CV884774

Overview
NameCV884774
Unique NameCV884774
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884774 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.779e-46
Identity = 100/235 (42.55%), Postives = 139/235 (59.15%), Query Frame = 1
Query:    1 GICSICMFTAILIFLSGTRRYRYKKCSGSPIVHICQXXXXXXXXXXXELPSSTASLYE---------DYPEESRIQHTYQFRCLDKASVVTNTDYSEDGAFVSNPWTLCPVTRVEEVKMVIRLLPIWATTILFWSTYAQMITFSVEQATTMQRSIGNFKIPAASLTVFFVAAILITLGAYDRLIIPLLKKRKGKP-GFSNLQLIAIGLFLSALGMASASVVEVKRLAVAKANGTT 675
            GIC+  +  A+ +FL+GT RYR+KK  GSP+  +             ELP+  + LY+             + ++ HT QFR LDKA++           F  N WTL  +T VEEVK ++R+LPIWAT ILFW+ +AQ+ T SV Q+ T+ RSIG+F+IP AS+ VF+V  +L+T   YDR+ I L KK    P G   LQ I +GLF  ++ MA A++VE+KRL  A A+G T
Sbjct:  222 GICAFAIVLALSVFLAGTNRYRFKKLIGSPMTQVAAVIVAAWRNRKLELPADPSYLYDVDDIIAAEGSMKGKQKLPHTEQFRSLDKAAIRDQEAGVTSNVF--NKWTLSTLTDVEEVKQIVRMLPIWATCILFWTVHAQLTTLSVAQSETLDRSIGSFEIPPASMAVFYVGGLLLTTAVYDRVAIRLCKKLFNYPHGLRPLQRIGLGLFFGSMAMAVAALVELKRLRTAHAHGPT 454          
BLAST of CV884774 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.239e-39
Identity = 94/230 (40.87%), Postives = 138/230 (60.00%), Query Frame = 1
Query:    1 GICSICMFTAILIFLSGTRRYRYKKCSGSPIVHICQXXXXXXXXXXXELPSSTASLYEDYPEES------RIQHTYQFRCLDKASVVTNTDYSEDGAFVSNPWTLCPVTRVEEVKMVIRLLPIWATTILFWSTYAQMITFSVEQATTMQRSIGNFKIPAASLTVFFVAAILITLGAYDRLIIPLLKKRKG-KPGFSNLQLIAIGLFLSALGMASASVVEVKRLAVAKANG 669
            GI ++ M  AI  F  GT  YR++K  GSPI  I Q           ++P     LYE   + S      +I+HT   + LDKA+V++  + S+ G + SN W LC VT+VEE+K++IR+ PIWA+ I+F + YAQM T  V+Q   M   IG+F++P A+L  F  A+++I +  YDR I+PL +K  G   GF+ +Q + IGLF+S L MA+A++VE+ RL +A   G
Sbjct:  233 GIPTVFMGLAIASFFFGTPLYRFQKPGGSPITRISQVVVASFRKSSVKVPEDATLLYETQDKNSAIAGSRKIEHTDDCQYLDKAAVISEEE-SKSGDY-SNSWRLCTVTQVEELKILIRMFPIWASGIIFSAVYAQMSTMFVQQGRAMNCKIGSFQLPPAALGTFDTASVIIWVPLYDRFIVPLARKFTGVDKGFTEIQRMGIGLFVSVLCMAAAAIVEIIRLHMANDLG 460          
BLAST of CV884774 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.565e-38
Identity = 91/224 (40.62%), Postives = 132/224 (58.93%), Query Frame = 1
Query:    1 GICSICMFTAILIFLSGTRRYRYKKCSGSPIVHICQXXXXXXXXXXXELPSSTASLYEDYPEES------RIQHTYQFRCLDKASVVTNTDYSEDGAFVSNPWTLCPVTRVEEVKMVIRLLPIWATTILFWSTYAQMITFSVEQATTMQRSIG-NFKIPAASLTVFFVAAILITLGAYDRLIIPLLKKRKG-KPGFSNLQLIAIGLFLSALGMASASVVEVKRL 648
            G+ ++ M  A++ F +G+  YR +K  GSP+  + Q           ++P   + LYE+   ES      +++HT      DKA+V T +D    GA  S+ W LC VT+VEE+K +IRLLPIWAT I+F S Y+QM T  V Q  T+ + +G NFKIP+ASL++F   ++L     YD+LI+P  +K  G + GF+ LQ I IGL +S   M SA ++EV RL
Sbjct:  215 GVPTVAMAIAVVFFFAGSNFYRLQKPGGSPLTRMLQVIVASCRKSKVKIPEDESLLYENQDAESSIIGSRKLEHTKILTFFDKAAVETESD--NKGAAKSSSWKLCTVTQVEELKALIRLLPIWATGIVFASVYSQMGTVFVLQGNTLDQHMGPNFKIPSASLSLFDTLSVLFWAPVYDKLIVPFARKYTGHERGFTQLQRIGIGLVISIFSMVSAGILEVARL 436          
BLAST of CV884774 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.755e-37
