CV884704

Overview
NameCV884704
Unique NameCV884704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7852 contig Csv1_Contig7852:253..1098. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP20_ARATH (Serine carboxypeptidase-like 20 OS=Arabidopsis thaliana GN=SCPL20 PE=2 SV=2)

HSP 1 Score: 338.191 bits (866), Expect = 3.483e-92
Identity = 159/230 (69.13%), Postives = 186/230 (80.87%), Query Frame = -2
Query:  153 SEVEKDIAGLNMYDILEPCYHGNETWEIAAANIR-LPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGIVPSWPQLLNSNSVPCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 839
            ++V  D   LN+Y+ILEPCYHG     ++A +IR LPSS  QLG+T++ LP+R RMFGRAWP+RAPV  GIVPSW QLL   +VPC DDRVAT WLND  +R AIH + ES  G WELC+ ++ F HDAGSMI +H+NLTL GYRALI+SGDHDMCVPFTGSEAWT+S+GYK++D+WR W SN QVAGYTQGY NNLTFLTIKGAGHTVPEYKPREALDFYSRFL G  +
Sbjct:  271 TKVNDDTNQLNIYNILEPCYHGTS---LSAFDIRSLPSSLLQLGKTEKRLPIRKRMFGRAWPVRAPVHPGIVPSWSQLLADVTVPCIDDRVATAWLNDPEIRKAIHTKEESEIGRWELCSGKLSFYHDAGSMIDFHRNLTLSGYRALIYSGDHDMCVPFTGSEAWTKSLGYKVIDEWRAWISNDQVAGYTQGYANNLTFLTIKGAGHTVPEYKPREALDFYSRFLEGSKI 497          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: CBP1_HORVU (Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CBP1 PE=1 SV=4)

HSP 1 Score: 333.183 bits (853), Expect = 1.121e-90
Identity = 152/230 (66.09%), Postives = 184/230 (80.00%), Query Frame = -2
Query:  153 LSEVEKDIAGLNMYDILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGIVPSWPQLLNSNSVPCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 842
            +S++E  I+GLN+YDILEPCYH     E+   N +LP SF+ LG T++P PVR RM GRAWPLRAPV+ G VPSW ++  ++ VPC  D VAT WL++AAVR+AIHA+  S  G W LCTD++ F HDAGSMI YHKNLT +GYRA+IFSGDHDMCVPFTGSEAWT+S+GY +VD WRPW +NGQV+GYT+GYE+ LTF TIKGAGHTVPEYKP+EA  FYSR+LAG  L
Sbjct:  272 ISKIESLISGLNIYDILEPCYHSRSIKEVNLQNSKLPQSFKDLGTTNKPFPVRTRMLGRAWPLRAPVKAGRVPSWQEV--ASGVPCMSDEVATAWLDNAAVRSAIHAQSVSAIGPWLLCTDKLYFVHDAGSMIAYHKNLTSQGYRAIIFSGDHDMCVPFTGSEAWTKSLGYGVVDSWRPWITNGQVSGYTEGYEHGLTFATIKGAGHTVPEYKPQEAFAFYSRWLAGSKL 499          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 331.257 bits (848), Expect = 4.258e-90
Identity = 155/232 (66.81%), Postives = 184/232 (79.31%), Query Frame = -2
Query:  153 KLSEVEKDIAGLNMYDILEPCYHGNETWEIAAANIR-LPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGIVPSWPQLLNSNSVPCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 845
            KL  V   +  LN+Y+ILEPCYHG     ++A +I  LP S   LG+T++P+ VR RMFGRAWPL A VR GIVPSW QLL    VPC DD VAT WLND AVR A+HA+ E   G+WELC+  + + HD GSMI+YH+NLTL G+RALIFSGDHDMCVP+TGSEAWT+++GYK+VD+WRPW SN QVAG+TQGY NNLTFLTIKGAGHTVPEYKPRE+LDFYSRFLAG+ +
Sbjct:  266 KLKTVSDTVNLLNLYNILEPCYHGTS---LSALDIEFLPKSLLTLGKTEKPMAVRKRMFGRAWPLGAVVRPGIVPSWSQLLAGFGVPCIDDTVATKWLNDPAVRKAVHAKEEKAIGNWELCSSNLEYRHDTGSMIEYHRNLTLSGFRALIFSGDHDMCVPYTGSEAWTKAMGYKVVDEWRPWMSNNQVAGFTQGYANNLTFLTIKGAGHTVPEYKPRESLDFYSRFLAGEKI 494          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: CBP1_ORYSJ (Serine carboxypeptidase 1 OS=Oryza sativa subsp. japonica GN=CBP1 PE=2 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 6.363e-86
Identity = 149/233 (63.95%), Postives = 176/233 (75.54%), Query Frame = -2
Query:  153 LSEVEKDIAGLNMYDILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGIVPSWPQLLNSN---SVPCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 842
