CX043430
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043430 vs. ExPASy Swiss-Prot
Match: CLH1_CITUN (Chlorophyllase-1, chloroplastic OS=Citrus unshiu PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.155e-50 Identity = 115/219 (52.51%), Postives = 138/219 (63.01%), Query Frame = 1 Query: 1 SKPV-SVEAKPGLATALLSVFSSGPYSPKLKTVNKPWFNSFPP-KPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFL-PPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSHDSXEFSIPXXXXXXXXXXXXKCMQPCAPE 648 SKP SV+ P LATA L VF+ G YS K T+ +S PP KPL IV P EKGT+ VILF HGT+LSN SYS + DH+ASHG+IVVAPQLY + PP E+N AA V WL GLQ LPEN EAN++ VA+MGHSRGG AF L+L Y A++G+DPVAG S + L+P ILS DS +FSIP +C+ CAPE Sbjct: 7 SKPAASVQGTPLLATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAEKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--------FGAVIGLDPVAG-TSKTTGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPE 216
BLAST of CX043430 vs. ExPASy Swiss-Prot
Match: CLH1_CITSI (Chlorophyllase-1, chloroplastic OS=Citrus sinensis GN=CHLASE1 PE=1 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.111e-49 Identity = 113/219 (51.60%), Postives = 137/219 (62.56%), Query Frame = 1 Query: 1 SKPV-SVEAKPGLATALLSVFSSGPYSPKLKTVNKPWFNSFPP-KPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFL-PPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSHDSXEFSIPXXXXXXXXXXXXKCMQPCAPE 648 +KP SV+ P LATA L VF+ G YS K T+ +S PP KPL IV P KGT+ VILF HGT+LSN SYS + DH+ASHG+IVVAPQLY + PP E+N AA V WL GLQ LPEN EAN++ VA+MGHSRGG AF L+L Y A++G+DPVAG S + L+P ILS DS +FSIP +C+ CAPE Sbjct: 7 AKPAASVQGTPLLATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--------FGAVIGLDPVAG-TSKTTGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPE 216
BLAST of CX043430 vs. ExPASy Swiss-Prot
Match: CLH1_ARATH (Chlorophyllase-1 OS=Arabidopsis thaliana GN=CLH1 PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.235e-39 Identity = 88/178 (49.44%), Postives = 112/178 (62.92%), Query Frame = 1 Query: 121 PPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSXEFSIP-XXXXXXXXXXXXKCMQPCAP 645 PPKP+ I P GTY V+LFFHG L N YS++L+H+ASHGYI+VAPQL LPP G EV+DA +V+NW S L++ LP +V AN Y +L+GHSRGG AF +ALG+A SI SAL+GIDPVAG + + +P IL++ +S E IP M PCAP Sbjct: 41 PPKPVRITCPTVAGTYPVVLFFHGFYLRNYFYSDVLNHIASHGYILVAPQLCKLLPPGGQVEVDDAGSVINWASENLKAHLPTSVNANGKYTSLVGHSRGGKTAFAVALGHAATLDPSITFSALIGIDPVAG-TNKYIRTDPHILTYKPESFELDIPVAVVGTGLGPKWNNVMPPCAP 217
BLAST of CX043430 vs. ExPASy Swiss-Prot
Match: CLH0_CHEAL (Chlorophyllase type 0 OS=Chenopodium album GN=CACLH PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.518e-30 Identity = 75/185 (40.54%), Postives = 107/185 (57.84%), Query Frame = 1 Query: 46 LLSVFSSGPYSPKLKTVNKPWFNSFPPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPK---GNGEVNDAANVLNWLSTGLQSELPE---NVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSHDSXEFSI 582 + VF G + + + P+PL I+ P+E G Y V+LF HGT LSN YS +++ASHG+IVVAP+L+ PPK E++ AA+V NW+ LQ L VE +L +A+ GHSRGG AF LALG+ +N + + SAL+G+DPVAG SV P +L++ F++ Sbjct: 34 ITDVFHKGNFQVTNNPIRVKRYEFSAPEPLIIISPKEAGVYPVLLFIHGTMLSNEDYSLFFNYIASHGFIVVAPKLFRLFPPKLPSQQDEIDMAASVANWMPLYLQVVLQRYVTGVEGDLEKLAISGHSRGGKSAFALALGF-SNIKLDVTFSALIGVDPVAG-RSVDDRTLPHVLTYKPNSFNL 216
BLAST of CX043430 vs. ExPASy Swiss-Prot
Match: CLH2_ARATH (Chlorophyllase-2, chloroplastic OS=Arabidopsis thaliana GN=CLH2 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.097e-29 Identity = 68/157 (43.31%), Postives = 94/157 (59.87%), Query Frame = 1 Query: 121 PPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLAL---GYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSHDSXEFSI 582 PPK L + P E+G Y V++ HG L N+ YS L+ H++SHG+I++APQLY P E+ A +++WLS GL LP V NL+ AL GHSRGG AF +AL GY++N +KIS L+GIDPV G + PP+L++ F + Sbjct: 41 PPKQLLVATPVEEGDYPVVMLLHGYLLYNSFYSQLMLHVSSHGFILIAPQLYSIAGPDTMDEIKSTAEIMDWLSVGLNHFLPAQVTPNLSKFALSGHSRGGKTAFAVALKKFGYSSN----LKISTLIGIDPVDGTGK-GKQTPPPVLAYLPNSFDL 192 The following BLAST results are available for this feature:
BLAST of CX043430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043430 ID=CX043430; Name=CX043430; organism=Citrus sinensis; type=EST; length=656bpback to top |