CV884736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884736 vs. ExPASy Swiss-Prot
Match: SLU7A_ARATH (Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana GN=At1g65660 PE=1 SV=2) HSP 1 Score: 298.13 bits (762), Expect = 1.812e-80 Identity = 134/154 (87.01%), Postives = 148/154 (96.10%), Query Frame = 3 Query: 3 QIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSEKPSLKHQRKWKSDPNYTKSWYDRGAKVFHAEKYRKGACANCGAMTHDAKSCMERPRKMGAKWTNINIAPDEKIETFELDYDGKRDRWNGYDTSSYARVVERYEARDDARRKF 464 QIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSEKPSLKHQRKWKSDPNYTKSWYDRGAK+F AEKYRKGAC NCGAMTH AK+CM+RPRK+GAK+TN+NIAPDEKIE+FELDYDGKRDRWNGYD S+Y RV++ YEA++DAR+K+ Sbjct: 17 QIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSEKPSLKHQRKWKSDPNYTKSWYDRGAKIFQAEKYRKGACQNCGAMTHTAKACMDRPRKIGAKYTNMNIAPDEKIESFELDYDGKRDRWNGYDPSTYHRVIDLYEAKEDARKKY 170
BLAST of CV884736 vs. ExPASy Swiss-Prot
Match: SLU7_ORYSJ (Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp. japonica GN=Os08g0127700 PE=2 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 1.534e-79 Identity = 131/154 (85.06%), Postives = 144/154 (93.51%), Query Frame = 3 Query: 3 QIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSEKPSLKHQRKWKSDPNYTKSWYDRGAKVFHAEKYRKGACANCGAMTHDAKSCMERPRKMGAKWTNINIAPDEKIETFELDYDGKRDRWNGYDTSSYARVVERYEARDDARRKF 464 Q+ELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLN++KPSLKHQR WKSDPNYTKSWYDRGAK+F A KYRKGAC NCGAMTHD KSCMERPR +GAKWTNINIAPDEK+E+FELDYDGKRDRWNGYD S+Y RV+ YEAR++AR+K+ Sbjct: 17 QLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNADKPSLKHQRNWKSDPNYTKSWYDRGAKLFQANKYRKGACENCGAMTHDKKSCMERPRSVGAKWTNINIAPDEKVESFELDYDGKRDRWNGYDPSTYTRVIADYEAREEARKKY 170
BLAST of CV884736 vs. ExPASy Swiss-Prot
Match: SLU7_ORYSI (Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp. indica GN=OsI_27673 PE=3 SV=2) HSP 1 Score: 295.049 bits (754), Expect = 1.534e-79 Identity = 131/154 (85.06%), Postives = 144/154 (93.51%), Query Frame = 3 Query: 3 QIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSEKPSLKHQRKWKSDPNYTKSWYDRGAKVFHAEKYRKGACANCGAMTHDAKSCMERPRKMGAKWTNINIAPDEKIETFELDYDGKRDRWNGYDTSSYARVVERYEARDDARRKF 464 Q+ELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLN++KPSLKHQR WKSDPNYTKSWYDRGAK+F A KYRKGAC NCGAMTHD KSCMERPR +GAKWTNINIAPDEK+E+FELDYDGKRDRWNGYD S+Y RV+ YEAR++AR+K+ Sbjct: 17 QLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNADKPSLKHQRNWKSDPNYTKSWYDRGAKLFQANKYRKGACENCGAMTHDKKSCMERPRSVGAKWTNINIAPDEKVESFELDYDGKRDRWNGYDPSTYTRVIADYEAREEARKKY 170
BLAST of CV884736 vs. ExPASy Swiss-Prot
