CV884591

Overview
NameCV884591
Unique NameCV884591
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884591 vs. ExPASy Swiss-Prot
Match: MCM3_ARATH (DNA replication licensing factor MCM3 homolog OS=Arabidopsis thaliana GN=MCM3 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.757e-45
Identity = 109/207 (52.66%), Postives = 135/207 (65.22%), Query Frame = -1
Query:  329 EQIATAYAELRNSSSNAKTGGTLPITARTLETIIRLSTAHAKMKLNRKISKSDVEAALKALNFAIYHKELTEMXXXXXXXXXXXEKNPRAEHPG--GNDR---ADHSTNDNER-------SMDVDEPPAAVSGVNVSPQRMEAFNSVFGQHMRANRLDLITITELEEIV-NTGMDA-HYSRAEITFLLEKLQDENRVMIADGIVHMI 907
            E+IA AYA+LRN+ S+ KTGGTLPITARTLETIIRL+TAHAKMKL+ +++K+D EAALK +NFAIYH+ELTEM           +        G  GN R    D + ND           M+VDEP        VS  R+E F  VFGQHMR +RLD I+I ++E +V N G+ A  YS  EI  LLEKLQD+N+VMI+DG VH+I
Sbjct:  570 ERIAEAYADLRNAGSDTKTGGTLPITARTLETIIRLATAHAKMKLSSEVTKADAEAALKLMNFAIYHQELTEMDDREQEERQREQAEQERTPSGRRGNQRRNNEDGAENDTANVDSETADPMEVDEPSVEQFSGTVSAARIETFERVFGQHMRTHRLDDISIADIETVVNNNGVGASRYSADEIMALLEKLQDDNKVMISDGKVHII 776          
BLAST of CV884591 vs. ExPASy Swiss-Prot
Match: MCM33_MAIZE (DNA replication licensing factor MCM3 homolog 3 OS=Zea mays GN=ROA3 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.703e-45
Identity = 100/194 (51.55%), Postives = 135/194 (69.59%), Query Frame = -1
Query:  329 EQIATAYAELRNSSSNAKTGG-TLPITARTLETIIRLSTAHAKMKLNRKISKSDVEAALKALNFAIYHKELTEMXXXXXXXXXXXEKNPRAEHPGGNDRADHSTNDNERSMDVDEPPAAVSGVNVSPQRMEAFNSVFGQHMRANRLDLITITELEEIVNTGMDAHYSRAEITFLLEKLQDENRVMIADGIVHMI 907
            + IAT+YAELR+ S+NAK+GG TLPITARTLETIIRLSTAHAKMKL  ++ KSDVEAAL+ LNFAIYHKELTEM           ++        G     H ++ N+  MDVD      +  NVS +R++AF ++ GQH+ AN +D ++I E+E++VN    A Y+R+++ F+LE++QD NRVMI DG+V +I
Sbjct:  579 DHIATSYAELRDGSANAKSGGGTLPITARTLETIIRLSTAHAKMKLRHEVLKSDVEAALQVLNFAIYHKELTEMEEREQREMEMKQQADHDAGATGGTVDGHGSSGND-PMDVD---VGSNDQNVSAERIQAFEALLGQHVLANHIDQMSIDEIEQMVNRESTAPYTRSQVEFILERMQDANRVMIRDGVVRII 768          
BLAST of CV884591 vs. ExPASy Swiss-Prot
Match: MCM32_MAIZE (DNA replication licensing factor MCM3 homolog 2 OS=Zea mays GN=ROA2 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.703e-45
Identity = 100/194 (51.55%), Postives = 135/194 (69.59%), Query Frame = -1
Query:  329 EQIATAYAELRNSSSNAKTGG-TLPITARTLETIIRLSTAHAKMKLNRKISKSDVEAALKALNFAIYHKELTEMXXXXXXXXXXXEKNPRAEHPGGNDRADHSTNDNERSMDVDEPPAAVSGVNVSPQRMEAFNSVFGQHMRANRLDLITITELEEIVNTGMDAHYSRAEITFLLEKLQDENRVMIADGIVHMI 907
            + IAT+YAELR+ S+NAK+GG TLPITARTLETIIRLSTAHAKMKL  ++ KSDVEAAL+ LNFAIYHKELTEM           ++        G     H ++ N+  MDVD      +  NVS +R+EAF ++ GQH+ AN +D ++I ++E++VN    A Y+R+++ F+LE++QD NRVMI DG+V +I
