CV884775

Overview
NameCV884775
Unique NameCV884775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length938
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884775 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 7.557e-54
Identity = 113/245 (46.12%), Postives = 157/245 (64.08%), Query Frame = -2
Query:  206 KMVIRLLPIWATTILFWSTYAQMITFSVEQATTMQRSIGNFKIPAASLTVFFVAAILITLGAYDRLIIPLLKKRKGKP-GFSNLQLIAIGLFLSALGMASASVVEVKRLAVAKANGTTGTTLPISVFYLIPQFFLVGSGEGFMYTGQLDFFITQSPKGMKTMXXXXXXXXXXXXXXXXXXLVSIVKAATGSNGKHGWVGENINKGRLDCFYGLLAALSFINFGLFLLCASWYKRKKAKQVPEMEI 937
            K ++R+LPIWAT ILFW+ +AQ+ T SV Q+ T+ RSIG+F+IP AS+ VF+V  +L+T   YDR+ I L KK    P G   LQ I +GLF  ++ MA A++VE+KRL  A A+G T  TLP+  + LIPQ+ +VG GE  +YTGQLDFF+ + PKGMK M                  LV+IV+  TG    H W+ +++NKGRL  FY L+A L  +NF +FL+ + WY  K+ K++ E+ I
Sbjct:  337 KQIVRMLPIWATCILFWTVHAQLTTLSVAQSETLDRSIGSFEIPPASMAVFYVGGLLLTTAVYDRVAIRLCKKLFNYPHGLRPLQRIGLGLFFGSMAMAVAALVELKRLRTAHAHGPTVKTLPLGFYLLIPQYLIVGIGEALIYTGQLDFFLRECPKGMKGMSTGLLLSTLALGFFFSSVLVTIVEKFTGK--AHPWIADDLNKGRLYNFYWLVAVLVALNFLIFLVFSKWYVYKE-KRLAEVGI 578          
BLAST of CV884775 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.526e-46
Identity = 97/239 (40.59%), Postives = 149/239 (62.34%), Query Frame = -2
Query:  230 KMVIRLLPIWATTILFWSTYAQMITFSVEQATTMQRSIGNFKIPAASLTVFFVAAILITLGAYDRLIIPLLKKRKG-KPGFSNLQLIAIGLFLSALGMASASVVEVKRLAVAKANG--TTGTTLPISVFYLIPQFFLVGSGEGFMYTGQLDFFITQSPKGMKTMXXXXXXXXXXXXXXXXXXLVSIVKAATGSNGKHGWVGENINKGRLDCFYGLLAALSFINFGLFLLCASWYKRKKA 937
            K++IR+ PIWA+ I+F + YAQM T  V+Q   M   IG+F++P A+L  F  A+++I +  YDR I+PL +K  G   GF+ +Q + IGLF+S L MA+A++VE+ RL +A   G   +G  +PISV + IPQ+F++G+ E F + GQL+FF  QSP  M+++                  ++++V   T  NG+ GW+ +N+N G LD F+ LLA LS +N  ++   A+ YK+KKA
Sbjct:  345 KILIRMFPIWASGIIFSAVYAQMSTMFVQQGRAMNCKIGSFQLPPAALGTFDTASVIIWVPLYDRFIVPLARKFTGVDKGFTEIQRMGIGLFVSVLCMAAAAIVEIIRLHMANDLGLVESGAPVPISVLWQIPQYFILGAAEVFYFIGQLEFFYDQSPDAMRSLCSALALLTNALGNYLSSLILTLVTYFTTRNGQEGWISDNLNSGHLDYFFWLLAGLSLVNMAVYFFSAARYKQKKA 583          
BLAST of CV884775 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.993e-46
Identity = 101/238 (42.44%), Postives = 145/238 (60.92%), Query Frame = -2
Query:  233 KMVIRLLPIWATTILFWSTYAQMITFSVEQATTMQRSIG-NFKIPAASLTVFFVAAILITLGAYDRLIIPLLKKRKG-KPGFSNLQLIAIGLFLSALGMASASVVEVKRLAVAKANGTTGT-TLPISVFYLIPQFFLVGSGEGFMYTGQLDFFITQSPKGMKTMXXXXXXXXXXXXXXXXXXLVSIVKAATGSNGKHGWVGENINKGRLDCFYGLLAALSFINFGLFLLCASWYKRKK 937
