EY665323

Overview
NameEY665323
Unique NameEY665323
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665323 vs. ExPASy Swiss-Prot
Match: CAF2P_ARATH (CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana GN=At1g23400 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.946e-17
Identity = 48/111 (43.24%), Postives = 66/111 (59.46%), Query Frame = 2 
Query:   35 WKRAIESTKALVPDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGSQSENYDKXXXXXXXXXXXXXXXXXXXXXXVVPLGSLPVDHITERLQRK 367
            W+RA+ES+KA++ +E++LGPDDLLKKVEE EG S AAEH+Y A+VLS  DGA+    + +D S+    D                       V P+GSLPVD I  +L+ +
Sbjct:  458 WQRALESSKAVILEELDLGPDDLLKKVEELEGTSLAAEHTYTAMVLSNTDGAAEDYVDEKDRSEEYYSD------IDDDFDDECSDDESLDPVGPVGSLPVDKIVRKLRER 562
The following BLAST results are available for this feature:
BLAST of EY665323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CAF2P_ARATH9.946e-1743.24CRS2-associated factor 2, chloroplastic OS=Arabido... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-E12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665323 ID=EY665323; Name=EY665323; organism=Citrus sinensis; type=EST; length=957bp
TGCATTATATCAAGTCCTAAAATGACCCCTTTATTGGAAGCGCGCAATTG
AATCAACCAAGGCATTGGTACCCGATGAGATTAATCTTGGTCCTGATGAT
CTTTTGAAGAAGGTTGAAGAATTTGAGGGTATTTCACAGGCCGCAGAGCA
CTCCTATCCAGCGTTAGTTTTGTCAAGGGAAGACGGTGCCAGTAGTTCAA
TGGCAGAGTACGAAGATGGTTCTCAAAGTGAGAATTATGACAAATATGAA
TTTTATCCTGAGGATGACTTCAACGATGACGATGAATTTTATGATAGTGA
CTCATCTGATGTTGTCCCATTAGGGTCATTACCTGTTGATCATATAACAG
AGAGGCTCCAGCGGAAATGAATTCAAAGTAAAGAAAGATCATTTGCACTC
CTTTTGGCTCGTGGTGAAGTTTTGTACCATTAAATAAATGTGTACAAGGA
ATGTTAATTGATGTCACGGGGACGGGTCCATTCTTCTGTGTCCGAAGGGT
AGGGGACGGTGGAGGGGGTTTCATCAGGAGCTTATAAAATCTGGCCCCTC
CTTTTAAGTCGATTGATGGAGGTTGATGTCAGTAAGGGGACCGGGGGTTA
CCCAAATAGGTAATTGAAAGAACTGGTATGAGGAATATACCGTAAAAAAC
GTCCCCCTAACACAAATTAGGGAATTGCGTAATTATCCGGAAAAAAAACA
AAAGGGAGCCGTTTATAAGATACTGTTTATTAAATGAGATGAAATCAAAC
TTTGCGAGGTGTGAGTAGCAATTGCAGGGCGGTGATTACAGTGAAGTGGG
GGATAATGATAGTCGGAATAAAAGAGAGTAAATAACAATTAAGATAAGAA
GAGAACAATGAACACATATCAGCTTTAATAATGGAATTACATGAGACTAG
GGTCTATTGTGGGATGTTACATAGGTATGTAAGGAGTGAAGAATTTCGAA
TGCTCGA
back to top