EY665302

Overview
NameEY665302
Unique NameEY665302
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1041
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665302 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.974e-29
Identity = 78/155 (50.32%), Postives = 104/155 (67.10%), Query Frame = 2
Query:   74 CLEALSSQLVLPASKSGVYQFSSVK--YLPGTLQRNVSLSVRCMAKNEQQKDQ-----------STQPP-----KLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTSVLLSVC--VPWFLCLKVSA 478
            C   +S+ +   +S+S V QF+++   Y+P TL+RNVSL VR MA+ E ++             ST  P     + P++STKFSD+ AFSGPAPERINGRLAMIGFVAA+ VE++KGQ +  QLS GGVAWFLGTSVLLS+   +P+F  + V +
Sbjct:    6 CQSIMSNSMTNISSRSRVNQFTNIPSVYIP-TLRRNVSLKVRSMAEGEPKEQSKVAVDPTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVES 159          
BLAST of EY665302 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.662e-17
Identity = 50/104 (48.08%), Postives = 68/104 (65.38%), Query Frame = 2
Query:  164 LQRNVSLSVRCMAKN------EQQKDQSTQP------PKLPRISTKFS-DVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTSVLL 436
            ++RN   +VR M ++      +QQK Q T        P    ++TK + D+F+F G APERINGR AMIGFVAA+ VEL+ G+DVF+Q+ +GGV WFL TS +L
Sbjct:   41 MRRNAKFTVRSMREDNEKEEQQQQKQQQTHDGGPDLTPNRTEVTTKRTVDLFSFDGLAPERINGRSAMIGFVAAVGVELATGRDVFSQVFNGGVMWFLLTSAVL 144          

HSP 2 Score: 21.9422 bits (45), Expect = 1.662e-17
Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 3
Query:  483 EPKSKGFMTSDAELVEW-GRF 542
            E K+ GF  SDAE+  W GRF
Sbjct:  159 EAKNNGFWNSDAEI--WNGRF 177          
BLAST of EY665302 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.467e-16
Identity = 49/113 (43.36%), Postives = 65/113 (57.52%), Query Frame = 2
Query:  110 ASKSGVYQFSSVKYLP-GTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDG-GVAWFLGTSVLLSV 442
            A+   +  F+    LP G+ +   +L  R +    Q +  +  PP  P+ ST   D  AFSGPAPERINGRLAM+GFV ALAVE  +G  + +QL  G G AWF  T  +LS+
Sbjct:    2 ATMMAMSSFAGAAVLPRGSARSLPALGRRTLVVRAQTEGPNAPPPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSM 114          
BLAST of EY665302 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.282e-16
Identity = 45/89 (50.56%), Postives = 55/89 (61.80%), Query Frame = 2
Query:  179 SLSVRCMAKNEQQKDQSTQPPKLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDG-GVAWFLGTSVLLSV 442
            +L  R +    Q +  S  PP  P+ ST   D  AFSGPAPERINGRLAM+GFV ALAVE  +G  + +QL  G G AWF  T  +LS+
Sbjct:   31 ALGRRALVVRAQTEGPSAPPPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSM 119          
BLAST of EY665302 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.421e-11
Identity = 40/78 (51.28%), Postives = 51/78 (65.38%), Query Frame = 2
Query:  230 TQPPKLPRISTKFS-----DVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLS--DGGVAWFLGTSVLLSV 442
            T  P  P+  TK +     D  AFSGPAPERINGRLAM+GFVAAL+VE ++G  +  Q+     G+AWFL T+ + SV
Sbjct:  101 TTIPAAPKPVTKKANPSVWDALAFSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSV 178          
The following BLAST results are available for this feature:
BLAST of EY665302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ELI_PEA1.974e-2950.32Early light-induced protein, chloroplastic OS=Pisu... [more]
DS22_CRAPL1.662e-1748.08Desiccation stress protein DSP-22, chloroplastic O... [more]
ELI6_HORVU1.467e-1643.36Low molecular mass early light-inducible protein H... [more]
ELI9_HORVU7.282e-1650.56Low molecular mass early light-inducible protein H... [more]
ELI5_HORVU1.421e-1151.28High molecular mass early light-inducible protein ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-D02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665302 ID=EY665302; Name=EY665302; organism=Citrus sinensis; type=EST; length=1041bp
CCCGCGTCCGTGCTAAATTATTCCTCCGTTGCATAATCTACAAAAATGGC
TGCTTCACTCGCCACTCAATCTATGCTTGGAAGCTCTGTCGTCGCAGCTC
GTGTTACCGGCATCAAAATCTGGGGTGTACCAATTTTCCTCTGTTAAGTA
CTTACCTGGTACTCTGCAGAGAAATGTTAGCTTATCAGTGCGCTGCATGG
CTAAGAATGAGCAGCAGAAGGATCAATCAACTCAGCCACCAAAGCTACCG
CGTATAAGCACGAAGTTCTCTGACGTGTTTGCGTTCAGCGGGCCGGCACC
GGAGAGGATAAACGGGAGGCTTGCGATGATTGGGTTCGTGGCTGCATTGG
CGGTGGAGCTATCCAAGGGTCAGGATGTGTTTGCCCAGTTATCAGACGGT
GGAGTTGCCTGGTTCTTGGGGACCAGTGTTCTGCTTTCGGTTTGCGTCCC
CTGGTTCCTTTGTTTAAAGGTGTCAGCGTGGGGAGCCAAAATCGAAAGGG
TTCATGACTTCTGATGCTGAGTTGGTGGAATGGGGAAGGTTTCCCTTTGG
ATGGGTCTTGGGTTGCTTTTGGCTTGGCACTTGGAGTTTTGGAAAAAGGG
AGTAACCCCCTTGGTTTAGTTAAATTCCAATTTTTTCCCAGGTGTTATGC
GGAACTGGCCAAAGTTTTGGGAAATGGAAAAACGAAAACCCAATTCCTTA
AAAACTTAAAAACCGCACGATCTCGGTTTATTTTCCCCGAGGGCTAAATT
AATTGGTATAAAGAATAATATGGGGGGGGGTTGGTAATGAAAAAATATAT
GTGAATTTCACCAAGGCAACTATATTTAATATAATTAAAAACTAACCATT
TTTTAAAAATTTTAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAGAGG
GGTGGATGCGTGTTATAAGAAAAATAATTACAAAAAGATAAAAAGTAGCG
AGAGAGGGGAGGAGAGGGTAAAAAGAAAAATGAAAAATAACATATTGATA
TAAATTGTGGCAGATGAAACAATTAAAAGATTTTACTTAAA
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