CV884716
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884716 vs. ExPASy Swiss-Prot
Match: MSI4_ARATH (WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana GN=MSI4 PE=1 SV=3) HSP 1 Score: 360.918 bits (925), Expect = 5.261e-99 Identity = 172/220 (78.18%), Postives = 186/220 (84.55%), Query Frame = -2 Query: 210 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWXXXXXXXXXXXXXXXXTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSKP 869 HEDTVEDV F P+SAQEFCSVGDDSCLILWDAR GT+PV KVEKAHDADLHCVDWNP DDNLILTGSADN+VR+FDRR LT+NGVGSPI KFEGH AAVLCVQWSPDKSSVFGSSAEDGLLNIWDY++V KK + R PAGLFFQHAGHRDKVVDFHWNASDPW TLQIWRMSDLIYRP++EV+AELEKFK+HV++C SKP Sbjct: 291 HEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKSD---RAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCETTGGGGTLQIWRMSDLIYRPEEEVVAELEKFKSHVMTCASKP 507
BLAST of CV884716 vs. ExPASy Swiss-Prot
Match: MSI5_ARATH (WD-40 repeat-containing protein MSI5 OS=Arabidopsis thaliana GN=MSI5 PE=2 SV=2) HSP 1 Score: 355.525 bits (911), Expect = 2.211e-97 Identity = 170/219 (77.63%), Postives = 184/219 (84.02%), Query Frame = -2 Query: 213 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWXXXXXXXXXXXXXXXXTLQIWRMSDLIYRPQDEVLAELEKFKAHVISCTSK 869 H+DTVEDV FCPSSAQEFCSVGDDSCL+LWDAR GTSP +KVEKAHDADLHCVDWNP D+NLILTGSADN+VR+FDRRNLTSNGVGSP+ KFEGH AAVLCVQWSPDKSSVFGSSAEDGLLNIWD ++VGKK E R T P GLFFQHAGHRDKVVDFHW+ +PW TLQIWRMSDLIYRP+DEVL ELEKFK+HV +CTSK Sbjct: 271 HKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKKSE---RATKTPDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVSDNCESIGGGGTLQIWRMSDLIYRPEDEVLTELEKFKSHVFTCTSK 486
BLAST of CV884716 vs. ExPASy Swiss-Prot
Match: RBBD_DICDI (Probable histone-binding protein rbbD OS=Dictyostelium discoideum GN=rbbD PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.191e-30 Identity = 72/213 (33.80%), Postives = 112/213 (52.58%), Query Frame = -2 Query: 231 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWXXXXXXXXXXXXXXXXTLQIWRMSDLIYRPQDEVLAELEKFKAHV 869 H VEDV + F SVGDD L++WD R GT P+ VE AH+++++C+ +NP + L+ TGS D +V ++D RNL G+ ++ H+ V VQ+SP +V S D +N+WD ++G++ + + P L F H GH K+ DF WN +DPW LQIW+M++ IY +++ L + A + Sbjct: 223 HTSIVEDVAWHYIHDTFFGSVGDDKKLMIWDTRTGTKPIHVVE-AHNSEVNCLSFNPFCEFLVATGSTDKTVALWDMRNL-----GNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLSRIGEE-QNNEDAADGPPELLFIHGGHTSKISDFSWNPNDPW-------SIASVAEDNILQIWQMAENIYNDREDDLENSKVTNAQI 421
BLAST of CV884716 vs. ExPASy Swiss-Prot
Match: LIN53_CAEEL (Probable histone-binding protein lin-53 OS=Caenorhabditis elegans GN=lin-53 PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.510e-29 Identity = 72/201 (35.82%), Postives = 105/201 (52.24%), Query Frame = -2 Query: 267 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHRDKVVDFHWNASDPWXXXXXXXXXXXXXXXXTLQIWRMSDLIYRPQDE 869 HE VEDV + F SVGDD L++WD R T P ++ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWSP ++ SS D L++WD K+G+ + + P L F H GH K+ DF WN ++PW LQ+W+M+D IY DE Sbjct: 221 HESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTST-PGHCID-AHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMK-----LHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGED-QSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW-------VVCSVSEDNILQVWQMADNIYNEVDE 406
BLAST of CV884716 vs. ExPASy Swiss-Prot
Match: RBBP4_DANRE (Histone-binding protein RBBP4 OS=Danio rerio GN=rbbp4 PE=2 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 7.496e-29 Identity = 71/202 (35.15%), Postives = 104/202 (51.49%), Query Frame = -2 Query: 270 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR-TTNYPAGLFFQHAGHRDKVVDFHWNASDPWXXXXXXXXXXXXXXXXTLQIWRMSDLIYRPQD 869 H VEDV++ F SV DD L++WD R TS AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWSP ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN ++PW +Q+W+M++ IY +D Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW-------VICSVSEDNIMQVWQMAENIYNDED 413