Match: SLU7B_ARATH (Pre-mRNA-splicing factor SLU7-B OS=Arabidopsis thaliana GN=At4g37120 PE=2 SV=3) HSP 1 Score: 264.233 bits (674), Expect = 2.900e-70 Identity = 115/154 (74.68%), Postives = 139/154 (90.26%), Query Frame = 3 Query: 3 QIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSEKPSLKHQRKWKSDPNYTKSWYDRGAKVFHAEKYRKGACANCGAMTHDAKSCMERPRKMGAKWTNINIAPDEKIETFELDYDGKRDRWNGYDTSSYARVVERYEARDDARRKF 464 ++ELEEARKAGLAPAEVDEDGKEINPHIP+YMS APWYL SE+PSLKHQ+ WK +P K WYDRG K++ AE+YRKGAC NCGAMTH +K+CM+RPRK+GAK+TN+NIA DEKIE+FELDYDGKRDRWNGYDTS+Y VV+RY+A+++AR+K+ Sbjct: 17 KLELEEARKAGLAPAEVDEDGKEINPHIPEYMSKAPWYLKSEQPSLKHQKNWKIEPEPKKIWYDRGKKIYQAEQYRKGACINCGAMTHSSKACMDRPRKIGAKYTNMNIAADEKIESFELDYDGKRDRWNGYDTSTYRHVVDRYDAKEEARKKY 170
BLAST of CV884736 vs. ExPASy Swiss-Prot
Match: SLU7_CRYNE (Pre-mRNA-splicing factor SLU7 OS=Cryptococcus neoformans GN=SLU7 PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.146e-50 Identity = 95/156 (60.90%), Postives = 115/156 (73.72%), Query Frame = 3 Query: 3 QIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSEKPSLKHQRKWKSDPNYT-KSWYDRGAKVFHA-EKYRKGACANCGAMTHDAKSCMERPRKMGAKWTNINIAPDEKIETFELDYDGKRDRWNGYDTSSYARVVERYEARDDARRKF 464 Q +LE ARKAG APA +DE G INPHIP+Y++ APWY ++ +PSL HQR + P+ WYDRGAK A +KYRKGAC NCGAMTH K C+ERPRK GAK+TN +IAPDE ++ FE DYD KRDRWNGYD +SY VVE YEA + R+K+ Sbjct: 21 QKDLEAARKAGTAPAALDEQGNAINPHIPEYITKAPWYADTGRPSLAHQRINEQGPHLKLDEWYDRGAKAGPAAKKYRKGACENCGAMTHKMKDCVERPRKRGAKFTNKDIAPDELVQQFEGDYDAKRDRWNGYDPASYKHVVEEYEATEQMRKKY 176
BLAST of CV884736 vs. ExPASy Swiss-Prot
Match: SLU7_DICDI (Pre-mRNA-splicing factor slu7 OS=Dictyostelium discoideum GN=slu7 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 9.699e-50 Identity = 96/152 (63.16%), Postives = 112/152 (73.68%), Query Frame = 3 Query: 9 ELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSEKPSLKHQRKWKSDPNYTKSWYDRGAKVFHAE-KYRKGACANCGAMTHDAKSCMERPRKMGAKWTNINIAPDEKIETFELDYDGKRDRWNGYDTSSYARVVERYEARDDARRK 461 EL+EARKAG APAE+DE+GKEINPHIP+Y+ APWYLN+ KPSLKHQR + K WY RGA A K+RKGAC NCGAMTH K C ERPRK+GAK+TN +I PDE I+ ELDYD KRD +NGYD SSY V++ YE D R+K Sbjct: 19 ELDEARKAGNAPAELDEEGKEINPHIPEYILKAPWYLNANKPSLKHQRG-VTKKEMDKGWYLRGATTGEAATKFRKGACENCGAMTHKTKDCCERPRKLGAKFTNDDIKPDEVIQKLELDYDSKRDPYNGYDPSSYKEVMDIYEKADTERKK 169
BLAST of CV884736 vs. ExPASy Swiss-Prot
Match: SLU7_CHICK (Pre-mRNA-splicing factor SLU7 OS=Gallus gallus GN=SLU7 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.004e-46 Identity = 92/156 (58.97%), Postives = 114/156 (73.08%), Query Frame = 3 Query: 9 ELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLN-SEKPSLKHQRKW-KSDPNYTKS--WYDRGAKVFH-AEKYRKGACANCGAMTHDAKSCMERPRKMGAKWTNINIAPDEKIE-TFELDYDGKRDRWNGYDTSSYARVVERYEARDDARR 458 ELEE RK G APAEVDE+GK+INPHIPQY+SS PWY++ S++P+LKHQR + Y+ S WY RG K A +YRKGAC NCGA+TH K CMERPRK+GAK+T +NIAPDE ++ DYDGKRDRWNGY+ + ++VE Y D A+R Sbjct: 36 ELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVPWYIDPSKRPTLKHQRPQPEKQKQYSSSGDWYKRGVKEHSIATRYRKGACENCGALTHKKKDCMERPRKVGAKYTGMNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYAKVDLAKR 191