Identity = 89/230 (38.70%), Postives = 133/230 (57.83%), Query Frame = 1
Query:    1 GICSICMFTAILIFLSGTRRYRYKKCSGSPIVHICQXXXXXXXXXXXELPSSTASLYEDYPEESRIQ------HTYQFRCLDKASVVTNTDYSEDGAFVSNPWTLCPVTRVEEVKMVIRLLPIWATTILFWSTYAQMITFSVEQATTMQRSIG-NFKIPAASLTVFFVAAILITLGAYDRLIIPLLKK-RKGKPGFSNLQLIAIGLFLSALGMASASVVEVKRLAVAKAN 666
            G+ ++ M  A+  F  G+R YR ++  GSP+  I Q           ++P   + L+E   +ES I+      HT   +  DKA+V + +D  +DG    NPW LC VT+VEE+K +I LLP+WAT I+F + Y+QM T  V Q  TM + +G NF+IP+ASL++F   ++L     YD+ IIPL +K  + + GF+ LQ + IGL +S   M +A V+EV RL   K +
Sbjct:  215 GVPTVAMVIAVCFFFFGSRFYRLQRPGGSPLTRIFQVIVAAFRKISVKVPEDKSLLFETADDESNIKGSRKLVHTDNLKFFDKAAVESQSDSIKDGEV--NPWRLCSVTQVEELKSIITLLPVWATGIVFATVYSQMSTMFVLQGNTMDQHMGKNFEIPSASLSLFDTVSVLFWTPVYDQFIIPLARKFTRNERGFTQLQRMGIGLVVSIFAMITAGVLEVVRLDYVKTH 442          
BLAST of CV884774 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.524e-25
Identity = 76/233 (32.62%), Postives = 118/233 (50.64%), Query Frame = 1
Query:    1 GICSICMFTAILIFLSGTRRYRYKKCSGSPIVHICQXXXXXXXXXXXELPSSTASLYEDYPEESR------IQHTYQFRCLDKASVVTNTDYSEDGAFVSNPWTLCPVTRVEEVKMVIRLLPIWATTILFWSTYAQMITFSVEQATTMQRSI-GNFKIPAASLTVFFVAAILITLGAYDRLIIPLLKKRKGKP-GFSNLQLIAIGLFLSALGMASASVVEVKRLAVAKANGTT 675
            G+ ++ +  +I IFL GTR YR+K   GSP   + +            + S +   YE  P E        I  T   R L++AS+ T + +          W LC +T VEE K ++++LP+   T +     AQ++T  ++Q TT+ R +  NF IP ASL  F   ++L+++  YDR+ +  ++K  G P G + LQ + IG+ L  L M  AS+ E  RL VA  +G T
Sbjct:  222 GLSTLGLAFSIFIFLLGTRLYRHKLPMGSPFTKMARVIVASLRKAREPMSSDSTRFYELPPMEYASKRAFPIHSTSSLRFLNRASLKTGSTHK---------WRLCTITEVEETKQMLKMLPVLFVTFVPSMMLAQIMTLFIKQGTTLDRRLTNNFSIPPASLLGFTTFSMLVSIVIYDRVFVKFMRKLTGNPRGITLLQRMGIGMILHILIMIIASITERYRLKVAAEHGLT 445          
BLAST of CV884774 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.217e-24
Identity = 78/231 (33.77%), Postives = 117/231 (50.65%), Query Frame = 1
Query:    1 GICSICMFTAILIFLSGTRRYRYKKCSGSPIVHICQXXXXXXXXXXXELPSSTASLYE----DYPEESR--IQHTYQFRCLDKASVVTNTDYSEDGAFVSNPWTLCPVTRVEEVKMVIRLLPIWATTILFWSTYAQMITFSVEQATTMQRSI-GNFKIPAASLTVFFVAAILITLGAYDRLIIPLLKKRKGKP-GFSNLQLIAIGLFLSALGMASASVVEVKRLAVAKANG 669
            G+ ++ +  +I IFL GT  YR+K  +GSP   + +            +     S +E    +Y  +    I  T   R LD+AS+ T T++          W LC  T VEE K ++R+LP+   T +     AQ+ T  V+Q TT+ R + G+F IP ASL+ F   ++LI++  YDR+ + + +K  G P G + LQ + IGL    L M  ASV E  RL VA  +G
Sbjct:  222 GLPTLGLAISITIFLLGTPFYRHKLPTGSPFTKMARVIVASFRKANAPMTHDITSFHELPSLEYERKGAFPIHPTPSLRFLDRASLKTGTNHK---------WNLCTTTEVEETKQMLRMLPVLFITFVPSMMLAQINTLFVKQGTTLDRKVTGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPRGITLLQRMGIGLIFHILIMIVASVTERYRLKVAADHG 443          
BLAST of CV884774 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.772e-21
Identity = 73/232 (31.47%), Postives = 123/232 (53.02%), Query Frame = 1
