CV884713
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884713 vs. ExPASy Swiss-Prot
Match: SYFB_ARATH (Probable phenylalanyl-tRNA synthetase beta chain OS=Arabidopsis thaliana GN=At1g72550 PE=2 SV=1) HSP 1 Score: 424.476 bits (1090), Expect = 3.095e-118 Identity = 205/248 (82.66%), Postives = 233/248 (93.95%), Query Frame = 1 Query: 10 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDEEVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHSAITL 753 MPT+SVGRDRLFAALG+SYT+E+FE+LCF FGIELDDVTTEKAIIRKEKH+DEE D+ DEE+IYKIE+PANR DLLCLEG+AQ+LRVF ++QEIP YTL+D+SKD +LQM+VKPETS IRP+VVCAVLR ++FDEA YNSFIDLQDKLHQNICRRR+LVAIGTHDLDTLQGPFTYEALPP+ INFVPLKQT+ F ADEL+EFYKSD+KLKK+LHIIENSP++PVLYD RTVLSLPPIINGAHSAITL Sbjct: 1 MPTISVGRDRLFAALGESYTQEKFEELCFSFGIELDDVTTEKAIIRKEKHIDEEADD-DEEIIYKIEIPANRPDLLCLEGLAQSLRVFIEKQEIPTYTLADISKDKILQMNVKPETSKIRPFVVCAVLRGVTFDEARYNSFIDLQDKLHQNICRRRSLVAIGTHDLDTLQGPFTYEALPPTDINFVPLKQTKSFRADELIEFYKSDMKLKKFLHIIENSPVFPVLYDSKRTVLSLPPIINGAHSAITL 247
BLAST of CV884713 vs. ExPASy Swiss-Prot
Match: SYFB_DROME (Probable phenylalanyl-tRNA synthetase beta chain OS=Drosophila melanogaster GN=CG5706 PE=2 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 7.693e-85 Identity = 152/248 (61.29%), Postives = 190/248 (76.61%), Query Frame = 1 Query: 10 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDEEVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHSAITL 753 MPT+ V RD LF ALGK+YT +EF+DLCF FG+ELD+VTTEK ++ KE+ EE+IY+I++PANRYDLLCLEG+ L VF + + PK+ +++K +L+ + P T+ IRPY V AVLR+++F +ASYNSFIDLQDKLHQNICR+RTLVAIGTHDLDTLQGPF+YEAL P I F PL QT++ T ELM+FY + +LK+YL II SP+YPV+YD NR VLSLPPIING HS ITL Sbjct: 1 MPTIGVKRDLLFEALGKTYTDDEFQDLCFAFGLELDEVTTEKQMLTKEQGDVAAAANASEEIIYRIDIPANRYDLLCLEGLVTGLLVFQGKLKPPKFQFVELAKRQVLK--IDPSTAQIRPYAVAAVLRNVTFTQASYNSFIDLQDKLHQNICRKRTLVAIGTHDLDTLQGPFSYEALAPDQIKFKPLNQTKEMTGSELMDFYSTHAQLKQYLPIIRESPVYPVIYDANRVVLSLPPIINGDHSKITL 246
BLAST of CV884713 vs. ExPASy Swiss-Prot
Match: SYFB_PONAB (Phenylalanyl-tRNA synthetase beta chain OS=Pongo abelii GN=FARSB PE=2 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 4.089e-78 Identity = 149/249 (59.84%), Postives = 187/249 (75.10%), Query Frame = 1 Query: 10 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDEEVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQ-MHVKPETSSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHSAITL 753 MPTVSV RD LF ALG++YT EEF++LCF FG+ELD++T+EK II KE+ + +D V+YKI+VPANRYDLLCLEG+ + L+VF ++ + P Y V D +Q + + ET+ IRP+ V AVLR+I F + Y+SFI+LQ+KLHQNICR+R LVAIGTHDLDTL GPFTY A PS I F PL +T+++TA ELM YK+D LK YLHIIEN PLYPV+YD N VLS+PPIING HS IT+ Sbjct: 1 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDV-VLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPVY--KRVMPDGKIQKLIITEETAKIRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGDHSRITV 246
BLAST of CV884713 vs. ExPASy Swiss-Prot