Sbjct:  579 DHIATSYAELRDGSANAKSGGGTLPITARTLETIIRLSTAHAKMKLRHEVLKSDVEAALQVLNFAIYHKELTEMEEREQREMEMKQQADHDAGATGGTVDGHGSSGND-PMDVD---VGSNDQNVSAERIEAFEALLGQHVLANHIDQMSIDDIEQMVNRESTAPYTRSQVEFILERMQDANRVMIRDGVVRII 768          
BLAST of CV884591 vs. ExPASy Swiss-Prot
Match: MCM31_MAIZE (DNA replication licensing factor MCM3 homolog 1 OS=Zea mays GN=ROA1 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 4.703e-45
Identity = 103/196 (52.55%), Postives = 135/196 (68.88%), Query Frame = -1
Query:  329 EQIATAYAELRNSSSNAKTGG-TLPITARTLETIIRLSTAHAKMKLNRKISKSDVEAALKALNFAIYHKELTEMXXXXXXXXXXXEKNPRAEHPGG--NDRADHSTNDNERSMDVDEPPAAVSGVNVSPQRMEAFNSVFGQHMRANRLDLITITELEEIVNTGMDAHYSRAEITFLLEKLQDENRVMIADGIVHMI 907
            + IAT+YAELR+ S+NAK+GG TLPITARTLE+IIRLSTAHAKMKL  ++ KSDVEAAL+ LNFAIYHKELTEM           E   +AEH  G      D   +     MDVD      +  NVS +R+EAF ++ GQH+ AN +D ++I E+E++VN    A Y+R+++ F+LE++QD NRVMI DG+V +I
Sbjct:  579 DHIATSYAELRDGSANAKSGGGTLPITARTLESIIRLSTAHAKMKLRHEVLKSDVEAALQVLNFAIYHKELTEM---EEREQKEMEMKQQAEHDAGATGGTVDGHGSSGNDPMDVD---VGSNDQNVSAERIEAFEALLGQHVLANHIDQMSIDEIEQMVNRESTAPYTRSQVEFILERMQDANRVMIRDGVVRII 768          
BLAST of CV884591 vs. ExPASy Swiss-Prot
Match: MCM3Z_XENTR (Zygotic DNA replication licensing factor mcm3 OS=Xenopus tropicalis GN=zmcm3 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.862e-17
Identity = 63/219 (28.77%), Postives = 104/219 (47.49%), Query Frame = -1
Query:  329 IATAYAELRNSSS-NAKTGGTLPITARTLETIIRLSTAHAKMKLNRKISKSDVEAALKALNFAIYHKELT----------------EMXXXXXXXXXXXEKNPRAEHPGGNDRADHSTNDNERSMDVDEPPAAVSG-----------VNVSPQRMEAFNSVFGQHMRANRLDLITITELEEIVNTGMDAHYSRAEITFLLEKLQDENRVMIADGIVHMI 901
            IA  Y+ LRN    +     T P+TARTLET+IRLSTAHAK+++++ +   D EAA++ + +A + K L                 E             K  RA+    +D  + S  ++E  + V  P   V+G             +S +R++AF S      ++     I +  L E +N   D+ +S+AE+   LE +++ N +M++D IV +I
Sbjct:  592 IAEEYSRLRNQDQLSTDVARTSPVTARTLETLIRLSTAHAKVRMSKTVQLQDAEAAIELVQYAYFKKVLEKEKKRRRRDEDSDTEGEQQTQPDGEAKKRRKKRRAQEGESHDPYEFSDTEDETPV-VHTPKTPVNGQEEMETDSSAKPGLSGERLKAFKSALLGAFKSAHAQSIAMEALMEAINKRNDSPFSQAEVKAALELMEEANHIMVSDNIVFLI 809          
BLAST of CV884591 vs. ExPASy Swiss-Prot
Match: MCM3Z_XENLA (Zygotic DNA replication licensing factor mcm3 OS=Xenopus laevis GN=zmcm3 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.432e-17
Identity = 63/218 (28.90%), Postives = 102/218 (46.79%), Query Frame = -1
Query:  329 IATAYAELRNSSS-NAKTGGTLPITARTLETIIRLSTAHAKMKLNRKISKSDVEAALKALNFAIYHKEL---------------TEMXXXXXXXXXXXEKNPRAEHPGGNDRADHSTNDNERSMDVDEPPAAVSG-----------VNVSPQRMEAFNSVFGQHMRANRLDLITITELEEIVNTGMDAHYSRAEITFLLEKLQDENRVMIADGIVHMI 901
            IA  Y  LRN    +     T P+TAR+LET+IRLSTAHAK+++++ +   D EAAL+ + +A + K L                E             K  RA+    +D  + S  ++E  + V  P   V+G             +S  R++AF S      +A     I +  + E +N   D+ +S+AE+   LE +++ N +M++D IV +I
