CV884720

Overview
NameCV884720
Unique NameCV884720
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12928 contig Csv1_Contig12928:1243..2090. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884720 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.072e-32
Identity = 97/229 (42.36%), Postives = 126/229 (55.02%), Query Frame = 3
Query:   18 FALISGTSMAAPHIAGIAALVKQKHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGNGHVNPRAALDPGLIFDAGYVDYLGFLC----TTPGIDIHEIRNYTNQPC-NYSMGHPYNFNTPSITV-AHLVKTQVVTRTVTNVAEEETYSMSARMQ-PAIAIEVNPPAMTLKPGASRK-FTVTLTVRS--VTGTYSFGEICMKGSRGHKVNIPV 674
            F +ISGTSM+ PH++G+AAL+K  HP WSPAAI+SALMTT  K  +  +PL        +      +TPFD+G GHV+P  A +PGLI+D    DYLGFLC    T+P I     RNYT  P  +YS+    + N PS  V    V     TRTVT+V    TYS+    +   + I V P  +  K    +K +TVT TV S   +G+ SFG I     + H V  PV
Sbjct:  535 FNIISGTSMSCPHVSGLAALLKSVHPEWSPAAIRSALMTTAYKTYKDGKPL-------LDIATGKPSTPFDHGAGHVSPTTATNPGLIYDLTTEDYLGFLCALNYTSPQIRSVSRRNYTCDPSKSYSVA---DLNYPSFAVNVDGVGAYKYTRTVTSVGGAGTYSVKVTSETTGVKISVEPAVLNFKEANEKKSYTVTFTVDSSKPSGSNSFGSIEWSDGK-HVVGSPV 752          
BLAST of CV884720 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.967e-24
Identity = 78/201 (38.81%), Postives = 105/201 (52.24%), Query Frame = 3
Query:   18 FALISGTSMAAPHIAGIAALVKQKHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGNGHVNPRAALDPGLIFDAGYVDYLGFLCTTPGIDIHEIRNYTN--QPC-NYSMGHPYNFNTPSITVA---HLVKTQVVTRTVTNVA-EEETYSMSARMQPAIAIEVNPPAMTLKPGASRKFTVTLTVR 599
            F +ISGTSM+ PHI GIA  VK  +P WSPAAIKSALMTT + ++    P QA+               F YG+GHVNP  A+ PGL++DA   DY+ FLC   G +   +R  T     C + + G  ++ N PS  ++        Q   RT+T+VA +  TY         + I VNP  ++      RK + TLTVR
Sbjct:  518 FNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARFNP-QAE---------------FAYGSGHVNPLKAVRPGLVYDANESDYVKFLC-GQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRK-SFTLTVR 700          
BLAST of CV884720 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.927e-22
Identity = 75/231 (32.47%), Postives = 112/231 (48.48%), Query Frame = 3
Query:   18 FALISGTSMAAPHIAGIAALVKQKHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGNGHVNPRAALDPGLIFDAGYVDYLGFLC-----TTPGIDIHEIRNYTNQPCNYSMGH-PYNFNTPSITV--AHLVKTQVVTRTVTNVA-EEETYSMSARMQPAIAIEVNPPAMTL-KPGASRKFTVTLTVRSVT-GTYSFGEICMKGSRGHKVNIPVI 677
            F ++SGTSMA PH+AG+AA VK  HP W+PAAIKSA++T       +++P+  +   + E         F YG G +NPR A  PGL++D   + Y+ FLC      T    +   R+ +       +GH   N+ T  +T+  A      V  R VTNV      Y+ + R    + I V P +++  K    R F V +  + +T G    G +  K  R H V  P++
Sbjct:  529 FTILSGTSMACPHVAGVAAYVKSFHPDWTPAAIKSAIIT-------SAKPISRRVNKDAE---------FAYGGGQINPRRAASPGLVYDMDDISYVQFLCGEGYNATTLAPLVGTRSVSCSSIVPGLGHDSLNYPTIQLTLRSAKTSTLAVFRRRVTNVGPPSSVYTATVRAPKGVEITVEPQSLSFSKASQKRSFKVVVKAKQMTPGKIVSGLLVWKSPR-HSVRSPIV 742          
The following BLAST results are available for this feature:
BLAST of CV884720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SUBL_ARATH1.072e-3242.36Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
CUCM1_CUCME6.967e-2438.81Cucumisin OS=Cucumis melo PE=1 SV=1[more]
XSP1_ARATH2.927e-2232.47Xylem serine proteinase 1 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010B10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T3_B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884720 ID=CV884720; Name=CV884720; organism=Citrus sinensis; type=EST; length=849bp
ATTTTGTGGGAGAAGGATTTGCCTTGATATCTGGAACCAGTATGGCTGCA
CCACATATAGCCGGGATAGCTGCTCTTGTGAAGCAGAAGCACCCTTATTG
GAGCCCAGCTGCTATAAAATCAGCATTGATGACCACAACAACGAAGTTGG
ACAGAGCAAGTAGGCCTCTTCAAGCACAACAATATTCTGAAACAGAAGCC
ATGAAGCTGGTTACAGCTACACCATTTGACTATGGGAATGGCCATGTCAA
TCCAAGAGCTGCCTTGGATCCTGGACTCATATTTGATGCAGGTTACGTGG
ATTACTTGGGATTCTTGTGCACGACTCCCGGCATAGACATTCACGAGATA
AGAAACTACACAAACCAACCCTGCAACTACTCAATGGGCCACCCGTATAA
TTTCAATACTCCGTCAATCACAGTCGCCCATCTTGTGAAGACTCAAGTAG
TTACACGAACAGTCACAAATGTTGCCGAAGAAGAAACCTACTCGATGTCC
GCCAGGATGCAACCAGCCATTGCCATTGAAGTCAACCCTCCAGCCATGAC
TCTGAAACCTGGTGCTTCACGGAAGTTCACTGTGACCCTCACTGTGAGAT
CGGTGACCGGCACGTACAGTTTTGGGGAAATTTGCATGAAAGGAAGTCGA
GGGCACAAGGTAAATATCCCGGTGATAGCTCAGGGAAATTGGCGATGAAT
TGACTGATGAGATGCGTTGGGGTCAATGTTAGTTAAGTTGTATCGTTGTA
ATATTCTTTTGTAATCTGTGGTAATAAGATAGCTATAAGGCCAAATATAT
ATGGTCTCAAATATATATGTGGAGTAGTTGTAAAGATAACAAGTACAAG
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