CV884728

Overview
NameCV884728
Unique NameCV884728
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9906 contig Csv1_Contig9906:557..1399. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.184e-70
Identity = 123/243 (50.62%), Postives = 169/243 (69.55%), Query Frame = 3
Query:    6 GVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFKGINFECNVCNSYVMEFYK 734
            GVS+ P   ++ DKV++  W+ LKD +LEG + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T +VDV            SKYP IKGINFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY ALP++GKV++    LP  PDS+ A++    +D I L   P G+ERT +EF ALA  AGF+G N  C+  N+YV+EF K
Sbjct:  121 GVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.849e-69
Identity = 121/244 (49.59%), Postives = 169/244 (69.26%), Query Frame = 3
Query:    3 NGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFKGINFECNVCNSYVMEFYK 734
            +GVS+     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + K+ ++Y+GFQ +T LVDV            SKYP I+ INFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K+L+NCY ALPN+GKV++    LPEVPDS+ A++    +D I +   P G+ERT KEF ALA  AGF+G    CN  N+Y++EF K
Sbjct:   96 DGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.849e-69
Identity = 121/244 (49.59%), Postives = 169/244 (69.26%), Query Frame = 3
Query:    3 NGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFKGINFECNVCNSYVMEFYK 734
            +GVS+     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + K+ ++Y+GFQ +T LVDV            SKYP I+ INFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K+L+NCY ALPN+GKV++    LPEVPDS+ A++    +D I +   P G+ERT KEF ALA  AGF+G    CN  N+Y++EF K
Sbjct:   96 DGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 3.153e-69
Identity = 121/244 (49.59%), Postives = 169/244 (69.26%), Query Frame = 3
Query:    3 NGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFKGINFECNVCNSYVMEFYK 734
            +GVS+     ++ DKV+M  W+ LKD IL+G + +NKA GM  ++Y GTD RFN+VFNNGM   ++  + KI+E+YKGF+ +T LVDV            SKYP++KGINFD+PHVI+DA S+PG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY++LP DGKV++    LPE PDS+ +++    +D I L   P G+ERT KEF ALA  +GFKGI   C+     ++E  K
Sbjct:  118 DGVSIAALCLMNQDKVLMESWYHLKDAILDGGIPFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNLKGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNPGGKERTEKEFEALAKASGFKGIKVVCDAFGVNLIELLK 361          
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 4.118e-69
Identity = 125/244 (51.23%), Postives = 163/244 (66.80%), Query Frame = 3
Query:    3 NGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFKGINFECNVCNSYVMEFYK 734
            +GVS+ P   ++ DKV+M  W+ LKD IL+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI E Y GF+ +  +VDV            +KYP IKGINFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY ALP  GKV+V    LP  PD + A++    +DAI L   P G+ERT KEF ALAI AGFKG    C   N+YVMEF K
Sbjct:  125 DGVSLAPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTIVDVGGGTGAVLSMIVAKYPSIKGINFDLPHVIEDAPIYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368          
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.379e-69
Identity = 122/244 (50.00%), Postives = 166/244 (68.03%), Query Frame = 3
Query:    3 NGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFKGINFECNVCNSYVMEFYK 734
            +GVS+     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+Y GF+ +  LVDV            SKYP IKGINFD+PHVI+DA SYPG+EHVGGDM+  IP+ DA+ MKW+ H++ DE+C+K L+NCY+ALP++GKV+V    LP  PDS+ A++    +D I L   P G+ERT KEF  LA  AGF+G    CN  N+Y+MEF K
Sbjct:  120 DGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 7.025e-69
Identity = 119/244 (48.77%), Postives = 169/244 (69.26%), Query Frame = 3
Query:    3 NGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFKGINFECNVCNSYVMEFYK 734
            +GVS+     ++ DKV++  W+ LKD +L+G + +NKA GM  +DY GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T +VDV            SKYP IKGINFD+PHVI+DA  YPG++HVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY ALP++GKV++    LP  PD++ A++    +D + L   P G+ERT +EF ALA  +GF+GI   CN  N+YV+EF K
