CV884850

Overview
NameCV884850
Unique NameCV884850
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884850 vs. ExPASy Swiss-Prot
Match: VAC8_CRYNE (Vacuolar protein 8 OS=Cryptococcus neoformans GN=VAC8 PE=3 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.668e-15
Identity = 53/162 (32.72%), Postives = 86/162 (53.09%), Query Frame = 3
Query:  378 LKPFEHEVEKGSAFALGLLAVKPEHQQLIVDNGALSHLVN-LLKRHMDSNCSRAVNSVIRRAADAITNLAHENSSIKTRVRMEGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKK 860
            L   + EV++ ++ ALG LAV  E++ L+V  G L  L+  +L  +++  C+         A   ITNLA  + + KT++   G + PL  L +  D +VQR A GAL  +   +DEN+ Q+V   A+P L+ +L S D+ + Y     + N+   + N KK
Sbjct:   95 LSSHDPEVQRAASAALGNLAVNAENKLLVVSLGGLEPLIRQMLSPNVEVQCN---------AVGCITNLATHDEN-KTQIAKSGALVPLTRLAKSKDMRVQRNATGALLNMTH-SDENRQQLVAAGAIPVLVSLLNSPDTDVQYYCTTALSNIAVDAANRKK 245          
BLAST of CV884850 vs. ExPASy Swiss-Prot
Match: VAC8_DEBHA (Vacuolar protein 8 OS=Debaryomyces hansenii GN=VAC8 PE=3 SV=4)

HSP 1 Score: 81.2629 bits (199), Expect = 8.279e-15
Identity = 53/161 (32.92%), Postives = 87/161 (54.04%), Query Frame = 3
Query:  378 LKPFEHEVEKGSAFALGLLAVKPEHQQLIVDNGALSHLVNLLKRHMDSNCSRAVNSVIRRAADAITNLAHENSSIKTRVRMEGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKK 860
            L+  + EV++ +  ALG LAV  E++ LIV+ G L  L+   ++ M +N     N+V       ITNLA ++ + KT++   G + PL +L +  D +VQR A GAL  +     EN+ ++V   A+P L+ +L +ED+ + Y     + N+     N KK
Sbjct:   96 LQSADSEVQRAACGALGNLAVNNENKILIVEMGGLEPLI---RQMMSTNIEVQCNAV-----GCITNLATQDDN-KTKIAKSGALIPLAKLAKSKDIRVQRNATGALLNMTHSG-ENRQELVNAGAVPVLVSLLSNEDADVQYYCTTALSNIAVDEMNRKK 246          
BLAST of CV884850 vs. ExPASy Swiss-Prot
Match: VAC8_ASPFU (Vacuolar protein 8 OS=Aspergillus fumigatus GN=vac8 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.412e-14
Identity = 55/162 (33.95%), Postives = 88/162 (54.32%), Query Frame = 3
Query:  378 LKPFEHEVEKGSAFALGLLAVKPEHQQLIVDNGALSHLVNLLKRHMDSNCSRAVNSVIRRAADAITNLA-HENSSIKTRVRMEGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKK 860
            L+  + EV++ ++ ALG LAV  E++ LIV   AL  L  L+++ M  N     N+V       ITNLA HE++  K ++   G + PL+ L +  D +VQR A GAL  +   +D+N+ Q+V   A+P L+ +L S D  + Y     + N+   + N K+
Sbjct:  115 LQSSDIEVQRAASAALGNLAVNAENKVLIV---ALGGLTPLIRQMMSPNVEVQCNAV-----GCITNLATHEDN--KAKIARSGALGPLIRLAKSKDMRVQRNATGALLNMTH-SDDNRQQLVNAGAIPVLVQLLSSPDVDVQYYCTTALSNIAVDASNRKR 265          
BLAST of CV884850 vs. ExPASy Swiss-Prot
