EY665322

Overview
NameEY665322
Unique NameEY665322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length988
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 7.164e-66
Identity = 131/186 (70.43%), Postives = 146/186 (78.49%), Query Frame = 1
Query:   46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591
            MATSAIQQSAFAGQTAL+QSNE V K+G   GGR++MRRTVKSAP SIWYGPDRPKYLGPFS+Q PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEILSKNGVKFGE++    W FK   ++    G DYL   P     ++  AIW   ++ L GF  G ++ GG
Sbjct:    1 MATSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAV----W-FKAGSQIFSEGGLDYL-GNPNLIHAQSILAIWA-CQVVLMGFVEGYRVGGG 179          
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.596e-65
Identity = 132/186 (70.97%), Postives = 145/186 (77.96%), Query Frame = 1
Query:   46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591
            MATSAIQQSAFAGQTAL+  NE VRK+G   GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNGV FGE++    W FK   ++    G DYL   P     ++  AIW  A++ L GF  G ++ GG
Sbjct:    1 MATSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAV----W-FKAGSQIFSEGGLDYL-GNPNLIHAQSILAIWA-AQVVLMGFVEGYRVGGG 179          
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 6.065e-65
Identity = 129/186 (69.35%), Postives = 146/186 (78.49%), Query Frame = 1
Query:   46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591
            MATSAI+QSAFAGQTAL+  NE VRK+G  +GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNGVKFGE++    W FK   ++    G DYL   P     ++  A+W  +++ L G   G ++ GG
Sbjct:    1 MATSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAV----W-FKAGSQIFSEGGLDYL-GNPNLIHAQSILAVWA-SQVVLMGLIEGYRVGGG 179          
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 2.548e-63
Identity = 127/186 (68.28%), Postives = 145/186 (77.96%), Query Frame = 1
Query:   46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591
            MATS IQQSAFAGQT L+  NE VRKVG  +GGR++MRRT+KSAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L+KNGVKFGE++    W FK   ++    G DYL  P      ++  AIW   ++ L G   G ++ GG
Sbjct:    1 MATSTIQQSAFAGQTLLKPQNELVRKVG-GNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAV----W-FKAGSQIFQEGGLDYLGNPNLVH-AQSILAIWA-CQVVLMGAVEGYRVGGG 178          
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 5.677e-63
Identity = 128/186 (68.82%), Postives = 141/186 (75.81%), Query Frame = 1
Query:   46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591
            MAT AIQQSAF GQ   +  NEF+RKVG    GRITMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNGVKFGE++    W FK   ++    G DYL  P      ++  AIW   ++ L GF  G ++ GG
Sbjct:    1 MATCAIQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAV----W-FKAGSQIFSEGGLDYLGNPNLVH-AQSILAIWA-CQVVLMGFVEGYRVGGG 179          
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 7.414e-63
Identity = 126/186 (67.74%), Postives = 141/186 (75.81%), Query Frame = 1
Query:   46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591
            MATSAIQQSAF G+T LRQ NEF+RK G     R TMRRTVKSAP+SIWYGPDRPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGC FPE+L KNGVKFGE++    W FK   ++    G DYL   P     ++  AIW   ++ L GF  G ++ GG
Sbjct:    1 MATSAIQQSAFTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAV----W-FKAGSQIFAEGGLDYL-GNPNLIHAQSILAIWA-TQVVLMGFVEGYRVGGG 179          
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 3.680e-62
Identity = 126/186 (67.74%), Postives = 145/186 (77.96%), Query Frame = 1
Query:   46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591
            MA SAIQ SAFAGQTAL+Q +E VRKVGV+DG R +MRRTVK+ PQSIWYG DRPK+LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+FPE+LSKNGV+FGE++    W FK   ++    G DYL  P      ++  AIW   ++ L G   G ++ GG
Sbjct:    1 MAASAIQSSAFAGQTALKQRDELVRKVGVSDG-RFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAV----W-FKAGAQIFSEGGLDYLGNPNLVH-AQSILAIWA-TQVVLMGLIEGYRVGGG 178          