BLAST of CV884716 vs. ExPASy Swiss-Prot
Match: RBP4B_XENLA (Histone-binding protein RBBP4-B OS=Xenopus laevis GN=rbbp4-B PE=1 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 1.279e-28 Identity = 71/202 (35.15%), Postives = 104/202 (51.49%), Query Frame = -2 Query: 270 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR-TTNYPAGLFFQHAGHRDKVVDFHWNASDPWXXXXXXXXXXXXXXXXTLQIWRMSDLIYRPQD 869 H VEDV++ F SV DD L++WD R TS AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWSP ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN ++PW +Q+W+M++ IY +D Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW-------VICSVSEDNIMQVWQMAENIYNDED 413
BLAST of CV884716 vs. ExPASy Swiss-Prot
Match: RBP4A_XENLA (Histone-binding protein RBBP4-A OS=Xenopus laevis GN=rbbp4-A PE=1 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 1.279e-28 Identity = 71/202 (35.15%), Postives = 104/202 (51.49%), Query Frame = -2 Query: 270 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR-TTNYPAGLFFQHAGHRDKVVDFHWNASDPWXXXXXXXXXXXXXXXXTLQIWRMSDLIYRPQD 869 H VEDV++ F SV DD L++WD R TS AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWSP ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN ++PW +Q+W+M++ IY +D Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW-------VICSVSEDNIMQVWQMAENIYNDED 413
BLAST of CV884716 vs. ExPASy Swiss-Prot
Match: RBBP4_XENTR (Histone-binding protein RBBP4 OS=Xenopus tropicalis GN=rbbp4 PE=2 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 1.279e-28 Identity = 71/202 (35.15%), Postives = 104/202 (51.49%), Query Frame = -2 Query: 270 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR-TTNYPAGLFFQHAGHRDKVVDFHWNASDPWXXXXXXXXXXXXXXXXTLQIWRMSDLIYRPQD 869 H VEDV++ F SV DD L++WD R TS AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWSP ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN ++PW +Q+W+M++ IY +D Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW-------VICSVSEDNIMQVWQMAENIYNDED 413
BLAST of CV884716 vs. ExPASy Swiss-Prot
Match: RBBP4_PONAB (Histone-binding protein RBBP4 OS=Pongo abelii GN=RBBP4 PE=2 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 1.279e-28 Identity = 71/202 (35.15%), Postives = 104/202 (51.49%), Query Frame = -2 Query: 270 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR-TTNYPAGLFFQHAGHRDKVVDFHWNASDPWXXXXXXXXXXXXXXXXTLQIWRMSDLIYRPQD 869 H VEDV++ F SV DD L++WD R TS AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWSP ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN ++PW +Q+W+M++ IY +D Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW-------VICSVSEDNIMQVWQMAENIYNDED 413
BLAST of CV884716 vs. ExPASy Swiss-Prot
Match: RBBP4_MOUSE (Histone-binding protein RBBP4 OS=Mus musculus GN=Rbbp4 PE=1 SV=4) HSP 1 Score: 127.102 bits (318), Expect = 1.279e-28 Identity = 71/202 (35.15%), Postives = 104/202 (51.49%), Query Frame = -2 Query: 270 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR-TTNYPAGLFFQHAGHRDKVVDFHWNASDPWXXXXXXXXXXXXXXXXTLQIWRMSDLIYRPQD 869 H VEDV++ F SV DD L++WD R TS AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWSP ++ SS D LN+WD K+G+ EQ P + P L F H GH K+ DF WN ++PW +Q+W+M++ IY +D Sbjct: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW-------VICSVSEDNIMQVWQMAENIYNDED 413 The following BLAST results are available for this feature:
BLAST of CV884716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884716 ID=CV884716; Name=CV884716; organism=Citrus sinensis; type=EST; length=870bpback to top |