CV884712
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCA34_ARATH (Cyclin-A3-4 OS=Arabidopsis thaliana GN=CYCA3-4 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 2.221e-53 Identity = 97/149 (65.10%), Postives = 122/149 (81.88%), Query Frame = -2 Query: 497 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPSSPEIPGCYFEDI 943 EADIL +L+FELGSPT+KTFLRR TRVAQED+ S LQ+EFL YL+ELS+LDY CVK+LPS ++AS +FLARFI +P +HPW L+ Y+ YK ++++ CV ++HDLYLSRRG L+AVR KYKQHK+KCVAT P SPE+P +FEDI Sbjct: 216 EADILLALQFELGSPTIKTFLRRFTRVAQEDFKDSQLQIEFLCCYLSELSMLDYTCVKYLPSLLSASAVFLARFIIRPKQHPWNQMLEEYTKYKAADLQVCVGIIHDLYLSRRGNTLEAVRNKYKQHKYKCVATMPVSPELPLAFFEDI 364
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCA31_ARATH (Putative cyclin-A3-1 OS=Arabidopsis thaliana GN=CYCA3-1 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.592e-51 Identity = 96/149 (64.43%), Postives = 120/149 (80.54%), Query Frame = -2 Query: 497 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPSSPEIPGCYFEDI 943 EADIL +L+FELG+PT TFLRR TRVAQED+ S+LQ+EFL YL+ELS+LDY VKFLPS+VAAS +FLARFI +P +HPW L+ Y+ YK +++ CV ++HDLYLSR+ G L+A+REKYKQHKFKCVAT P SPE+P FED+ Sbjct: 205 EADILLALQFELGNPTSNTFLRRFTRVAQEDFEMSHLQMEFLCSYLSELSMLDYQSVKFLPSTVAASAVFLARFIIRPKQHPWNVMLEEYTRYKAGDLKECVAMIHDLYLSRKCGALEAIREKYKQHKFKCVATMPVSPELPLTVFEDV 353
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCA32_ARATH (Cyclin-A3-2 OS=Arabidopsis thaliana GN=CYCA3-2 PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.490e-49 Identity = 92/149 (61.74%), Postives = 119/149 (79.87%), Query Frame = -2 Query: 497 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPSSPEIPGCYFEDI 943 EADIL +L+FELG PT+ TF+RR TRVAQ+D+ +LQLE L YL+ELS+LDY VKF+PS +AAS +FLARFI +P +HPW L+ Y+ YK ++++ CV ++HDLYLSRRGG LQAVREKYK HKF+CVAT P SPE+P ++ED+ Sbjct: 222 EADILLALQFELGRPTINTFMRRFTRVAQDDFKVPHLQLEPLCCYLSELSILDYKTVKFVPSLLAASAVFLARFIIRPKQHPWNQMLEEYTKYKAADLQVCVGIIHDLYLSRRGGALQAVREKYKHHKFQCVATMPVSPELPVTFWEDV 370
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCNAL_DAUCA (G2/mitotic-specific cyclin C13-1 (Fragment) OS=Daucus carota PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.705e-45 Identity = 88/149 (59.06%), Postives = 116/149 (77.85%), Query Frame = -2 Query: 497 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPSSPEIPGCYFEDI 943 EAD+LK+LKFE+GSPTVKTFL + R QE+ + L+ EFL YLAELSLLDY C++F+PS +AASV FLARF +P+ +PW+ +LQ+ SGYK +++ CVL+LHDL + RRGG+L AVR+KYK+HKFKCV+T +PEIP F D+ Sbjct: 194 EADLLKTLKFEMGSPTVKTFLGFI-RAVQENPDVPKLKFEFLANYLAELSLLDYGCLEFVPSLIAASVTFLARFTIRPNVNPWSIALQKCSGYKSKDLKECVLLLHDLQMGRRGGSLSAVRDKYKKHKFKCVSTLSPAPEIPESIFNDV 341
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCA32_ORYSJ (Cyclin-A3-2 OS=Oryza sativa subsp. japonica GN=CYCA3-2 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.908e-45 Identity = 84/151 (55.63%), Postives = 114/151 (75.50%), Query Frame = -2 Query: 491 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPSSPEIPGCYFEDIKD 943 E+DILK L+FE+G+PT+KTFLRR TR QED S+L LEF+G YLAELSLLDY C++FLPS VAASV+F+A+ P +PW+ +Q+ +GYK SE++ C+L +HDL L ++ NL A+R+KYKQHKFKCV+T +IP Y +D+ + Sbjct: 235 ESDILKLLEFEMGNPTIKTFLRRFTRSCQEDKKRSSLLLEFMGSYLAELSLLDYGCLRFLPSVVAASVVFVAKLNIDPYTNPWSKKMQKLTGYKVSELKDCILAIHDLQLRKKCSNLTAIRDKYKQHKFKCVSTLLPPVDIPASYLQDLTE 385