            K +IRLLPIWAT I+F S Y+QM T  V Q  T+ + +G NFKIP+ASL++F   ++L     YD+LI+P  +K  G + GF+ LQ I IGL +S   M SA ++EV RL   + +      T+P+++F+ +PQ+FLVG  E F + GQL+FF  Q+P  M+++                  LV++V   T S G+ GW+ +N+N G LD F+ LLA LSF+NF ++L  A WY  KK
Sbjct:  327 KALIRLLPIWATGIVFASVYSQMGTVFVLQGNTLDQHMGPNFKIPSASLSLFDTLSVLFWAPVYDKLIVPFARKYTGHERGFTQLQRIGIGLVISIFSMVSAGILEVARLNYVQTHNLYNEETIPMTIFWQVPQYFLVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTAIAFGNYLSTFLVTLVTKVTRSGGRPGWIAKNLNNGHLDYFFWLLAGLSFLNFLVYLWIAKWYTYKK 564          
BLAST of CV884775 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.519e-43
Identity = 98/239 (41.00%), Postives = 143/239 (59.83%), Query Frame = -2
Query:  230 KMVIRLLPIWATTILFWSTYAQMITFSVEQATTMQRSIG-NFKIPAASLTVFFVAAILITLGAYDRLIIPLLKK-RKGKPGFSNLQLIAIGLFLSALGMASASVVEVKRLAVAKA-NGTTGTTLPISVFYLIPQFFLVGSGEGFMYTGQLDFFITQSPKGMKTMXXXXXXXXXXXXXXXXXXLVSIVKAATGSNGKHGWVGENINKGRLDCFYGLLAALSFINFGLFLLCASWYKRKKA 937
            K +I LLP+WAT I+F + Y+QM T  V Q  TM + +G NF+IP+ASL++F   ++L     YD+ IIPL +K  + + GF+ LQ + IGL +S   M +A V+EV RL   K  N      + +S+F+ IPQ+ L+G  E F + GQL+FF  Q+P  M+++                  LV++V   T  NGK GW+ +N+N+G LD F+ LLA LSF+NF ++L  +  YK KKA
Sbjct:  327 KSIITLLPVWATGIVFATVYSQMSTMFVLQGNTMDQHMGKNFEIPSASLSLFDTVSVLFWTPVYDQFIIPLARKFTRNERGFTQLQRMGIGLVVSIFAMITAGVLEVVRLDYVKTHNAYDQKQIHMSIFWQIPQYLLIGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVALGNYLSTVLVTVVMKITKKNGKPGWIPDNLNRGHLDYFFYLLATLSFLNFLVYLWISKRYKYKKA 565          
BLAST of CV884775 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.301e-33
Identity = 86/236 (36.44%), Postives = 131/236 (55.51%), Query Frame = -2
Query:  245 KMVIRLLPIWATTILFWSTYAQMITFSVEQATTMQRSI-GNFKIPAASLTVFFVAAILITLGAYDRLIIPLLKKRKGKP-GFSNLQLIAIGLFLSALGMASASVVEVKRLAVAKANGT---TGTTLPISVFYLIPQFFLVGSGEGFMYTGQLDFFITQSPKGMKTMXXXXXXXXXXXXXXXXXXLVSIVKAATGSNGKHGWVGENINKGRLDCFYGLLAALSFINFGLFLLCASWY 937
            K ++R+LP+   T +     AQ+ T  V+Q TT+ R + G+F IP ASL+ F   ++LI++  YDR+ + + +K  G P G + LQ + IGL    L M  ASV E  RL VA  +G    TG  LP+++F L+PQF L+G  + F+   +L+FF  Q+P+ MK++                  L+S V   T   G+ GW+  N+N+ RLD +Y   A L+ +NF LFL+   +Y
Sbjct:  327 KQMLRMLPVLFITFVPSMMLAQINTLFVKQGTTLDRKVTGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPRGITLLQRMGIGLIFHILIMIVASVTERYRLKVAADHGLIHQTGVKLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSFLLSTVSEITKKRGR-GWILNNLNESRLDYYYLFFAVLNLVNFVLFLVVVKFY 561          
BLAST of CV884775 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.062e-31