Match: VAC8_CANAL (Vacuolar protein 8 OS=Candida albicans GN=VAC8 PE=3 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.844e-14
Identity = 52/161 (32.30%), Postives = 87/161 (54.04%), Query Frame = 3
Query:  378 LKPFEHEVEKGSAFALGLLAVKPEHQQLIVDNGALSHLVNLLKRHMDSNCSRAVNSVIRRAADAITNLAHENSSIKTRVRMEGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKK 860
            L+  + EV++ +  ALG LAV  E++ LIV+ G L  L+   ++ M +N     N+V       ITNLA ++ + K+++   G + PL +L +  D +VQR A GAL  +     EN+ ++V   A+P L+ +L +ED+ + Y     + N+     N KK
Sbjct:   96 LQSADSEVQRAACGALGNLAVNTENKILIVEMGGLEPLI---RQMMSTNIEVQCNAV-----GCITNLATQDDN-KSKIAKSGALIPLTKLAKSKDIRVQRNATGALLNMTHSG-ENRQELVNAGAVPVLVSLLSNEDADVQYYCTTALSNIAVDEVNRKK 246          
BLAST of CV884850 vs. ExPASy Swiss-Prot
Match: VAC8_ASPOR (Vacuolar protein 8 OS=Aspergillus oryzae GN=vac8 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.409e-14
Identity = 54/162 (33.33%), Postives = 88/162 (54.32%), Query Frame = 3
Query:  378 LKPFEHEVEKGSAFALGLLAVKPEHQQLIVDNGALSHLVNLLKRHMDSNCSRAVNSVIRRAADAITNLA-HENSSIKTRVRMEGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKK 860
            L+  + EV++ ++ ALG LAV  +++ LIV   AL  L  L+++ M  N     N+V       ITNLA HE++  K ++   G + PL+ L +  D +VQR A GAL  +   +D+N+ Q+V   A+P L+ +L S D  + Y     + N+   + N K+
Sbjct:  115 LQSSDIEVQRAASAALGNLAVNADNKVLIV---ALGGLAPLIRQMMSPNVEVQCNAV-----GCITNLATHEDN--KAKIARSGALGPLIRLAKSKDMRVQRNATGALLNMTH-SDDNRQQLVNAGAIPVLVQLLSSSDVDVQYYCTTALSNIAVDASNRKR 265          
BLAST of CV884850 vs. ExPASy Swiss-Prot
Match: VAC8_CHAGB (Vacuolar protein 8 OS=Chaetomium globosum GN=VAC8 PE=3 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 4.109e-14
Identity = 54/156 (34.62%), Postives = 82/156 (52.56%), Query Frame = 3
Query:  396 EVEKGSAFALGLLAVKPEHQQLIVDNGALSHLVNLLKRHMDSNCSRAVNSVIRRAADAITNLA-HENSSIKTRVRMEGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKK 860
            EV++ ++ ALG LAV  +++ LIV  G L  L+   K+ M  N     N+V       ITNLA HE +  K ++   G + PL  L +  D +VQR A GAL  +   +DEN+ Q+V   A+P L+ +L S D  + Y     + N+   + N +K
Sbjct:  102 EVQRAASAALGNLAVNTDNKVLIVQLGGLQPLI---KQMMSPNVEVQCNAV-----GCITNLATHEEN--KAKIARSGALGPLTRLAKSKDMRVQRNATGALLNMTH-SDENRQQLVNAGAIPVLVQLLSSSDVDVQYYCTTALSNIAVDANNRRK 246          
BLAST of CV884850 vs. ExPASy Swiss-Prot
Match: VAC8_YARLI (Vacuolar protein 8 OS=Yarrowia lipolytica GN=VAC8 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13
Identity = 47/162 (29.01%), Postives = 87/162 (53.70%), Query Frame = 3