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.890e-58
Identity = 125/186 (67.20%), Postives = 142/186 (76.34%), Query Frame = 1
Query:   46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591
            MA SA+ Q+     TA R+ +E VR+VG + GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGE++    W FK   ++    G DYL  P      ++  AIW   ++ L GF  G ++ GG
Sbjct:    1 MAASALHQTTSFLGTAPRR-DELVRRVGDS-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAV----W-FKAGAQIFSEGGLDYLGNPNLVH-AQSILAIWA-VQVVLMGFVEGYRVGGG 177          
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.890e-58
Identity = 125/186 (67.20%), Postives = 142/186 (76.34%), Query Frame = 1
Query:   46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591
            MA SA+ Q+     TA R+ +E VR+VG + GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGE++    W FK   ++    G DYL  P      ++  AIW   ++ L GF  G ++ GG
Sbjct:    1 MAASALHQTTSFLGTAPRR-DELVRRVGDS-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAV----W-FKAGAQIFSEGGLDYLGNPNLVH-AQSILAIWA-VQVVLMGFVEGYRVGGG 177          
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 7.940e-57
Identity = 122/188 (64.89%), Postives = 140/188 (74.47%), Query Frame = 1
Query:   46 MAT-SAIQQSAFAGQTALR-QSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591
            MAT SAIQ S+ AGQT LR Q NE V+KVG A   RITMRRTV+SAP+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCVFPE+L+KNG+KFGE++    W FK   ++    G DY    P     ++  AIW   ++ L G   G ++ GG
Sbjct:    1 MATASAIQSSSLAGQTLLRPQQNELVKKVGTAQA-RITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAV----W-FKAGAQIFSEGGLDYA-GNPNLIHAQSILAIWA-CQVVLMGLIEGYRVGGG 180          
The following BLAST results are available for this feature:
BLAST of EY665322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CB21_GOSHI7.164e-6670.43Chlorophyll a-b binding protein 151, chloroplastic... [more]
CB26_PETSP1.596e-6570.97Chlorophyll a-b binding protein 37, chloroplastic ... [more]
CB23_TOBAC6.065e-6569.35Chlorophyll a-b binding protein 36, chloroplastic ... [more]
CB21_SILPR2.548e-6368.28Chlorophyll a-b binding protein, chloroplastic (Fr... [more]
CB24_SOLLC5.677e-6368.82Chlorophyll a-b binding protein 4, chloroplastic O... [more]
CB215_PEA7.414e-6367.74Chlorophyll a-b binding protein 215, chloroplastic... [more]
CB21_LEMGI3.680e-6267.74Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB23_ORYSJ1.890e-5867.20Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB23_ORYSI1.890e-5867.20Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB21_PINTH7.940e-5764.89Chlorophyll a-b binding protein type I, chloroplas... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665322 ID=EY665322; Name=EY665322; organism=Citrus sinensis; type=EST; length=988bp
AAAGAAGCTTCAGCAACAACCCGTAAAGCTTTCGCATAAGAACATATGGC
AACCTCTGCTATCCAACAATCAGCATTTGCTGGCCAGACCGCCTTGAGGC
AATCCAATGAGTTTGTCCGCAAGGTTGGAGTTGCTGACGGTGGCCGTATC
ACCATGAGGAGGACTGTCAAATCCGCTCCCCAGAGCATCTGGTACGGCCC
AGACCGCCCAAAGTACTTGGGACCATTCTCTGAGCAAACACCATCATACT
TGACTGGTGAGTTCCCTGGTGACTATGGCTGGGATACCGCTGGTTTATCA
GCAGACCCCGAGACATTTGCTAAGAACCGTGAGCTAGAGGTGATCCACAG
CAGATGGGCAATGCTTGGAGCTCTTGGCTGCGTCTTCCCTGAAATCCTCT
CCAAGAATGGAGTGAAGTTCGGCGAAAGCATTTTGGGTTCAGGCTGGCGC
TTCAAATATTCTCCGAAGGTGGGCTTTGACTATCTTTGGCCACCCCCACC
CCCATTCTTGCTCAAAGCATTTTGGGCTATCTGGGGCCCTGCCAGGTTGT
GCTTATGGGGTTTTTGTTGAGGGAAAAAAATTTGGGGGGGGGCCCCCTGG
GGAAAAGGATTTTACCCCCTTTTTCCCGGGGGGGGGTTTTTGACCCCCCT
TTGTTTTGGGTTAAGAACCCCAATTCATTTTTTCTAAAGTTAAAGGGTAA
AGGAGGACCCAAAAAATGGGGCCGCCGGGGTTTATTTTTTCCCCAGGGTT
TTGGAATTTTTTTGTTCCGGGGCTTATGTGCCCCGGGGGGAAGGGGGACC
AAATTTAGAAAAACCTTCTAAAAAAACCCCTTTTGAGTAAAATCCGGGGG
GGGCCAAAAAGATGGCCCGGGGGGATTTTTAACCCCCATAATAATTTTTT
TTTTTCTCCCCGGAGAAAAAATAAAAAAAAAAAAAAACCCCAGGGATAAA
AAATGGGGGTGGGGGGGGGGTTTGTTCTTTCTTTTTCT
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