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCA33_ARATH (Cyclin-A3-3 OS=Arabidopsis thaliana GN=CYCA3-3 PE=2 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.764e-42 Identity = 85/149 (57.05%), Postives = 111/149 (74.50%), Query Frame = -2 Query: 497 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPSSPEIPGCYFEDI 943 E DIL +L+FELG PT TFLRR RVAQED+ NLQLE L YL+ELS+LDY+CVKF+PS +AAS +FLARFI P++HPW+ L+ + YK ++++ CV ++ DLYLSR G +AVREKYKQHKF+ VA P E+P ++ED+ Sbjct: 176 EEDILLALEFELGRPTTNTFLRRFIRVAQEDFKVPNLQLEPLCCYLSELSMLDYSCVKFVPSLLAASAVFLARFIILPNQHPWSQMLEECTKYKAADLQVCVEIMLDLYLSRSEGASKAVREKYKQHKFQYVAAIPVYQELPVTFWEDV 324
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCA31_ORYSJ (Cyclin-A3-1 OS=Oryza sativa subsp. japonica GN=CYCA3-1 PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.264e-40 Identity = 80/151 (52.98%), Postives = 106/151 (70.20%), Query Frame = -2 Query: 491 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPSSPEIPGCYFEDIKD 943 E DIL LKFE+G+PT KTFLR R +QED +L LEF+ YLAELSLL+Y CV+ LPS VAASV+F+AR +PW+ LQ +GY+ SE++ C+ +HDL L+R+G +L A+R+KYKQH+FK V+T EIP YFED+ + Sbjct: 223 ERDILNVLKFEMGNPTTKTFLRMFIRSSQEDDKYPSLPLEFMCSYLAELSLLEYGCVRLLPSVVAASVVFVARLTLDSDTNPWSKKLQEVTGYRASELKDCITCIHDLQLNRKGSSLMAIRDKYKQHRFKGVSTLLPPVEIPASYFEDLNE 373
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCA14_ORYSJ (Cyclin-A1-4 OS=Oryza sativa subsp. japonica GN=CYCA1-4 PE=2 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 2.636e-38 Identity = 80/148 (54.05%), Postives = 105/148 (70.95%), Query Frame = -2 Query: 500 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPSSPEIPGCYFED 943 EA +LK LKFE+ +PT K FLRR R AQ + A L LEFL Y+AELSLL+Y+ + ++PS +AAS IFLA+FI +P+++PW ++L Y+ YKPS++ C LH L+L GGNL+AVREKY QHK+K VA S P IP +FED Sbjct: 202 EASVLKYLKFEMTAPTTKCFLRRFLRAAQVCHEAPVLHLEFLANYIAELSLLEYSLICYVPSLIAASSIFLAKFILKPTENPWNSTLSFYTQYKPSDLCNCAKGLHRLFLVGPGGNLRAVREKYSQHKYKFVAKKYSPPSIPAEFFED 349
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCA13_ORYSJ (Cyclin-A1-3 OS=Oryza sativa subsp. japonica GN=CYCA1-3 PE=3 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 1.308e-37 Identity = 80/148 (54.05%), Postives = 97/148 (65.54%), Query Frame = -2 Query: 500 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPSSPEIPGCYFED 943 EA +L LKFE+ +PT K FLRR RVAQ L LEFL Y+AELSLL+Y + + PS VAAS IFLA+FI QP+KHPW ++L Y+ YK SE+ CV LH L+ G NL A+REKY QHK+K VA P P IP +F D Sbjct: 341 EASVLNYLKFEMTAPTAKCFLRRFVRVAQVSDEDPALHLEFLANYVAELSLLEYNLLSYPPSLVAASAIFLAKFILQPAKHPWNSTLAHYTQYKSSELSDCVKALHRLFCVGPGSNLPAIREKYTQHKYKFVAKKPCPPSIPTEFFRD 488
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCA11_ORYSJ (Cyclin-A1-1 OS=Oryza sativa subsp. japonica GN=CYCA1-1 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.232e-37 Identity = 80/148 (54.05%), Postives = 97/148 (65.54%), Query Frame = -2 Query: 500 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPSSPEIPGCYFED 943 EA +L LKFE+ +PT K FLRR RVAQ L LEFL Y+AELSLL+Y + + PS VAAS IFLA+FI QP+KHPW ++L Y+ YK SE+ CV LH L+ G NL A+REKY QHK+K VA P P IP +F D Sbjct: 358 EASVLNYLKFEVTAPTAKCFLRRFVRVAQVSDEDPALHLEFLANYVAELSLLEYNLLSYPPSLVAASAIFLAKFILQPTKHPWNSTLAHYTQYKSSELSDCVKALHRLFSVGPGSNLPAIREKYTQHKYKFVAKKPCPPSIPTEFFRD 505 The following BLAST results are available for this feature:
BLAST of CV884712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884712 ID=CV884712; Name=CV884712; organism=Citrus sinensis; type=EST; length=944bpback to top |