Query:  378 LKPFEHEVEKGSAFALGLLAVKPEHQQLIVDNGALSHLVN-LLKRHMDSNCSRAVNSVIRRAADAITNLAHENSSIKTRVRMEGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKK 860
            L+  + ++++ ++ ALG LAV  E++ LIV+ G    L+  ++  +++  C+         A   ITNLA   ++ K+++   G + PL +L +  D +VQR A GAL  +   +D+N+ ++V   A+P L+ +L S D  + Y +   + N+     N KK
Sbjct:  117 LQNTDPDIQRAASAALGNLAVNNENKVLIVEMGGFEPLIRQMMSPNVEVQCN---------AVGCITNLATHEAN-KSKIARSGALLPLTKLAKSKDMRVQRNATGALLNMTH-SDQNRQELVNAGAIPILVSLLSSRDPDVQYYSTTALSNIAVDESNRKK 267          
BLAST of CV884850 vs. ExPASy Swiss-Prot
Match: VAC8_CANGA (Vacuolar protein 8 OS=Candida glabrata GN=VAC8 PE=3 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 4.543e-13
Identity = 51/161 (31.68%), Postives = 83/161 (51.55%), Query Frame = 3
Query:  378 LKPFEHEVEKGSAFALGLLAVKPEHQQLIVDNGALSHLVNLLKRHMDSNCSRAVNSVIRRAADAITNLAHENSSIKTRVRMEGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKK 860
            L+  + +++  +  ALG LAV  E++ LIVD G L  L+N +   M +N     N+V       ITNLA  + + K ++   G + PL +L +    +VQR A GAL  +   ++EN+ ++V   A+P L+ +L S D  + Y     + N+     N KK
Sbjct:   94 LQSQDPQIQVAACAALGNLAVNNENKLLIVDMGGLEPLINQM---MGTNVEVQCNAV-----GCITNLATRDDN-KHKIATSGALVPLTKLAKSKHIRVQRNATGALLNMTH-SEENRRELVNAGAVPVLVSLLSSNDPDVQYYCTTALSNIAVDEANRKK 244          
BLAST of CV884850 vs. ExPASy Swiss-Prot
Match: VAC8_ASHGO (Vacuolar protein 8 OS=Ashbya gossypii GN=VAC8 PE=3 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 1.322e-12
Identity = 47/162 (29.01%), Postives = 85/162 (52.47%), Query Frame = 3
Query:  378 LKPFEHEVEKGSAFALGLLAVKPEHQQLIVDNGALSHLVNLLK-RHMDSNCSRAVNSVIRRAADAITNLAHENSSIKTRVRMEGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKK 860
            L+  + +++  +  ALG LAV  E++ LIV+ G L  L+  +K  +++  C+         A   ITNLA ++ + K ++   G + PL +L +  + +VQR A GAL  +     EN+ ++V+  A+P L+ +L S D+ + Y     + N+     N +K
Sbjct:   94 LQSHDPQIQIAACAALGNLAVNNENKILIVEMGGLEPLIEQMKSNNVEVQCN---------AVGCITNLATQDDN-KAKIAHSGALVPLTKLAKSKNIRVQRNATGALLNMTHSG-ENRKELVDAGAVPVLVSLLSSSDADVQYYCTTALSNIAVDESNRRK 244          
BLAST of CV884850 vs. ExPASy Swiss-Prot
Match: VAC8_YEAST (Vacuolar protein 8 OS=Saccharomyces cerevisiae GN=VAC8 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.945e-12
Identity = 50/161 (31.06%), Postives = 82/161 (50.93%), Query Frame = 3
Query:  378 LKPFEHEVEKGSAFALGLLAVKPEHQQLIVDNGALSHLVNLLKRHMDSNCSRAVNSVIRRAADAITNLAHENSSIKTRVRMEGGIPPLVELLEFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDSAIHYEAVGVIGNLVHSSPNIKK 860
