CV884869

Overview
NameCV884869
Unique NameCV884869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length955
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11 contig Csv1_Contig11:300..1254. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884869 vs. ExPASy Swiss-Prot
Match: OEP80_ARATH (Outer envelope protein of 80 kDa OS=Arabidopsis thaliana GN=OEP80 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.694e-69
Identity = 87/140 (62.14%), Postives = 105/140 (75.00%), Query Frame = -1
Query:  494 TGSGKTHDDVLIAKFESVYTGSGNHGSSMFVFDMEQGLPVLPKWLFFNRVNAHARKGVDISHARLRLNLSGGHVIGNFYPHEAFAIGGTNSVRGYEEXXXXXXXXXXXXXGEITFPMLGPAEGVIFSDHGTELGSGPTVP 913
            T SGK HD+ ++AK ES+YTGSG+ GS+MF F+MEQGLPVLP+WL FNRV   ARKG+ I  AR   +LSGGHV+G F PHEAF IGGTNSVRGYEE             GE++FP+ GP EGVIF+D+GT++GSG TVP
Sbjct:  542 TASGKPHDETMLAKLESIYTGSGDQGSTMFAFNMEQGLPVLPEWLCFNRVTGRARKGIHIGPARFLFSLSGGHVVGKFSPHEAFVIGGTNSVRGYEEGAVGSGRSYVVGSGELSFPVRGPVEGVIFTDYGTDMGSGSTVP 681          

HSP 2 Score: 89.3521 bits (220), Expect = 1.694e-69
Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = -2
Query:  352 PGDPAGARLKPGSGYGHGFGIRVDSPLGPLGLEYAFNDRQTRRFHFG 492
            PGDPAGARLKPGSGYG+G G+RVDSPLGPL LEYAFND+   RFHFG
Sbjct:  681 PGDPAGARLKPGSGYGYGLGVRVDSPLGPLRLEYAFNDQHAGRFHFG 727          

HSP 3 Score: 31.5722 bits (70), Expect = 1.694e-69
Identity = 13/13 (100.00%), Postives = 13/13 (100.00%), Query Frame = -3
Query:  915 GNPIIKDFYSSPL 953
            GNPIIKDFYSSPL
Sbjct:  529 GNPIIKDFYSSPL 541          
BLAST of CV884869 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSI (Outer envelope protein of 80 kDa OS=Oryza sativa subsp. indica GN=OEP80 PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.881e-64
Identity = 84/140 (60.00%), Postives = 101/140 (72.14%), Query Frame = -1
Query:  494 TGSGKTHDDVLIAKFESVYTGSGNHGSSMFVFDMEQGLPVLPKWLFFNRVNAHARKGVDISHARLRLNLSGGHVIGNFYPHEAFAIGGTNSVRGYEEXXXXXXXXXXXXXGEITFPMLGPAEGVIFSDHGTELGSGPTVP 913
            T SG  +DD L+AK ESVYT SG+  S+MFVF++EQGLP+LP+WL FNRV A  R+G +I  ARL L+ SGGHV GNF PHEAFAIGGTNSVRGYEE             GE++  M GP EGV+F D+G++L SGP VP
Sbjct:  475 TASGNAYDDTLLAKLESVYTDSGDRSSTMFVFNIEQGLPILPEWLSFNRVTARLRQGYEIGPARLLLSASGGHVEGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYAVGSGEVSCRMFGPLEGVVFGDYGSDLSSGPKVP 614          

HSP 2 Score: 91.2781 bits (225), Expect = 1.881e-64
Identity = 41/47 (87.23%), Postives = 43/47 (91.49%), Query Frame = -2
Query:  352 PGDPAGARLKPGSGYGHGFGIRVDSPLGPLGLEYAFNDRQTRRFHFG 492
            PGDPAGAR KPGSGYG+G GIRVDSPLGPL LEYAFND+Q RRFHFG
Sbjct:  614 PGDPAGARGKPGSGYGYGVGIRVDSPLGPLRLEYAFNDKQARRFHFG 660          