Match: SYFB_HUMAN (Phenylalanyl-tRNA synthetase beta chain OS=Homo sapiens GN=FARSB PE=1 SV=2) HSP 1 Score: 291.197 bits (744), Expect = 4.089e-78 Identity = 149/249 (59.84%), Postives = 187/249 (75.10%), Query Frame = 1 Query: 10 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDEEVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQ-MHVKPETSSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHSAITL 753 MPTVSV RD LF ALG++YT EEF++LCF FG+ELD++T+EK II KE+ + +D V+YKI+VPANRYDLLCLEG+ + L+VF ++ + P Y V D +Q + + ET+ IRP+ V AVLR+I F + Y+SFI+LQ+KLHQNICR+R LVAIGTHDLDTL GPFTY A PS I F PL +T+++TA ELM YK+D LK YLHIIEN PLYPV+YD N VLS+PPIING HS IT+ Sbjct: 1 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDV-VLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPVY--KRVMPDGKIQKLIITEETAKIRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGDHSRITV 246
BLAST of CV884713 vs. ExPASy Swiss-Prot
Match: SYFB_MOUSE (Phenylalanyl-tRNA synthetase beta chain OS=Mus musculus GN=Farsb PE=2 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 6.974e-78 Identity = 146/248 (58.87%), Postives = 188/248 (75.81%), Query Frame = 1 Query: 10 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDEEVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHSAITL 753 MPTVSV RD LF ALG++YT EEF++LCF FG+ELD++T+EK II KE+ + +D V+YKI+VPANRYDLLCLEG+A+ L+VF ++ + P Y + K + ++ + ET+ +RP+ V AVLR+I F + Y+SFI+LQ+KLHQNICR+R LVAIGTHDLDTL GPFTY A PS I F PL +T+++TA ELM YK+D LK YLHIIE+ PLYPV+YD N VLS+PPIING HS IT+ Sbjct: 1 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKQIISKEQGHGKAQGASDV-VLYKIDVPANRYDLLCLEGLARGLQVFKERIKAPVYKRV-MPKGDIQKLVITEETAKVRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIESKPLYPVIYDSNGVVLSMPPIINGNHSKITV 246
BLAST of CV884713 vs. ExPASy Swiss-Prot
Match: SYFB_CAEEL (Phenylalanyl-tRNA synthetase beta chain OS=Caenorhabditis elegans GN=frs-2 PE=2 SV=2) HSP 1 Score: 290.041 bits (741), Expect = 9.109e-78 Identity = 142/248 (57.26%), Postives = 186/248 (75.00%), Query Frame = 1 Query: 10 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDEEVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHSAITL 753 MPTV + + L + Y+++EF++LCF +G+ELD++T+EKA + KE+ D ND+EV YKI++PANRYDLL +EG+A+A+R+F ++ P Y +DV K + ++ VK ET+ +RP+VV AVLRDISFD SY SFIDLQDKLHQNICR+RTLVAIGTHDLDT+QGPF Y A P I F PL QT+++TA+ELM Y +D LK YL II+N P+YPV+YD+N V S+PPIING HS ITL Sbjct: 1 MPTVGIKKVILDKHFKRVYSEKEFDELCFEYGLELDEITSEKAAVEKEQGTRAASDLNDQEV-YKIDIPANRYDLLSVEGLARAIRIFKQEIPSPAYKYADVPKTGLQKIIVKKETAQVRPFVVGAVLRDISFDADSYASFIDLQDKLHQNICRKRTLVAIGTHDLDTIQGPFEYRAEAPKDIKFKPLNQTKEYTAEELMTLYSTDSHLKAYLPIIQNHPVYPVIYDKNGVVCSMPPIINGEHSKITL 247
BLAST of CV884713 vs. ExPASy Swiss-Prot
Match: SYFB_DICDI (Phenylalanyl-tRNA synthetase beta chain OS=Dictyostelium discoideum GN=pheSB PE=3 SV=2) HSP 1 Score: 279.256 bits (713), Expect = 1.608e-74 Identity = 140/252 (55.56%), Postives = 189/252 (75.00%), Query Frame = 1 Query: 10 MPTVSVGRDRLFAALG---KSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDEEVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHINFVPLKQTRDFTADELMEFY-KSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHSAITL 753 MP V++ RD L+ ALG K+YT+E+FEDLCF FG+ELD+VT+E+ + + E +++ +D VIYKI+V ANRYDLLCLEGIA+AL V+N + IPKY + K+S ++++ E S+RP +V +LRDI+F + SY+SFIDLQ+KLH NIC++R+LV+IGTHDLDTL GPF Y+AL P I FVPL QT+++ A+EL +FY +S LKK+L II++SP+YPV+YD V SLPPIING HS I L Sbjct: 1 MPKVNINRDILYKALGFYIKTYTQEQFEDLCFAFGVELDEVTSEREMKKNETGVEDLTVSDD--VIYKIDVSANRYDLLCLEGIARALNVYNHKASIPKYQIVP-PKNSHEKLYISKEVESVRPVIVAGILRDITFTQESYDSFIDLQEKLHANICKKRSLVSIGTHDLDTLSGPFYYKALAPKDIKFVPLSQTKEYNAEELFKFYDESSSHLKKFLPIIKDSPVYPVIYDSKNVVCSLPPIINGEHSKIKL 249