            L+  + +++  +  ALG LAV  E++ LIV+ G L  L+N +   M  N     N+V       ITNLA  + + K ++   G + PL +L +    +VQR A GAL  +   ++EN+ ++V   A+P L+ +L S D  + Y     + N+     N KK
Sbjct:   94 LQSQDPQIQVAACAALGNLAVNNENKLLIVEMGGLEPLINQM---MGDNVEVQCNAV-----GCITNLATRDDN-KHKIATSGALIPLTKLAKSKHIRVQRNATGALLNMTH-SEENRKELVNAGAVPVLVSLLSSTDPDVQYYCTTALSNIAVDEANRKK 244          
The following BLAST results are available for this feature:
BLAST of CV884850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
VAC8_CRYNE1.668e-1532.72Vacuolar protein 8 OS=Cryptococcus neoformans GN=V... [more]
VAC8_DEBHA8.279e-1532.92Vacuolar protein 8 OS=Debaryomyces hansenii GN=VAC... [more]
VAC8_ASPFU1.412e-1433.95Vacuolar protein 8 OS=Aspergillus fumigatus GN=vac... [more]
VAC8_CANAL1.844e-1432.30Vacuolar protein 8 OS=Candida albicans GN=VAC8 PE=... [more]
VAC8_ASPOR2.409e-1433.33Vacuolar protein 8 OS=Aspergillus oryzae GN=vac8 P... [more]
VAC8_CHAGB4.109e-1434.62Vacuolar protein 8 OS=Chaetomium globosum GN=VAC8 ... [more]
VAC8_YARLI2.663e-1329.01Vacuolar protein 8 OS=Yarrowia lipolytica GN=VAC8 ... [more]
VAC8_CANGA4.543e-1331.68Vacuolar protein 8 OS=Candida glabrata GN=VAC8 PE=... [more]
VAC8_ASHGO1.322e-1229.01Vacuolar protein 8 OS=Ashbya gossypii GN=VAC8 PE=3... [more]
VAC8_YEAST2.945e-1231.06Vacuolar protein 8 OS=Saccharomyces cerevisiae GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011A03_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884850 ID=CV884850; Name=CV884850; organism=Citrus sinensis; type=EST; length=884bp
ATTTGATGGATCCACAGAGACGCCAAGGGCCGAGCGTCCCCGAGAGGAAG
GGGCAAAAGCGGAAACTAGATGAAGAAACAGTGATCGGAGACGAGCAGCA
GCAGATGCAACAACGAGAGATCTCGTCTTCTTCTGCTGGAACTTCTTCAT
CCGATGCGCGGCAAGCGCTATTGAGCGAGGTCAGTGCTCAGGTTAACGTC
CTTAACACCACTTTCTCTTGGCTCGAAGCCGATCGCGCTGCGGCTAAACG
CGCCACTCACGTCCTCGCCGAGCTCGCCAAGAACGAGGAGGTTGTGAACT
GGATTGTCGAAGGTGGCGCGGTTCCCGCTCTTGTGAAGCATCTACAGGCG
CCGCCGACGAGTGAAGCTGACCGGAATTTGAAGCCTTTTGAGCATGAAGT
CGAGAAAGGAAGCGCTTTTGCTCTTGGACTTCTTGCTGTAAAGCCAGAGC
ATCAGCAACTCATAGTTGATAATGGCGCATTGTCACATCTAGTGAATTTG
CTGAAGAGGCACATGGACAGTAATTGTTCCCGTGCCGTGAATAGTGTTAT
TAGAAGAGCAGCTGATGCTATCACCAACCTTGCTCACGAGAACAGCAGCA
TCAAAACCCGTGTCAGGATGGAAGGTGGGATTCCACCTCTGGTTGAGTTG
CTTGAATTTACTGACACAAAAGTGCAAAGAGCAGCTGCTGGTGCCCTGCG
AACTTTGGCATTTAAAAACGATGAAAATAAGAATCAGATTGTTGAATGTA
ATGCTCTTCCTACCCTCATTCTTATGCTACGATCTGAAGATTCTGCTATA
CATTATGAAGCGGTTGGAGTAATTGGGAATCTGGTACATTCATCCCCCAA
CATAAAGAAAGAAGTTCTTGCTGCTGGGGCATTG
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