            L +V+  I  LN+YDILEPCYH     ++  AN +LP SF+ LG T +PL VR RM GRAWPLRAPVR G VPSW +    +    VPC  D VAT WLN+  VR AIHA+P S  GSW +CT+ + F HDAGSMI YHKNLT +GYRA I+SGDHDMCVP+TG+EAWTRS+GY ++D WRPW  NGQV+GYTQGYE+ LTF TIKGAGHTVPEYKP+E+L FYSR+LAG  L
Sbjct:  278 LYKVDTSINDLNIYDILEPCYHSKTIKKVTPANTKLPKSFQHLGTTTKPLAVRTRMHGRAWPLRAPVRAGRVPSWQEFARGSRPSGVPCMSDEVATAWLNNDDVRAAIHAQPVSSIGSWLICTNVLDFIHDAGSMISYHKNLTGQGYRAFIYSGDHDMCVPYTGTEAWTRSLGYGVIDSWRPWHLNGQVSGYTQGYEHGLTFATIKGAGHTVPEYKPQESLAFYSRWLAGSKL 510          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP2_ARATH (Serine carboxypeptidase-like 2 OS=Arabidopsis thaliana GN=SCPL2 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.887e-36
Identity = 69/140 (49.29%), Postives = 94/140 (67.14%), Query Frame = -2
Query:  153 VATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 572
            + T W NDA VR A+    ESI G W  C   I +++D  S + YH N ++ GYR+LI+SGDHD+ VP+ G++AW RS+ Y I+D WRPW    Q+AGYT+ Y N +TF TIKG GHT+ E+KP EA   + R++ G+PL
Sbjct:  304 LTTYWANDATVREALQINKESI-GEWVRCYRTIPYDNDIKSSMPYHVNNSISGYRSLIYSGDHDLEVPYLGTQAWIRSLNYSIIDDWRPWMIKNQIAGYTRTYANKMTFATIKGGGHTI-EFKPEEASIMFQRWINGQPL 441          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP7_ARATH (Serine carboxypeptidase-like 7 OS=Arabidopsis thaliana GN=SCPL7 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 68/140 (48.57%), Postives = 91/140 (65.00%), Query Frame = -2
Query:  153 VATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 572
            + T W ND  V+ A+H    SI G W  C   I + HD  S + YH N ++ GY +LIFSGDHDM VP+ G++AW RS+ Y ++D WRPW    Q+AGYT+ Y N + F TIKG GHT PEYKP E+   + R+++G+PL
Sbjct:  300 LTTYWANDENVQRALHVNKGSI-GEWVRCYFEIPYNHDIKSSVPYHMNNSIDGYASLIFSGDHDMEVPYLGTQAWIRSLNYSLIDDWRPWMIGDQIAGYTRTYANKMAFATIKGGGHT-PEYKPEESYIMFQRWISGQPL 437          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP8_ARATH (Serine carboxypeptidase-like 8 OS=Arabidopsis thaliana GN=SCPL8 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.345e-35
Identity = 67/136 (49.26%), Postives = 88/136 (64.71%), Query Frame = -2
Query:  153 WLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 560
            W ND +VR A+H E  S  G W  C   I + HD  S I YH N ++ GYR+LI+SGDHD+ VPF  ++AW RS+ Y  +  WRPW  N Q+AGYT+ Y N +TF TIKG GHT  EY+P E    + R+++G+PL
Sbjct:  300 WANDESVREALHIEKGS-KGKWARCNRTIPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKGGGHTA-EYRPNETFIMFQRWISGQPL 433          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP52_ARATH (Putative serine carboxypeptidase-like 52 OS=Arabidopsis thaliana GN=SCPL52 PE=5 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 69/140 (49.29%), Postives = 90/140 (64.29%), Query Frame = -2
Query:  153 VATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 572
            +A  W ND  VR A+     SI G W  C   I ++ D  S I YH N ++ GYR+LI+SGDHDM VPF  +EAW RS+ Y I+D WRPW  N Q+AGYT  Y N +T+ TIK +GHT  EYKP E+   + R+++G+PL
Sbjct:   47 IAKYWANDERVREALQIRKGSI-GKWIRCNSNIHYDDDIISSIPYHMNNSINGYRSLIYSGDHDMEVPFLATEAWIRSLNYPIIDDWRPWIINNQIAGYTMTYANKMTYATIKASGHTA-EYKPAESFIMFQRWISGQPL 184          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP3_ARATH (Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.720e-35