Identity = 81/237 (34.18%), Postives = 132/237 (55.70%), Query Frame = -2
Query:  242 KMVIRLLPIWATTILFWSTYAQMITFSVEQATTMQRSI-GNFKIPAASLTVFFVAAILITLGAYDRLIIPLLKKRKGKP-GFSNLQLIAIGLFLSALGMASASVVEVKRLAVAKANGTTGTT---LPISVFYLIPQFFLVGSGEGFMYTGQLDFFITQSPKGMKTMXXXXXXXXXXXXXXXXXXLVSIVKAATGSNGKHGWVGENINKGRLDCFYGLLAALSFINFGLFLLCASWYK 937
            K ++++LP+   T +     AQ++T  ++Q TT+ R +  NF IP ASL  F   ++L+++  YDR+ +  ++K  G P G + LQ + IG+ L  L M  AS+ E  RL VA  +G T  T   +P+S+F L+PQ+ L+G  + F+   +L+FF  Q+P+ MK++                  L+S V   T   G+ GW+  N+N+ RLD +Y   A L+ +NF LFL+   +Y+
Sbjct:  327 KQMLKMLPVLFVTFVPSMMLAQIMTLFIKQGTTLDRRLTNNFSIPPASLLGFTTFSMLVSIVIYDRVFVKFMRKLTGNPRGITLLQRMGIGMILHILIMIIASITERYRLKVAAEHGLTHQTAVPIPLSIFTLLPQYVLMGLADAFIEIAKLEFFYDQAPESMKSLGTSYTSTSMAVGYFMSSILLSSVSQITKKQGR-GWIQNNLNESRLDNYYMFFAVLNLLNFILFLVVIRFYE 562          
BLAST of CV884775 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.270e-31
Identity = 87/263 (33.08%), Postives = 139/263 (52.85%), Query Frame = -2
Query:  173 KMVIRLLPIWATTILFWSTYAQMITFSVEQATTMQRSIG----NFKIPAASLTVFFVAAILITLGAYDRLIIPLLKKRKGKPGFSNLQL-IAIGLFLSALGMASASVVEVKRLAVAKANG---TTGTTLPISVFYLIPQFFLVGSGEGFMYTGQLDFFITQSPKGMKTMXXXXXXXXXXXXXXXXXXLVSIVKAATGSNGKHGWVGENINKGRLDCFYGLLAALSFINFGLFLLCASWYKRKKAKQVPEMEIIVKGSSVEEKL 937
            K +I+++PIW+T I+  S      +F + QAT+M R +     +F++PA S  +F + A+ + +  YDR +IPL  K +G+P   +++L + +GLF+S L MA +++VE  R   A + G    +   + IS  +L+PQ+ L G  E     GQ +FF T+ PK M ++                  +++ V   T  NGK  WV +NINKG  + +Y +LA +SFIN   +++C SW       QV      V G   EE+L
Sbjct:  329 KALIKVIPIWSTGIMM-SINTSQSSFQLLQATSMDRRLSRHGSSFQVPAGSFGMFTIIALALWVILYDRAVIPLASKIRGRPFRLSVKLRMGLGLFMSFLAMAISAMVESFRRKKAISQGYANNSNAVVDISAMWLVPQYVLHGLAEALTAIGQTEFFYTEFPKSMSSIAASLFGLGMAVASLLASVVLNAVNELTSRNGKESWVSDNINKGHYNYYYWVLAIMSFINVIYYVIC-SWSYGPLVDQVRNGR--VNGVREEEEL 587          
BLAST of CV884775 vs. ExPASy Swiss-Prot
Match: S15A4_XENLA (Solute carrier family 15 member 4 OS=Xenopus laevis GN=slc15a4 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.628e-19
Identity = 72/248 (29.03%), Postives = 125/248 (50.40%), Query Frame = -2
Query:  227 KMVIRLLPIWATTILFWSTYAQMITFSVEQATTM---QRSIGNFKIPAASLTVFFVAAILITLGAYDRLIIPLLKKRKGKPGFSNLQLIAIGLFLSALGMASASVVEVKRLAVAKAN-------GTTGTTLPISVFYLIPQFFLVGSGEGFMYTGQLDFFITQSPKGMKTMXXXXXXXXXXXXXXXXXXLVSIVK-AATGSNGKHGWVGENINKGRLDCFYGLLAALSFINFGLFLLCASWYKRKKAK 937
