CV884789
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884789 vs. ExPASy Swiss-Prot
Match: PGLR_VITVI (Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1) HSP 1 Score: 322.013 bits (824), Expect = 3.056e-87 Identity = 146/238 (61.34%), Postives = 184/238 (77.31%), Query Frame = 1 Query: 220 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITI 933 R HS S+ +FG VGDG TLNTKAFQ+A+ L+ + +GGA+L+VPAG+WLTGSF L SH TL+L +DAV+L S + WPVI PLPSYGRGR+ GR+ SLIFG NLTDV+ITGDNGTIDGQG +WW+ F G L YTRP+L+ELM S + ISNLT LN P W +HPVY ++ +Q +TI AP+ SPNTDGI+PDS + I+DCYI +GDD V++KSGWDEYGI+YG P+ ++ I Sbjct: 59 RAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVI 296
BLAST of CV884789 vs. ExPASy Swiss-Prot
Match: PGLR3_ARATH (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.018e-22 Identity = 84/239 (35.15%), Postives = 126/239 (52.72%), Query Frame = 1 Query: 208 LEVFRP-HSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPL------PSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGIS 903 L++F +++ +T+FGAVGDGVT +++AF A + S G + VPAG +T L + GS S PV + PS G + G + + ++F ++ +VI GD G I+GQGS WWE G+ RP ++ + + +S LT L+ P IH C++V + ++ I AP SPNTDGID +S +V I+DC I+TGDD ++I SG IS Sbjct: 15 LQIFTSSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCS--GTGDGQFVVPAG------------MTFML-QPLKFQGSCKST--PVFVQMLGKLVAPSKGNWK---GDKDQWILF-TDIEGLVIEGD-GEINGQGSSWWE--HKGS----RPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHIS 225
BLAST of CV884789 vs. ExPASy Swiss-Prot
Match: ADPG2_ARATH (Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 6.490e-21 Identity = 74/223 (33.18%), Postives = 106/223 (47.53%), Query Frame = 1 Query: 223 PHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWE--WFRNGTLDYTR-PHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 882 P +VS+++FGA GDG T +T+AF NA + + + G L VP G +L K + G NS I S + R + ++F V GD G +DG G WW+ RN T+ P + NS +I+ NL N I CS+V+V NV + AP DSPNTDGI ++ ++ + + I TGDD +SI+SG Sbjct: 65 PTTVSVSDFGAKGDGKTDDTQAFVNA--WKKACSSNGAVNLLVPKGN-------------TYLLKSIQLTGPCNSILTVQIFGTLSASQKRSDYKDISKWIMFDGVNNLSVDGGDTGVVDGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG 272
BLAST of CV884789 vs. ExPASy Swiss-Prot
Match: PGLR2_CHAOB (Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.161e-16 Identity = 72/222 (32.43%), Postives = 105/222 (47.30%), Query Frame = 1 Query: 235 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWF------RNGTLDYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 882 ++ ++GAVGDG +T+AF N+ K A L VPA + +++L + S D V P P+ + ++ L F + LTD + G G IDGQG WW R D RP +++ S V + LT +N P + + C VK+Q + I+AP DSPNTDGID +S I+ C I TGDD ++I +G Sbjct: 60 NVEQYGAVGDGKHDSTEAFATT---WNAACKKASAVLLVPANKKF-----FVNNLVFRGPCQPHL--SFKVDGTIVAQPDPARWKNSKI------WLQFAQ-LTDFNLMG-TGVIDGQGQQWWAGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG 263
BLAST of CV884789 vs. ExPASy Swiss-Prot
Match: PGLR2_CRYJA (Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.075e-15 Identity = 69/227 (30.40%), Postives = 101/227 (44.49%), Query Frame = 1 Query: 235 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLIS-----HLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWW----EWFRNGTL--DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 882 ++ ++GAVGDG T+AF A + K A L VP + + + H T +D +I N +W +R + LT + G G IDGQG WW +W + D RP ++ STG+II L +N P + + C VK+ ++I AP DSPNTDGID +S + ++ I TGDD V+I +G Sbjct: 60 NVEKYGAVGDGKHDCTEAFSTA---WQAACKKPSAMLLVPGNKKFVVNNLFFNGPCQPHFTFKVD--GIIAAYQNPASWK-----------------NNRIWLQFAKLTGFTLMG-KGVIDGQGKQWWAGQCKWVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTG 263
BLAST of CV884789 vs. ExPASy Swiss-Prot
