CV884765
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884765 vs. ExPASy Swiss-Prot
Match: PP438_ARATH (Pentatricopeptide repeat-containing protein At5g60960, mitochondrial OS=Arabidopsis thaliana GN=At5g60960 PE=2 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 3.512e-84 Identity = 159/256 (62.11%), Postives = 189/256 (73.83%), Query Frame = 3 Query: 87 FSRFSPTR---YLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAGEMYRGGFELGTVAYNCILDCVSKL 845 FS P+R + F S+ FSS+ + +++D + IA S S EL N +A+ ISQR +L FSH+TP P L+ TLN SPEAGRA LGFN WL N+NFSHTDET+SFF DYFGRRKDFK + + + K + G KTL S IDRLVRAGRP QV FFE+ME DYG KRDK+SL LVV+KLCE G+AS AEK+VK+TANEIFPD+ ICDLLI GWC+ KLDEA RLAGEM RGGFE+GT AYN +LDCV KL Sbjct: 40 FSPLPPSRSSIFSTFPSRFFSSETNAESESLDSNE--IALSFSKELTGNPDAESQTISQRFNLSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKL 293
BLAST of CV884765 vs. ExPASy Swiss-Prot
Match: PP150_ARATH (Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.233e-12 Identity = 50/193 (25.91%), Postives = 86/193 (44.56%), Query Frame = 3 Query: 279 VTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLV-----VEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAGEMYRGGFELGTVAYNCILDCVSK 842 ++ TP+L+ TL + L F +L + S T + + D GR + F + +V+ + P+T + RL+ AG Q + F+ D + RLV ++ LC+ GY A + + E D+K+ +LI GWC ++D A++ EM G E V YN +L+ + + Sbjct: 67 ISLTPNLIHQTLLRLRHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDILGRVRQFDVVRQLIVEMDQT-SPETFLILVKRLIAAGLTRQAVRAFD----DAPCFLENRRFRLVEFGFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLVEMIESGIEPNVVTYNVLLNGICR 254
BLAST of CV884765 vs. ExPASy Swiss-Prot
Match: PP112_ARATH (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12 Identity = 51/188 (27.13%), Postives = 84/188 (44.68%), Query Frame = 3 Query: 288 TPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD--NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIF-PDDKICDLLIKGWCVDGKLDEAKRLAGEMYRGGFELGTVAYNCILDCVSK 842 +P+L++ L AG L W F HT + + G+ K FK I + D K++L +T A R RA + + +G F +ME ++GFK + +++ L ++ A+K+ + F PD K +L++GW + L + EM GFE VAY I++ K Sbjct: 93 SPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKME-EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCK 279
BLAST of CV884765 vs. ExPASy Swiss-Prot
Match: PP211_ARATH (Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidopsis thaliana GN=At3g04130 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.363e-11 Identity = 43/191 (22.51%), Postives = 87/191 (45.55%), Query Frame = 3 Query: 267 IFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFL--VDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAGEMYRGGFELGTVAYNCILDC 833 I V + LV L+ + R+ LG W H+ + D G+ K + + +F+ + +++ T+A + R AG + +G F+R+ ++G +++ +S+ L+++ LC+ A ++ + I P+ ++ I GWC +++EA EM GF ++Y I+ C Sbjct: 79 ICKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLG-EFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRC 268
BLAST of CV884765 vs. ExPASy Swiss-Prot
Match: PPR54_ARATH (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.780e-11 Identity = 45/170 (26.47%), Postives = 77/170 (45.29%), Query Frame = 3 Query: 345 LGFNHWLTQNANFSH-TDETLSFFTDYFGRRKDFKA---IHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAGEMYRGGFELGTVAYNCILDCVSK 842 L F +W T ++ H + + D G+ + F + D + + +T I R VRAG ++ + F RME DYG DK + +V+ L AS A+ + PD + L++GWC G++ EA+++ EM G E Y+ ++D + + Sbjct: 134 LAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME-DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCR 302
BLAST of CV884765 vs. ExPASy Swiss-Prot
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.834e-11 Identity = 44/183 (24.04%), Postives = 80/183 (43.72%), Query Frame = 3 Query: 291 PSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVD----NKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAGEMYRGGFELGTVAYNCIL 827 P L+ L+ +AG F W T+ + H+ E + + F A+ + + N E++ P+ + R A + + + M + YG + D+ +++ LC+NG A K+ +D + P+ + L+ GWC +GKL EAK + +M G E V + +L Sbjct: 97 PGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPK-YGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLL 278 The following BLAST results are available for this feature:
BLAST of CV884765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884765 ID=CV884765; Name=CV884765; organism=Citrus sinensis; type=EST; length=849bpback to top |