EY665306

Overview
NameEY665306
Unique NameEY665306
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665306 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.399e-11
Identity = 42/89 (47.19%), Postives = 52/89 (58.43%), Query Frame = 1 
Query:  400 PVYVGVSPFNYVYAANENQLHDEPEYSSFSFLEKDLHPGMKMNLHFPPTFKGATFSYLAKLPNPLPFLV*KIAGNLKPFFPGNPGSFEA 666
            PV+V V+PF Y YAA E QLHD+P  + F FLEKDLHPG  M +HF  T  G  F   ++  + +PF   K+   L   F   PGS EA
Sbjct:  185 PVHVNVAPFIYNYAATETQLHDDPNVALF-FLEKDLHPGKTMAVHFTATTAGEKFLPRSE-ADAMPFSSEKVPEILSR-FSVKPGSVEA 270
The following BLAST results are available for this feature:
BLAST of EY665306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BURP3_ORYSJ8.399e-1147.19BURP domain-containing protein 3 OS=Oryza sativa s... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-D07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665306 ID=EY665306; Name=EY665306; organism=Citrus sinensis; type=EST; length=973bp
TACATACTATCTTGTATTCTGGGTGTCTTTTAAAACATACTCAAAGCTAT
AATGGAGTTTCACTTGTTGCCCATCCTTGCTTTCCTCAGTCTAGCACTGG
TAGCAAGTCATGCTGACATTTCTCCTGAGCTTTACTGGAAAACTGTACTG
CCAAATTCCCCGATGCCAAAAGCTGTCAAAGATCTTCTACAGCCAGATGT
GCTGGAAGACAAAAGCACCTCTGTCAACGTAGGGAAGGGTGGTGTCAATG
TGGATGCAGGGAAAGGAAAGCCCGGTGGTGGCACCCATGTGAATGTTGGG
GGTAAGGGCGTTGGTGTAAACACTGGAAAGCCTGACAAAAGAACCAGTGT
TGGTGTTGGCAAAGGAGGAGTATCCGTAAGTACAGGACACAAGGGAAAGC
CAGTTTATGTTGGAGTAAGCCCATTCAACTATGTATATGCTGCAAATGAG
AACCAACTCCATGATGAACCCGAATACAGCTCTTTTTCTTTCTTGGAAAA
GGACTTGCATCCTGGCATGAAAATGAACTTGCACTTTCCTCCAACTTTCA
AGGGAGCAACTTTTTCTTATCTCGCCAAGCTGCCAAATCCACTCCCTTTT
CTCGTCTGAAAAATTGCCGGAAATCTTAAACCATTTTTCCCGGGAAACCC
GGGATCATTTGAAGCCTAAAATAATGGCAAAAAAAACAATCCAAAGAATG
GGGAAAAACCCCTGGCCTTTAAAAGGGAAAAAAAAAAAATTTTTGGGCAA
CTTTCCCCGGGGAACCCAAGGAATGGCTTTCCGCCCTTTTTAAACCTTGG
GAAAAAAGGTGTCCGGGCAATTTTTCCCCAGGAAGGTAAAAAAAAAAGGA
AAAACCAAAAAAAAGACAAAAAAATTAAAAAAACCCCCCACCCGGTGGGG
GGGGGAAAAACAAAAAAAGGGGCGGACCGTATGAAAAAAAATTCTCACTT
AATGGGGGGGGGGGCCCCAAAAA
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