Query:    1 GICSICMFTAILIFLSGTRRYRYKKCSGSPIVHICQXXXXXXXXXXXELPSSTASLYEDYP-EESRIQHTYQ-FRCLDKASVVTNTD--YSEDGAFVSNPWTLCPVTRVEEVKMVIRLLPIWATTILFWSTYAQMITFSVEQATTMQRSI----GNFKIPAASLTVFFVAAILITLGAYDRLIIPLLKKRKGKPGFSNLQL-IAIGLFLSALGMASASVVEVKRLAVAKANG 669
            G+ ++ M  A L+F+  +  Y  +  + S    + Q            LP    S    Y  ++S I+   Q  R L+KA +++N +     DG F  NPW LC   +VEE+K +I+++PIW+T I+  S      +F + QAT+M R +     +F++PA S  +F + A+ + +  YDR +IPL  K +G+P   +++L + +GLF+S L MA +++VE  R   A + G
Sbjct:  218 GVPAVLMLIAALLFILASPLYVTRGVTKSLFTGLAQAIVAAYKKRKLSLPDHHDSFDCYYHMKDSEIKAPSQKLRFLNKACLISNREEEIGSDG-FALNPWRLCTTDKVEELKALIKVIPIWSTGIMM-SINTSQSSFQLLQATSMDRRLSRHGSSFQVPAGSFGMFTIIALALWVILYDRAVIPLASKIRGRPFRLSVKLRMGLGLFMSFLAMAISAMVESFRRKKAISQG 447          
BLAST of CV884774 vs. ExPASy Swiss-Prot
Match: S15A4_XENLA (Solute carrier family 15 member 4 OS=Xenopus laevis GN=slc15a4 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.697e-13
Identity = 61/222 (27.48%), Postives = 100/222 (45.05%), Query Frame = 1
Query:    4 ICSICMFTAILIFLSGTRRYRYKKCSGSPIVHICQXXXXXXXXXXXELPSSTASLYEDYPEESRIQHTYQFRCLDKASVVTNTDYSEDGAFVSNPWTLCPVTRVEEVKMVIRLLPIWATTILFWSTYAQMITFSVEQATTM---QRSIGNFKIPAASLTVFFVAAILITLGAYDRLIIPLLKKRKGKPGFSNLQLIAIGLFLSALGMASASVVEVKRLAVAK 660
            I ++C+  + L+FL G   +  K   GS    + +               S     E+       QH ++   LD A       + ED              +VE+VK +++++P++   I +W+ Y QM T  V Q+  +   Q    N  +PAA LT+F    ILI +   D+L+ P LKKR   P  S L+ IA+G+F     + +A ++E +RL + K
Sbjct:  235 IPAVCIGVSFLVFLCGKTVFVTKPADGSAFTDMVKILAYFCC--------SRKHTRENTRNIQNNQHRHKQSRLDMAKASHGGPFRED--------------KVEDVKALVKIIPVFLALIPYWTVYFQMQTTYVLQSLHLRIPQIFNNNHTLPAAWLTMFDAVLILILIPLKDKLVDPFLKKRGLLP--SPLKRIAVGMFFVMCSVLAAGILESERLEIVK 432          
BLAST of CV884774 vs. ExPASy Swiss-Prot
Match: S15A4_HUMAN (Solute carrier family 15 member 4 OS=Homo sapiens GN=SLC15A4 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.075e-11
Identity = 59/225 (26.22%), Postives = 103/225 (45.78%), Query Frame = 1
Query:    4 ICSICMFTAILIFLSGTRRYRYKKCSGSPIVHICQXXXXXXXXXXXELPSSTASLYEDYPEESRIQHTYQFRCLDKASVVTNTDYSEDGAFVSNPWTLCPVTRVEEVKMVIRLLPIWATTILFWSTYAQMITFSVEQATTMQ-RSIGNFK-----IPAASLTVFFVAAILITLGAYDRLIIPLLKKRKGKPGFSNLQLIAIGLFLSALGMASASVVEVKRLAVAK 660
            I ++C+  A ++FL G   +  K   GS    + +            L  S  S       +S  +    F+   K S+  +   S  G F           +VE+VK +++++P++   I +W+ Y QM T  V Q+  ++   I N       +PAA LT+F    IL+ +   D+L+ P+L++    P  S+L+ IA+G+F       +A ++E KRL + K
Sbjct:  228 IPTVCVGLAFVVFLCGQSVFITKPPDGSAFTDMFKI-----------LTYSCCSQKRSGERQSNGEGIGVFQQSSKQSLFDSCKMSHGGPFTEE--------KVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEISNITTTPHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLP--SSLKRIAVGMFFVMCSAFAAGILESKRLNLVK 431          
BLAST of CV884774 vs. ExPASy Swiss-Prot
Match: S15A4_BOVIN (Solute carrier family 15 member 4 OS=Bos taurus GN=SLC15A4 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11
