFLAKL 202
BLAST of CV884882 vs. ExPASy Swiss-Prot
Match: PSF1_KLULA (DNA replication complex GINS protein PSF1 OS=Kluyveromyces lactis GN=PSF1 PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 7.953e-14 Identity = 62/217 (28.57%), Postives = 105/217 (48.39%), Query Frame = 3 Query: 39 MHGRLGSRLVKEL--------ASGEKGQLTHFNDELLNEVIKECSENFLALQSLIRKMQEEGLDFQTTRNADHYGALINHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLF--------ELPEEIQEKLSHLEKDYFKRHSAALESYMS--KVDLNLNVDMVPPKDPYIKVRVLDDLGEGIVVSDKAANFARHSMHFLKRTDAEPYISRGLMEEL 635 M+G L ++L+ E A K QL + DEL+ ++KE +L+ + ++E+ L Q + A ++ LS+ RNKRCL+AY R+EM+ ++ W F L LSH E++Y K ++ L S +++L + PP D +I VRVL D G+ I N + S F++++D E I +G ++++ Sbjct: 1 MYGDLANKLILEAKRTQQLSQAGFNKQQLPVYQDELVRGILKEVG----SLKKNVDYLREQQLTDQDNKVAQCQ-YVVAMLSMERNKRCLLAYQKMRSEMLDSMVWDNNGMEFSSAISNHPNLSSFDSSVLSHAEQEYLKEYAQLLTELKSGELSEIDLTGMLQPPSDVFIDVRVLKDAGQ-IETEYGVFNLIKDSQFFVRQSDVERLIQQGYLQKI 211 The following BLAST results are available for this feature:
BLAST of CV884882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884882 ID=CV884882; Name=CV884882; organism=Citrus sinensis; type=EST; length=809bpback to top |