            K +++++P++   I +W+ Y QM T  V Q+  +   Q    N  +PAA LT+F    ILI +   D+L+ P LKKR   P  S L+ IA+G+F     + +A ++E +RL + K +         T     ++V++ +PQ+ L+G  E F     L+F  + +PK M+++                  L+++V     G    H  +G NIN   L+ ++ LLAA+      LFL+ +  Y+R+++K
Sbjct:  320 KALVKIIPVFLALIPYWTVYFQMQTTYVLQSLHLRIPQIFNNNHTLPAAWLTMFDAVLILILIPLKDKLVDPFLKKRGLLP--SPLKRIAVGMFFVMCSVLAAGILESERLEIVKRDKIQQQIGNVTYYAANLTVWWQLPQYILIGISEIFASIAGLEFAYSAAPKSMQSVIMGLFFFFSGIGSFVGSGLLALVSIPQIGWMSNHSDLG-NINGCTLNYYFFLLAAVQAATLLLFLIISVKYERQQSK 564          
BLAST of CV884775 vs. ExPASy Swiss-Prot
Match: S15A4_RAT (Solute carrier family 15 member 4 OS=Rattus norvegicus GN=Slc15a4 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.649e-17
Identity = 70/251 (27.89%), Postives = 124/251 (49.40%), Query Frame = -2
Query:  227 KMVIRLLPIWATTILFWSTYAQMITFSVEQATTMQR------SIGNFKIPAASLTVFFVAAILITLGAYDRLIIPLLKKRKGKPGFSNLQLIAIGLFLSALGMASASVVEVKRLAVAKA---NGTTGTTL----PISVFYLIPQFFLVGSGEGFMYTGQLDFFITQSPKGMKTMXXXXXXXXXXXXXXXXXXLVSIVK-AATGSNGKHGWVGENINKGRLDCFYGLLAALSFINFGLFLLCASWYKRKKAK 937
            K +++++P++   I +W+ Y QM T  V Q+  ++       +  +  +PAA LT+F    IL+ +   D+L+ P+L++    P  S+L+ IA+G+F       +A ++E KRL + K    N T G  +     + +++ IPQ+ L+G  E F     L+F  + +PK M++                   L+++V   A G    H   G NIN   L  ++ LLAA+      LFL+ +  Y R++A+
Sbjct:  315 KALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLKIPEISSITTTHHTLPAAWLTMFDAVLILLLIPLKDKLVDPVLRRHGLLP--SSLKRIAVGMFFVTCSAFAAGILESKRLDLVKEKTINQTIGGVVYHAADLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGSFVGSGLLALVSLKAIGWMSSHTDFG-NINSCHLHYYFFLLAAIQGATLLLFLIVSVKYDRQRAR 562          
BLAST of CV884775 vs. ExPASy Swiss-Prot
Match: S15A3_RAT (Solute carrier family 15 member 3 OS=Rattus norvegicus GN=Slc15a3 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.150e-16
Identity = 72/264 (27.27%), Postives = 120/264 (45.45%), Query Frame = -2
Query:  233 KMVIRLLPIWATTILFWSTYAQMITFSVEQ----------------ATTMQRSIGNFKIPAASLTVFFVAAILITLGAYDRLIIPLLKKRKGKPGFSNLQLIAIGLFLSALGMASASVVEVKRLAVAKANGTTGTTL--------PISVFYLIPQFFLVGSGEGFMYTGQLDFFITQSPKGMKTMXXXXXXXXXXXXXXXXXXLVSIVKAATGSNGKHGWV-----GENINKGRLDCFYGLLAALSFINFGLFLLCASWYKRKK 937
            ++++++LP+  T + +W  Y QM +  V Q                +  ++    N++IP A L +  VA ILI +   D LI PLL + K  P  S LQ +A+G+F     +  A V+E +RL    AN T    +        P+S+++ IPQ+ L+G  E F     L+F  +++P+ M+                    LV+++          GW+       NIN  R+D ++ LLA +  +   LFL  A  Y+R +