Identity = 67/140 (47.86%), Postives = 92/140 (65.71%), Query Frame = -2
Query:  153 VATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 572
            +A  W ND  VR A+  + E+I G W  C   I + +D  S I YH N ++ GYR+LI+SGDHD  VPF G++AW RS+ Y ++D WRPW    Q+AGYT+ Y N +TF TI+G GHT+ E+KP EA   + R++ G+PL
Sbjct:  304 LAAYWANDETVRKALQIKKETI-GEWVRCHYGIPYNYDIKSSIPYHMNNSINGYRSLIYSGDHDFEVPFLGTQAWIRSLNYSVIDDWRPWMIKDQIAGYTRTYANKMTFATIRGGGHTI-EFKPEEASIMFQRWIKGQPL 441          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP12_ARATH (Serine carboxypeptidase-like 12 OS=Arabidopsis thaliana GN=SCPL12 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.720e-35
Identity = 66/138 (47.83%), Postives = 92/138 (66.67%), Query Frame = -2
Query:  153 WLNDAAVRTAIHAEPESIAGSWELCT--DRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 560
            W+ND +VR A+H    SI G WE CT  +RI +  D  + I YH N ++ GYR+LI+SGDHD+ VPF  ++AW +S+ Y I+ +WRPW    Q+AGYT+ Y N +TF T+KG+GHT  EYKP E    + R+++G  L
Sbjct:  300 WINDESVRDALHVNKSSI-GKWERCTYQNRIPYNKDINNSIPYHMNNSISGYRSLIYSGDHDLVVPFLATQAWIKSLNYSIIHEWRPWMIKDQIAGYTRTYSNKMTFATVKGSGHTA-EYKPNETFIMFQRWISGHDL 435          
The following BLAST results are available for this feature:
BLAST of CV884704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
SCP20_ARATH3.483e-9269.13Serine carboxypeptidase-like 20 OS=Arabidopsis tha... [more]
CBP1_HORVU1.121e-9066.09Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CB... [more]
SCP21_ARATH4.258e-9066.81Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
CBP1_ORYSJ6.363e-8663.95Serine carboxypeptidase 1 OS=Oryza sativa subsp. j... [more]
SCP2_ARATH7.887e-3649.29Serine carboxypeptidase-like 2 OS=Arabidopsis thal... [more]
SCP7_ARATH1.030e-3548.57Serine carboxypeptidase-like 7 OS=Arabidopsis thal... [more]
SCP8_ARATH1.345e-3549.26Serine carboxypeptidase-like 8 OS=Arabidopsis thal... [more]
SCP52_ARATH5.112e-3549.29Putative serine carboxypeptidase-like 52 OS=Arabid... [more]
SCP3_ARATH8.720e-3547.86Serine carboxypeptidase-like 3 OS=Arabidopsis thal... [more]
SCP12_ARATH8.720e-3547.83Serine carboxypeptidase-like 12 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010A12_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T7_A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884704 ID=CV884704; Name=CV884704; organism=Citrus sinensis; type=EST; length=846bp
TTGATCATTCTAATCTTAATATAAATTATTGATGTCTCTCATATTCTTTC
AGACACAGATTTTGATGAAGCAAAAGGATGAGTGTAGCAAGACTGCTCTC
TTTCTCAATCAAGCATAATGCACACAAGATCCCAGCTCATAGCACCCTTT
TACAGTGGTTTCCCGGCCAGAAAACGACTGTAAAAATCCAATGCCTCTCG
TGGTTTGTATTCTGGTACTGTATGACCAGCTCCCTTTATGGTTAAAAATG
TGAGGTTGTTTTCATATCCTTGAGTATATCCAGCAACTTGTCCATTGGAA
GTCCAAGGTCTCCATTTATCTACAATCTTATATCCAACCGACCTAGTCCA
TGCTTCACTCCCAGTGAAAGGAACACACATATCATGATCCCCACTGAATA
TGAGTGCCCGATATCCCCTGAGAGTGAGGTTCTTATGGTATTTGATCATG
CTCCCAGCATCATGTTCAAATAAAATCCTGTCTGTACATAATTCCCAACT
TCCAGCAATGCTCTCCGGTTCGGCATGAATTGCTGTCCTAACTGCTGCAT
CATTGAGCCATAGAGTTGCAACTCTATCATCTGTGCATGGCACAGAATTA
CTATTGAGAAGCTGGGGCCAACTTGGAACAATCCCGTCTCTTACAGGAGC
TCTAAGAGGCCAGGCACGACCAAACATCCTTATCCTCACAGGAAGAGGCC
TATCAGTCTCACCCAACTGCCGGAAGCTGGATGGTAACCTAATGTTAGCG
GCTGCAATCTCCCATGTCTCATTGCCATGATAGCACGGCTCTAAAATATC
ATACATGTTTAAACCTGCAATATCCTTCTCAACTTCAGAAAGCTTG
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