BLAST of CV884713 vs. ExPASy Swiss-Prot
Match: SYFB_CANAL (Phenylalanyl-tRNA synthetase beta chain OS=Candida albicans GN=FRS1 PE=2 SV=3) HSP 1 Score: 266.159 bits (679), Expect = 1.409e-70 Identity = 139/248 (56.05%), Postives = 170/248 (68.55%), Query Frame = 1 Query: 10 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDEEVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHSAITL 753 MPT+ V ++ LF LG+SYT EEF++LCF FGIELD+ TTE D +G DE KIEVPANRYD+LC+EGIAQAL F P Y LS + + + +K T IR Y A+LR+++ DE +Y+SFI LQDKLH N+CR RTLVAIGTHDLDTL PFTYEAL P I F PL QT++ +ELMEFY+ D + K+LHII++SP+YPV+ D NRTV SLPPIIN HS ITL Sbjct: 1 MPTIPVDKEDLFKLLGRSYTTEEFDELCFQFGIELDEDTTE----------DVKG--TDERPQLKIEVPANRYDMLCIEGIAQALNEFLGNTSAPNYKLSPSKPE--ISLTIKESTYPIRQYAASAILRNVNLDERAYDSFIALQDKLHANLCRNRTLVAIGTHDLDTLTPPFTYEALAPKDIVFKPLNQTKEINGEELMEFYEKDKNIGKFLHIIKDSPVYPVMLDANRTVASLPPIINSDHSKITL 234
BLAST of CV884713 vs. ExPASy Swiss-Prot
Match: SYFB_SCHPO (Phenylalanyl-tRNA synthetase beta chain OS=Schizosaccharomyces pombe GN=SPAC23A1.12c PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 1.009e-68 Identity = 131/248 (52.82%), Postives = 163/248 (65.73%), Query Frame = 1 Query: 10 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDEEVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHSAITL 753 MPT+S ++ L+ ALG+ YT +EF++LCF FGIELD+ TT D E ++ + KI++PANRYD+LCLEGIAQAL VFN++ P+Y L S + + PETS IRPY A+LR + D Y SFI LQDKLH N+CR RTLVAIGTHD ++GPFTYEAL P INFVPL QT++ L+EFYK L +YLHII NSP YPV+ D R V SLPPIIN S I++ Sbjct: 1 MPTISCDKEELYKALGREYTTQEFDELCFQFGIELDEDTTN----------DPERSPSERPSL-KIDIPANRYDMLCLEGIAQALNVFNRRMATPQYKLLP----STTSLTISPETSEIRPYAAAAILRGVKLDPIRYQSFIALQDKLHANLCRNRTLVAIGTHDFSVMEGPFTYEALKPEEINFVPLNQTQEINGSNLLEFYKDSKHLSRYLHIIANSPRYPVILDAKRRVCSLPPIINSEFSKISV 233
BLAST of CV884713 vs. ExPASy Swiss-Prot
Match: SYFB_YEAST (Phenylalanyl-tRNA synthetase beta chain OS=Saccharomyces cerevisiae GN=FRS1 PE=1 SV=3) HSP 1 Score: 248.054 bits (632), Expect = 3.969e-65 Identity = 125/251 (49.80%), Postives = 175/251 (69.72%), Query Frame = 1 Query: 10 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDEEVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHINFVPLKQTRDFTADELMEFYKSDLK---LKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHSAITL 753 MPTVSV + +LF LGK+YT +EF++LCF FG+E+D+ TTE+A+ + EE K+++ ANRYDLLC+EGI+Q+L + +++E P Y LS + ++ + T IRP+ AVLR+I +E SY SFI LQDKLH N+CR R+LVA+GTHDLD+++GPF Y ALPP I FVPL QT++FT D+L+EFYKS + + +Y+HIIE+SP++PV+ D V SLPP+IN HS I++ Sbjct: 1 MPTVSVNKQQLFDLLGKNYTSQEFDELCFEFGMEMDEDTTEEAL------------KTGEEPELKLDISANRYDLLCIEGISQSLNEYLERKERPDYKLSKPTT----KLIIDKSTEQIRPFATAAVLRNIKLNEKSYASFIALQDKLHANLCRNRSLVAMGTHDLDSIEGPFHYRALPPKDIKFVPLNQTQEFTGDKLIEFYKSPEQKNNIGRYVHIIEDSPVFPVIMDSKDRVCSLPPLINSEHSKISV 235 The following BLAST results are available for this feature:
BLAST of CV884713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884713 ID=CV884713; Name=CV884713; organism=Citrus sinensis; type=EST; length=753bpback to top |