Sbjct:  120 DGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINFDLPHVIEDAPQYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.565e-68
Identity = 120/243 (49.38%), Postives = 167/243 (68.72%), Query Frame = 3
Query:    6 GVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFKGINFECNVCNSYVMEFYK 734
            GVS+ P + ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y G D RFN+VFN+GM   ++  + KIVE Y GF  +  LVDV            SK+  +KGINFD+PHVI DA++Y G+EHVGGDM++ +P+GDAI MKW+LH++ D +C+++L+NCYK+LP +GKV+V    LPE PD+T A+++   +D I L   P G+ERT KEF ALA  AGFKG N      N++VMEF K
Sbjct:  112 GVSLAPLLLMNQDKVLMESWYYLKDPVLDGGIPFNKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVELYNGFSGLKTLVDVGGGTGASLNMITSKHKSLKGINFDLPHVIADATTYQGIEHVGGDMFESVPKGDAIFMKWILHDWSDAHCLQVLKNCYKSLPENGKVIVAECILPEAPDTTPATQNVIHIDVIMLAHNPGGKERTEKEFEALAKGAGFKGFNKAACALNTWVMEFCK 354          
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.486e-68
Identity = 121/244 (49.59%), Postives = 165/244 (67.62%), Query Frame = 3
Query:    3 NGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFKGINFECNVCNSYVMEFYK 734
            +GVS+ P   ++ DKV+M  W+ LKD ILEG + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T LVDV            SKYP IKGINFD+PHVI+DA SYPG+EHVGGDM+  +P  DA+ MKW+ H++ D +C+K L+NCY ALP +GKV+++   LP  PD++ A++    +D I L   P G+ERT KEF  LA  AGF+G    C   N++V+EF K
Sbjct:  120 DGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPNADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLANGAGFQGFEVMCCAFNTHVIEFRK 363          
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.947e-68
Identity = 120/244 (49.18%), Postives = 166/244 (68.03%), Query Frame = 3
Query:    3 NGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFKGINFECNVCNSYVMEFYK 734
            +GVS+ P   ++ DKV+M  W+ LKD IL+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T LVDV            SKYP IKGINFD+PHVI+DA SYPG+EHVGGDM+  +P+ DA+ MKW+ H++ D +C+K L+NCY ALP +GKV+++   LP  PD++ A++    +D I L   P G+ERT KEF  LA  AGF+G    C   N++V+EF K
Sbjct:  120 DGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLAKGAGFQGFEVMCCAFNTHVIEFRK 363          
The following BLAST results are available for this feature:
BLAST of CV884728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
COMT1_PRUDU2.184e-7050.62Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
OMT2_CHRAE1.849e-6949.59Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE1.849e-6949.59Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
OMT1_ARATH3.153e-6949.59Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_CLABR4.118e-6951.23Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_MEDSA5.379e-6950.00Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_ROSCH7.025e-6948.77Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_ZINEL1.565e-6849.38Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_POPKI3.486e-6849.59Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_POPTM5.947e-6849.18Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010C02_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T3_C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884728 ID=CV884728; Name=CV884728; organism=Citrus sinensis; type=EST; length=843bp
AAAACGGCGTCTCAATGCGTCCCTATATGAACTTGTCTCTTGACAAAGTA
ATGATGCCTGGCTGGTTCCAATTGAAAGACCAAATTCTTGAAGGAGAACT
TTCGTATAATAAAGCCCTCGGAATGGATTTCTACGATTATCTGGGCACCG
ACTCCAGGTTCAATGAAGTTTTCAACAATGGAATGATCGGCCAGACTTCT
TTTGTAATCAATAAGATTGTAGAATCCTACAAAGGCTTTCAGAATATTAC
GCGCCTTGTTGACGTTGGCGGTGGTTTAGGAATCACCCTTGCGACCATAA
TTTCCAAATACCCTCATATTAAGGGTATTAATTTTGACGTACCTCATGTT
ATAAAAGATGCCTCATCTTATCCCGGCATGGAACATGTTGGCGGAGATAT
GTACCAAAAAATTCCAGAGGGGGATGCCATTTTAATGAAGTGGATGCTTC
ATAATTTTGATGATGAGAATTGCATAAAGATACTGAGGAATTGTTACAAA
GCTCTTCCAAATGATGGAAAGGTACTTGTTATTAACTCAACGTTGCCAGA
AGTGCCTGACAGTACCGAGGCTTCAAGGGATTCCTTCATTTTAGATGCAA
TTTTTTTAATCCAAATTCCTCATGGAAGGGAGCGGACCANAAAGGAGTTC
ACTGCATTGGCAATCGAAGCTGGATTTAAGGGTATCAACTTTGAATGTAA
CGTTTGCAATTCCTATGTCATGGAATTCTACAAGTAACTTTGAAGCTAGA
TTGCTTCATTCTTTCTTTATCAGAAAGATGCATCTTCTCAATTTTAATTT
GGAGTGTCGATACTCCATTTTCTTTTCTGTAACTTTCTGTTTT
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