Match: PGLR2_JUNAS (Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.951e-15 Identity = 70/222 (31.53%), Postives = 106/222 (47.75%), Query Frame = 1 Query: 235 SITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWW----EWFRNGTL--DYTRPHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 882 ++ +GAVGDG +T AF+ N+ +K A VPA + ++++L + S D P P+ + ++ + F R LTD + G G IDGQG+ WW + T+ D RP +++ S V + LT N P + + C VK+Q + I+AP DSPNTDGID +S I+ C I TGDD V++ +G Sbjct: 61 NVEHYGAVGDGKHDSTDAFEKT---WNAACNKLSAVFLVPANKKF-----VVNNLVFYGPCQPHF--SFKVDGTIAAYPDPAKWKNSKI------WMHFAR-LTDFNLMG-TGVIDGQGNRWWSDQCKTINGRTVCNDKGRPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDGIDIFASKRFEIEKCTIGTGDDCVAVGTG 264
BLAST of CV884789 vs. ExPASy Swiss-Prot
Match: PGLR2_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.186e-14 Identity = 64/234 (27.35%), Postives = 110/234 (47.01%), Query Frame = 1 Query: 229 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT--LWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVI-------ISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGIS 903 S IT+ GA G+G T +TKA Q A + ++ G + +P G +L G + + + D +L +T+ + H + I + ++VITG G +DGQG W +N T+ + +++ ++ V+ +S +T LN F+ ++ C ++ +++VT+ AP DSPNTDGI S + I + I GDD +SI G + I+ Sbjct: 40 SFDITKLGASGNGKTDSTKAVQEA--WASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYK-----------------EHGNWIEILRVDNLVITG-KGNLDGQGPAVWS--KNSC---TKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNIT 248
BLAST of CV884789 vs. ExPASy Swiss-Prot
Match: PGLR1_ARATH (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.450e-14 Identity = 70/223 (31.39%), Postives = 102/223 (45.74%), Query Frame = 1 Query: 223 PHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSD-TWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTR--PHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 882 P IT+FGAVGDG T KAF N ++ A L VP G +L G + G S T VI + + G P +F R + ++V+TG GT G+G W+ G P ++ N V I+ ++ +N + + V +V +QN+ + AP +SPNTDGI ++D+V I D I+TGDD VS+ G Sbjct: 49 PTVYDITKFGAVGDGSTNTFKAFLNT--WIQVCDSPVPATLLVPKGTFLAGP--------------VIFAGPCKSKVTVNVIGTIIATTSGYATP----EWFLFER-VDNLVLTG-TGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGRG 249
BLAST of CV884789 vs. ExPASy Swiss-Prot
Match: PGLR1_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.505e-14 Identity = 64/234 (27.35%), Postives = 109/234 (46.58%), Query Frame = 1 Query: 229 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLT--LWLDKDAVILGSTNSDTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPHLVELMNSTGVI-------ISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSGWDEYGIS 903 S IT+ GA G+G T +TKA Q A + ++ G + +P G +L G + + + D +L +T+ + H + I + ++VITG G +DGQG W +N T+ + +++ ++ V+ +S +T LN F+ ++ C + +++VT+ AP DSPNTDGI S + I + I GDD +SI G + I+ Sbjct: 40 SFDITKLGASGNGKTDSTKAVQEA--WASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYK-----------------DHGNWIEILRVDNLVITG-KGNLDGQGPAVWS--KNSC---TKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNIT 248
BLAST of CV884789 vs. ExPASy Swiss-Prot
Match: ADPG1_ARATH (Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.004e-13 Identity = 63/224 (28.12%), Postives = 102/224 (45.54%), Query Frame = 1 Query: 229 SVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNS-DTWPVIDPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTR-----PHLVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDVCIKDCYISTGDDLVSIKSG 882 +VS++ FGA GDG T +T+AF+ A + + + G VP G+ +L K G S + ++ L + + + H ++ N + G G I+G G WW+ + +D ++ P + L N + + NL N I C+ V+V NV I AP DSPNTDGI ++ ++ + + I TGDD +SI+ G Sbjct: 67 TVSVSNFGAKGDGKTDDTQAFKKA--WKKACSTNGVTTFLVPKGK-------------TYLLKSTRFRGPCKSLRNFQILGTLSASTKRSDYKDKNHWLILEDVNNLS-IDGGSTGIINGNGKTWWQ--NSCKIDKSKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDG 272 The following BLAST results are available for this feature:
BLAST of CV884789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884789 ID=CV884789; Name=CV884789; organism=Citrus sinensis; type=EST; length=940bpback to top |