Sbjct:  313 QVLLKVLPVMVTLVPYWMVYFQMQSTYVLQGLHLHIPNIFRTNPNISLPLRSDSSNYRIPEAWLLLANVAVILILVPVKDHLIDPLLLRCKLLP--SALQKMALGMFFGFTSIIVAGVLEKERLQYIAANQTVPQLIGKDLYYAAPLSIWWQIPQYLLIGISEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSGLVALLSL------PGGWMYCPKDFGNINNCRMDLYFFLLAGIQAVTAVLFLWIAGRYERTR 568          
The following BLAST results are available for this feature:
BLAST of CV884775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
CHL1_ARATH7.557e-5446.12Nitrate/chlorate transporter OS=Arabidopsis thalia... [more]
PTR2_ARATH1.526e-4640.59Peptide transporter PTR2 OS=Arabidopsis thaliana G... [more]
PTR5_ARATH1.993e-4642.44Peptide transporter PTR5 OS=Arabidopsis thaliana G... [more]
PTR1_ARATH3.519e-4341.00Peptide transporter PTR1 OS=Arabidopsis thaliana G... [more]
PTR3A_ARATH3.301e-3336.44Peptide transporter PTR3-A OS=Arabidopsis thaliana... [more]
PTR3B_ARATH1.062e-3134.18Peptide transporter PTR3-B OS=Arabidopsis thaliana... [more]
PTR2X_ARATH5.270e-3133.08Probable peptide transporter At1g52190 OS=Arabidop... [more]
S15A4_XENLA4.628e-1929.03Solute carrier family 15 member 4 OS=Xenopus laevi... [more]
S15A4_RAT9.649e-1727.89Solute carrier family 15 member 4 OS=Rattus norveg... [more]
S15A3_RAT2.150e-1627.27Solute carrier family 15 member 3 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010E06_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T7_E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884775 ID=CV884775; Name=CV884775; organism=Citrus sinensis; type=EST; length=938bp
TTTTTTTTCCATACGATGGTAGGCTATGAATAAAAATTACACTACCGTAC
TATGTAATTTTCTTTCCGCACTTCTAATTTTACATTATTTATGAAAATTG
CAATAAAAGAAGAATCACACCAATATATCACTCCTTAACCTGAATTTGGC
GTGCATGGAGTATCAGAAGCTAGAGCTTCTCTTCAACTGAAGAACCTTTG
ACTATAATCTCCATTTCTGGAACCTGTTTAGCTTTTTTCCTCTTGTACCA
TGAAGCACAAAGCAGAAACAATCCAAAATTAATGAAGCTTAATGCAGCTA
AAAGCCCATAGAAACAATCAAGTCTCCCTTTGTTTATATTCTCTCCTACC
CAACCATGTTTACCATTGCTTCCAGTTGCAGCCTTCACAATGGAAACTAA
AAGGCTGCTGAAAAAGAACCCAAGTGAGAGTGTTGTGAGGAACAGACCGG
TGCTCATTGTTTTCATTCCTTTAGGTGACTGAGTGATGAAGAAATCTAGC
TGCCCAGTGTACATAAATCCTTCTCCAGAACCCACCAAGAAAAATTGTGG
GATCAAATAGAAAACTGAGATGGGTAAAGTTGTTCCTGTTGTGCCATTAG
CTTTCGCGACTGCCAGACGTTTCACCTCTACTACTGACGCTGATGCCATT
CCTAATGCTGACAAGAAGAGGCCTATGGCTATCAATTGCAGATTGCTAAA
TCCTGGTTTGCCTTTCCTCTTTTTCAAAAGTGGAATAATCAACCGATCAT
AAGCTCCGAGAGTGATCAGTATGGCTGCTACAAAGAAGACGGTGAGGGAA
GCAGCTGGAATTTTGAAATTTCCTATGGATCTCTGCATGGTGGTAGCTTG
TTCCACCGAGAATGTGATCATCTGTGCATATGTTGACCAAAATAGGATTG
TTGTTGCCCAAATAGGAAGTAGTCTAATCACCATCTTC
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