BLAST of CV884736 vs. ExPASy Swiss-Prot
Match: SLU7_BOVIN (Pre-mRNA-splicing factor SLU7 OS=Bos taurus GN=SLU7 PE=2 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 1.893e-45 Identity = 91/156 (58.33%), Postives = 111/156 (71.15%), Query Frame = 3 Query: 9 ELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLN-SEKPSLKHQRKW-KSDPNYTKS--WYDRGAKVFH-AEKYRKGACANCGAMTHDAKSCMERPRKMGAKWTNINIAPDEKIE-TFELDYDGKRDRWNGYDTSSYARVVERYEARDDARR 458 ELEE RK G APAEVDE+GK+INPHIPQY+SS PWY++ S++P+LKHQR + Y+ S WY RG K KYRKGAC NCGAMTH K C ERPR++GAK+T NIAPDE ++ DYDGKRDRWNGY+ + ++VE Y D A+R Sbjct: 38 ELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVPWYIDPSKRPTLKHQRPQPEKQKQYSSSGEWYKRGVKENSITTKYRKGACENCGAMTHKKKDCFERPRRVGAKFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYAKVDLAKR 193
BLAST of CV884736 vs. ExPASy Swiss-Prot
Match: SLU7_RAT (Pre-mRNA-splicing factor SLU7 OS=Rattus norvegicus GN=Slu7 PE=2 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 3.229e-45 Identity = 91/156 (58.33%), Postives = 108/156 (69.23%), Query Frame = 3 Query: 9 ELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLN-SEKPSLKHQRKWKSDPNYTKS---WYDRGAKVFH-AEKYRKGACANCGAMTHDAKSCMERPRKMGAKWTNINIAPDEKIE-TFELDYDGKRDRWNGYDTSSYARVVERYEARDDARR 458 ELEE RK G APAEVDE+GK+INPHIPQY+SS PWY++ S++P+LKHQR S WY RG K KYRKGAC NCGAMTH K C ERPR++GAK+T NIAPDE I+ DYDGKRDRWNGY+ + ++VE Y D A+R Sbjct: 38 ELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWYKRGVKENSITTKYRKGACENCGAMTHKRKDCFERPRRVGAKFTGTNIAPDEHIQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYAKVDLAKR 193
BLAST of CV884736 vs. ExPASy Swiss-Prot
Match: SLU7_MOUSE (Pre-mRNA-splicing factor SLU7 OS=Mus musculus GN=Slu7 PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 4.217e-45 Identity = 90/156 (57.69%), Postives = 108/156 (69.23%), Query Frame = 3 Query: 9 ELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLN-SEKPSLKHQRKWKSDPNYTKS---WYDRGAKVFH-AEKYRKGACANCGAMTHDAKSCMERPRKMGAKWTNINIAPDEKIE-TFELDYDGKRDRWNGYDTSSYARVVERYEARDDARR 458 ELEE RK G APAEVDE+GK+INPHIPQY+SS PWY++ S++P+LKHQR S WY RG K KYRKGAC NCGAMTH K C ERPR++GAK+T NIAPDE ++ DYDGKRDRWNGY+ + ++VE Y D A+R Sbjct: 38 ELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWYKRGVKENSITTKYRKGACENCGAMTHKRKDCFERPRRVGAKFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYAKVDLAKR 193 The following BLAST results are available for this feature:
BLAST of CV884736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884736 ID=CV884736; Name=CV884736; organism=Citrus sinensis; type=EST; length=551bpback to top |