Identity = 58/231 (25.11%), Postives = 104/231 (45.02%), Query Frame = 1
Query:    4 ICSICMFTAILIFLSGTRRYRYKKCSGSPIVHICQXXXXXXXXXXXELPSSTASLYEDYPEESRIQHTYQ------FRCLDKASVVTNTDYSEDGAFVSNPWTLCPVTRVEEVKMVIRLLPIWATTILFWSTYAQMITFSVEQATTMQR------SIGNFKIPAASLTVFFVAAILITLGAYDRLIIPLLKKRKGKPGFSNLQLIAIGLFLSALGMASASVVEVKRLAVAK 660
            I ++C+  A ++FL G   +  K   GS    + +                   +Y   P++   +H+        F+   K S+  +   S  G F        P  +VE+VK +++++P++   I +W+ Y QM T  V Q+  ++       +      PAA LT+F    IL+ +   D+L+ P+LK+    P  S+L+ IA+G+F       +A ++E KRL + K
Sbjct:  221 IPAVCIGVAFVVFLCGQTFFITKPPDGSAFTDMFRIL-----------------VYSCRPQKRIREHSPSGEGIGVFQQSSKHSLFDSCKMSRGGPF--------PEDKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLKIPEISSITTNPHTFPAAWLTMFDAVLILLLIPLKDKLVDPILKRNGLLP--SSLKRIAVGMFFVMCSAFAAGILESKRLDLVK 424          
The following BLAST results are available for this feature:
BLAST of CV884774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
CHL1_ARATH5.779e-4642.55Nitrate/chlorate transporter OS=Arabidopsis thalia... [more]
PTR2_ARATH5.239e-3940.87Peptide transporter PTR2 OS=Arabidopsis thaliana G... [more]
PTR5_ARATH7.565e-3840.63Peptide transporter PTR5 OS=Arabidopsis thaliana G... [more]
PTR1_ARATH3.755e-3738.70Peptide transporter PTR1 OS=Arabidopsis thaliana G... [more]
PTR3B_ARATH2.524e-2532.62Peptide transporter PTR3-B OS=Arabidopsis thaliana... [more]
PTR3A_ARATH6.217e-2433.77Peptide transporter PTR3-A OS=Arabidopsis thaliana... [more]
PTR2X_ARATH3.772e-2131.47Probable peptide transporter At1g52190 OS=Arabidop... [more]
S15A4_XENLA1.697e-1327.48Solute carrier family 15 member 4 OS=Xenopus laevi... [more]
S15A4_HUMAN2.075e-1126.22Solute carrier family 15 member 4 OS=Homo sapiens ... [more]
S15A4_BOVIN6.036e-1125.11Solute carrier family 15 member 4 OS=Bos taurus GN... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010E06_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T3_E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884774 ID=CV884774; Name=CV884774; organism=Citrus sinensis; type=EST; length=677bp
GGAATATGTTCCATCTGCATGTTTACGGCTATCCTGATATTTTTATCAGG
AACTCGAAGATACAGATACAAGAAATGCTCGGGCAGTCCCATAGTCCACA
TTTGCCAGGTTGTTGTGGCTGCCAGAAAGAAAAGGAAGGTTGAATTACCT
TCCAGTACTGCCTCCTTATACGAGGATTACCCCGAGGAATCCAGAATCCA
GCACACATATCAGTTCCGTTGCTTGGACAAGGCGTCGGTTGTGACAAATA
CTGATTACAGTGAAGATGGTGCCTTCGTCAGCAATCCTTGGACGCTTTGT
CCGGTCACAAGGGTCGAGGAGGTGAAGATGGTGATTAGACTACTTCCTAT
TTGGGCAACAACAATCCTATTTTGGTCAACATATGCACAGATGATCACAT
TCTCGGTGGAACAAGCTACCACCATGCAGAGATCCATAGGAAATTTCAAA
ATTCCAGCTGCTTCCCTCACCGTCTTCTTTGTAGCAGCCATACTGATCAC
TCTCGGAGCTTATGATCGGTTGATTATTCCACTTTTGAAAAAGAGGAAAG
GCAAACCAGGATTTAGCAATCTGCAATTGATAGCCATAGGCCTCTTCTTG
TCAGCATTAGGAATGGCATCAGCGTCAGTAGTAGAGGTGAAACGTCTGGC
AGTCGCGAAAGCTAATGGCACAACAGG
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