HSP 3 Score: 26.1794 bits (56), Expect = 1.881e-64
Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = -3
Query:  915 GNPIIKDFYSSPL 953
            GNPII+DFY+S L
Sbjct:  462 GNPIIRDFYNSQL 474          
BLAST of CV884869 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSJ (Outer envelope protein of 80 kDa OS=Oryza sativa subsp. japonica GN=OEP80 PE=3 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 2.449e-64
Identity = 84/140 (60.00%), Postives = 101/140 (72.14%), Query Frame = -1
Query:  494 TGSGKTHDDVLIAKFESVYTGSGNHGSSMFVFDMEQGLPVLPKWLFFNRVNAHARKGVDISHARLRLNLSGGHVIGNFYPHEAFAIGGTNSVRGYEEXXXXXXXXXXXXXGEITFPMLGPAEGVIFSDHGTELGSGPTVP 913
            T SG  +DD L+AK ESVYT SG+  S+MFVF++EQGLP+LP+WL FNRV A  R+G +I  ARL L+ SGGHV GNF PHEAFAIGGTNSVRGYEE             GE++  M GP EGV+F D+G++L SGP VP
Sbjct:  475 TASGNAYDDTLLAKLESVYTDSGDRSSTMFVFNIEQGLPILPEWLSFNRVTARLRQGYEIGPARLLLSASGGHVEGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYAVGSGEVSCRMFGPLEGVVFGDYGSDLSSGPKVP 614          

HSP 2 Score: 90.8929 bits (224), Expect = 2.449e-64
Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = -2
Query:  352 PGDPAGARLKPGSGYGHGFGIRVDSPLGPLGLEYAFNDRQTRRFHFG 492
            PGDPAGAR KPGSGYG+G G+RVDSPLGPL LEYAFND+Q RRFHFG
Sbjct:  614 PGDPAGARGKPGSGYGYGVGVRVDSPLGPLRLEYAFNDKQARRFHFG 660          

HSP 3 Score: 26.1794 bits (56), Expect = 2.449e-64
Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = -3
Query:  915 GNPIIKDFYSSPL 953
            GNPII+DFY+S L
Sbjct:  462 GNPIIRDFYNSQL 474          
The following BLAST results are available for this feature:
BLAST of CV884869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
OEP80_ARATH1.694e-6962.14Outer envelope protein of 80 kDa OS=Arabidopsis th... [more]
OEP80_ORYSI1.881e-6460.00Outer envelope protein of 80 kDa OS=Oryza sativa s... [more]
OEP80_ORYSJ2.449e-6460.00Outer envelope protein of 80 kDa OS=Oryza sativa s... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011B03_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884869 ID=CV884869; Name=CV884869; organism=Citrus sinensis; type=EST; length=955bp
TTTTTTTTTTTTTTTTTCATAAAATGCTTTTATATTTCTGGTCATTATGT
GGCAAGATACAATCAATATCATGACCCCTAACAGAAAATAATGAAAATAT
AGGCCATGTCAAAGTCACGCTTTTCCAGAAACGCATCAGTAAACTTAAAA
ATGTTTAATTGAGATTTCAATGTATCAGCACGACACTGATACTTGGATAA
CATAGGTGTGCATATGAGATTATGCCAATAAATGCCCGAAAGCAATGCAA
CTAATTTTTCGTCGATGAATAAATCAAGATGCCGCTAGGTGTTCATCACT
TCAGCAGTGGTTTTATGAAAATGAAGTTAAAAGATACTATTTCACCAGAA
ACCCAAAGTGAAATCTCCTTGTCTGCCTGTCATTAAATGCATACTCAAGT
CCCAAAGGTCCCAGAGGAGAATCAACACGGATGCCAAACCCATGTCCATA
CCCACTTCCAGGCTTCAACCTTGCTCCAGCAGGATCACCGGGCGGGCACA
GTAGGGCCTGATCCAAGTTCTGTTCCATGGTCAGAAAAGATAACTCCTTC
TGCTGGCCCCAACATCGGAAAAGTGATCTCGCCAGAGCCAACCACGTAAG
ATCGACCAGAGCCCACTGCACCTTCTTCATAACCTCTCACACTATTTGTT
CCGCCAATGGCAAATGCTTCATGAGGATAGAAATTACCTATTACATGTCC
ACCAGACAAATTTAAACGAAGGCGAGCATGACTTATATCTACACCCTTTC
TGGCATGAGCATTCACTCTATTGAAGAACAACCACTTTGGCAAAACAGGA
AGCCCTTGTTCCATGTCGAATACAAACATTGAAGAACCGTGATTGCCAGA
ACCAGTATATACACTCTCAAATTTAGCAATTAACACATCATCATGGGTCT
TTCCACTTCCTGTAAAGAGGACTGCTATAGAAATCCTTGATAATAGGATT
TCCTT
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