EY665305

Overview
NameEY665305
Unique NameEY665305
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665305 vs. ExPASy Swiss-Prot
Match: LAX1_ORYSJ (Auxin transporter-like protein 1 OS=Oryza sativa subsp. japonica GN=Os01g0856500 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 8.773e-21
Identity = 54/88 (61.36%), Postives = 65/88 (73.86%), Query Frame = 1
Query:  154 WVGSCLAMPGFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLY*S-TEQKEKKRTSKQS---SWLNVVGMVL 405
            W G  +    FSCASNQVAQVLLTLPYSFSQ+GMLSG+LLQ+FYGF+GSWTAYLISVLY     +KEK+  S ++    W  V+  +L
Sbjct:   51 WHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGVLLQLFYGFMGSWTAYLISVLYVEYRSRKEKEGVSFKNHVIQWFEVLDGLL 138          
BLAST of EY665305 vs. ExPASy Swiss-Prot
Match: LAX2_MEDTR (Auxin transporter-like protein 2 OS=Medicago truncatula GN=LAX2 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.146e-20
Identity = 51/75 (68.00%), Postives = 59/75 (78.67%), Query Frame = 1
Query:  133 IEXFLWSWVGSCLAMPGFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLY*STEQKEKK 357
            ++ FLW   G  +    FSCASNQVAQVLLTLPYSFSQ+GMLSGILLQ+FYG LGSWTAYLISVLY     +++K
Sbjct:   38 VKNFLWH--GGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQVFYGILGSWTAYLISVLYVEYRSRKEK 110          
BLAST of EY665305 vs. ExPASy Swiss-Prot
Match: LAX1_ARATH (Auxin transporter-like protein 1 OS=Arabidopsis thaliana GN=LAX1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.552e-20
Identity = 50/72 (69.44%), Postives = 56/72 (77.78%), Query Frame = 1
Query:  154 WVGSCLAMPGFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLY*STEQKEKKRTSK 369
            W G       FSCASNQVAQVLLTLPYSFSQ+GMLSGILLQIFYG +GSWTAYLISVLY     + +K+ +K
Sbjct:   48 WHGGSAWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQIFYGLMGSWTAYLISVLYVEYRARMEKQEAK 119          
BLAST of EY665305 vs. ExPASy Swiss-Prot
Match: AUX1_ARATH (Auxin transporter protein 1 OS=Arabidopsis thaliana GN=AUX1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.354e-20
Identity = 49/68 (72.06%), Postives = 55/68 (80.88%), Query Frame = 1
Query:  154 WVGSCLAMPGFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLY*STEQKEKK 357
            W G  +    FSCASNQVAQVLLTLPYSFSQ+GMLSGI+LQIFYG LGSWTAYLISVLY     +++K
Sbjct:   43 WHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIVLQIFYGLLGSWTAYLISVLYVEYRARKEK 110          
BLAST of EY665305 vs. ExPASy Swiss-Prot
Match: LAX2_ORYSJ (Auxin transporter-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0447200 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.686e-20
Identity = 53/88 (60.23%), Postives = 64/88 (72.73%), Query Frame = 1
Query:  154 WVGSCLAMPGFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLY*S-TEQKEKKRTSKQS---SWLNVVGMVL 405
            W G  +    FSCASNQVAQVLLTLPYSFSQ+GMLSG+LLQ+FYG +GSWTAYLISVLY     +KEK+  S ++    W  V+  +L
Sbjct:   42 WHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGLLLQVFYGLMGSWTAYLISVLYVEYRARKEKEGVSFKNHVIQWFEVLDGLL 129          
BLAST of EY665305 vs. ExPASy Swiss-Prot
Match: LAX5_MEDTR (Auxin transporter-like protein 5 OS=Medicago truncatula GN=LAX5 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.699e-20
Identity = 52/88 (59.09%), Postives = 63/88 (71.59%), Query Frame = 1
Query:  154 WVGSCLAMPGFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLY*S-TEQKEKKRTSKQS---SWLNVVGMVL 405
            W G       FSCASNQVAQVLLTLPYSFSQ+GMLSGIL Q+FYG LGSWTAYLIS+LY     +KE+++ + +S    W  V+  +L
Sbjct:   39 WHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGILGSWTAYLISILYVEYRTRKEREKVNFRSHVIQWFEVLDGLL 126          
BLAST of EY665305 vs. ExPASy Swiss-Prot
Match: LAX3_MEDTR (Auxin transporter-like protein 3 OS=Medicago truncatula GN=LAX3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.699e-20
Identity = 49/72 (68.06%), Postives = 55/72 (76.39%), Query Frame = 1
Query:  154 WVGSCLAMPGFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLY*STEQKEKKRTSK 369
            W G  +    FSCASNQVAQVLLTLPYSFSQ+GMLSGIL QIFYG +GSWTAY+ISVLY   E + +K   K
Sbjct:   36 WHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQIFYGLMGSWTAYIISVLY--VEYRTRKEREK 105          
BLAST of EY665305 vs. ExPASy Swiss-Prot
Match: LAX2_ARATH (Auxin transporter-like protein 2 OS=Arabidopsis thaliana GN=LAX2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.267e-19
Identity = 49/72 (68.06%), Postives = 54/72 (75.00%), Query Frame = 1
Query:  154 WVGSCLAMPGFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLY*STEQKEKKRTSK 369
            W G       FSCASNQVAQVLLTLPYSFSQ+GMLSGIL Q+FYG LGSWTAYLIS+LY   E + +K   K
Sbjct:   37 WHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGILGSWTAYLISILY--VEYRTRKEREK 106          
BLAST of EY665305 vs. ExPASy Swiss-Prot
Match: LAX3_ARATH (Auxin transporter-like protein 3 OS=Arabidopsis thaliana GN=LAX3 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.654e-19
Identity = 48/72 (66.67%), Postives = 55/72 (76.39%), Query Frame = 1
Query:  154 WVGSCLAMPGFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLY*STEQKEKKRTSK 369
            W G  +    FSCASNQVAQVLLTLPYSFSQ+GM+SGIL Q+FYG +GSWTAYLISVLY   E + +K   K
Sbjct:   41 WHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMMSGILFQLFYGLMGSWTAYLISVLY--VEYRTRKEREK 110          
BLAST of EY665305 vs. ExPASy Swiss-Prot
Match: LAX1_MEDTR (Auxin transporter-like protein 1 OS=Medicago truncatula GN=LAX1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.654e-19
Identity = 49/84 (58.33%), Postives = 61/84 (72.62%), Query Frame = 1
Query:  154 WVGSCLAMPGFSCASNQVAQVLLTLPYSFSQMGMLSGILLQIFYGFLGSWTAYLISVLY*S-TEQKEKKRTSKQS---SWLNVV 393
            W G  +    FSCASNQVAQVLLTLPYSFSQ+GM+SGI+ Q+FYG +GSWTAYLIS+LY     +KEK+  S ++    W  V+
Sbjct:   42 WHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMISGIIFQVFYGLMGSWTAYLISILYVEYRSRKEKENVSFKNHVIQWFEVL 125          
The following BLAST results are available for this feature:
BLAST of EY665305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
LAX1_ORYSJ8.773e-2161.36Auxin transporter-like protein 1 OS=Oryza sativa s... [more]
LAX2_MEDTR1.146e-2068.00Auxin transporter-like protein 2 OS=Medicago trunc... [more]
LAX1_ARATH2.552e-2069.44Auxin transporter-like protein 1 OS=Arabidopsis th... [more]
AUX1_ARATH4.354e-2072.06Auxin transporter protein 1 OS=Arabidopsis thalian... [more]
LAX2_ORYSJ5.686e-2060.23Auxin transporter-like protein 2 OS=Oryza sativa s... [more]
LAX5_MEDTR9.699e-2059.09Auxin transporter-like protein 5 OS=Medicago trunc... [more]
LAX3_MEDTR9.699e-2068.06Auxin transporter-like protein 3 OS=Medicago trunc... [more]
LAX2_ARATH1.267e-1968.06Auxin transporter-like protein 2 OS=Arabidopsis th... [more]
LAX3_ARATH1.654e-1966.67Auxin transporter-like protein 3 OS=Arabidopsis th... [more]
LAX1_MEDTR1.654e-1958.33Auxin transporter-like protein 1 OS=Medicago trunc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-D06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665305 ID=EY665305; Name=EY665305; organism=Citrus sinensis; type=EST; length=809bp
TTGTCGTGGGACCGGTCGGGAAACGGGTGCCCCGGTAAATTTCCCCGGGG
TTCGTACACCACGNCGTNTCCGTGTGGTAAAAGTAAGAATTAATACAACA
ACAGNCTAACACCTCCACTGTCTCATGCATGNATAGAGTNCTTTCTCTGG
TCATGGGTTGGCTCCTGCTTGGCGATGCCTGGGTTCAGCTGCGCTTCCAA
TCAAGTTGCTCAAGTTCTCTTGACTCTGCCCTATTCATTCTCTCAAATGG
GTATGCTTTCAGGCATCTTGCTTCAAATTTTCTACGGATTCCTTGGAAGC
TGGACTGCTTATCTCATCAGTGTACTCTACTAGAGTACAGAACAGAAAGA
GAAAAAACGTACTTCAAAACAGTCTTCATGGTTGAATGTTGTGGGTATGG
TCCTATTGAACTGTAGATTGCTCACTGACTTCTCTATCGATTGCTACACT
GAACTGTGATAACTTACACTCACACGATGAAAAGACTGATATATTTGACT
GTGGTACCAGCAAGCTCNTCCNTACTATTTCCTCCNCCNCTACATNCCTC
TTATACTACTCTTTCTGCTGTAAGGTCCACGACAAATATGTATCAGACCA
TATAATTCGGACCTCATGATCGACTGGACCATTAGTTTTTCCTGATTACG
AACACCTGTTTGTTGACAAACACACTCCCCAACGGGCGGTCAGATCTTAT
TGCTCTATTGAAGAAAAAAATCGGCAACGACTGTTTCTTAACAGTTGCAA
CTATCAGCAGAATTAAAAATGTGTGGACATAAACCGCAAAATAAAATGAA
AGAGAAGAA
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