Sbjct:  590 IAEEYTRLRNQDQMSTDVARTSPVTARSLETLIRLSTAHAKVRMSKTVQLQDAEAALELVQYAYFKKVLEKEKKRRRREGESDTEEEQTQPDGEGKKRRKKRRAQDGESHDPYEFSDTEDETPV-VHTPKTPVNGQEEMETDSSAKPGLSGDRLKAFKSALLDAFKAAHAQSIAMAAMMEAINKNNDSPFSQAEVKAALELMEEANHIMVSDNIVFLI 806          
BLAST of CV884591 vs. ExPASy Swiss-Prot
Match: MCM3_PONAB (DNA replication licensing factor MCM3 OS=Pongo abelii GN=MCM3 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.577e-16
Identity = 63/219 (28.77%), Postives = 101/219 (46.12%), Query Frame = -1
Query:  329 IATAYAELRNSSS-NAKTGGTLPITARTLETIIRLSTAHAKMKLNRKISKSDVEAALKALNFAIYHKEL-------------------TEMXXXXXXXXXXXEKNPRAEHPGGNDRADHSTNDNERSM-DVDEPPAAVS-------GVNVSPQRMEAFNSVFGQHMRANRLDLITITELEEIVNTGMDAHYSRAEITFLLEKLQDENRVMIADGIVHMI 901
            IA  Y+ LR+  S ++ T  T P+TARTLET+IRL+TAHAK ++++ +   D E A++ + +A + K L                    E             K  +++   G+    +  +D E  M  V  P  A S        V +S  R++AF        R      I +  L E +N   +  +S  EI   L K+QD+N+VM+++GI+ +I
Sbjct:  590 IAEEYSRLRSQDSMSSDTARTSPVTARTLETLIRLATAHAKARMSKTVDLQDAEEAVELVQYAYFKKVLEKEKKRKKRSEDESETEDEEEKSQEDQEQKRKRRKTRQSDAKDGDSYDPYDFSDTEEEMPQVHTPKTADSQETKESQKVELSESRLKAFKVALLDVFREAHAQSIGMNRLTESINRDSEEPFSSVEIQAALSKMQDDNQVMVSEGIIFLI 808          
BLAST of CV884591 vs. ExPASy Swiss-Prot
Match: MCM3_HUMAN (DNA replication licensing factor MCM3 OS=Homo sapiens GN=MCM3 PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 2.689e-16
Identity = 63/219 (28.77%), Postives = 100/219 (45.66%), Query Frame = -1
Query:  329 IATAYAELRNSSS-NAKTGGTLPITARTLETIIRLSTAHAKMKLNRKISKSDVEAALKALNFAIYHKEL-------------------TEMXXXXXXXXXXXEKNPRAEHPGGNDRADHSTNDNERSM-DVDEPPAAVS-------GVNVSPQRMEAFNSVFGQHMRANRLDLITITELEEIVNTGMDAHYSRAEITFLLEKLQDENRVMIADGIVHMI 901
            IA  Y+ LR+  S ++ T  T P+TARTLET+IRL+TAHAK ++++ +   D E A++ + +A + K L                    E             K  + +   G+    +  +D E  M  V  P  A S        V +S  R++AF        R      I +  L E +N   +  +S  EI   L K+QD+N+VM+++GI+ +I
Sbjct:  590 IAEEYSRLRSQDSMSSDTARTSPVTARTLETLIRLATAHAKARMSKTVDLQDAEEAVELVQYAYFKKVLEKEKKRKKRSEDESETEDEEEKSQEDQEQKRKRRKTRQPDAKDGDSYDPYDFSDTEEEMPQVHTPKTADSQETKESQKVELSESRLKAFKVALLDVFREAHAQSIGMNRLTESINRDSEEPFSSVEIQAALSKMQDDNQVMVSEGIIFLI 808          
The following BLAST results are available for this feature:
BLAST of CV884591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
MCM3_ARATH2.757e-4552.66DNA replication licensing factor MCM3 homolog OS=A... [more]
MCM33_MAIZE4.703e-4551.55DNA replication licensing factor MCM3 homolog 3 OS... [more]
MCM32_MAIZE4.703e-4551.55DNA replication licensing factor MCM3 homolog 2 OS... [more]
MCM31_MAIZE4.703e-4552.55DNA replication licensing factor MCM3 homolog 1 OS... [more]
MCM3Z_XENTR1.862e-1728.77Zygotic DNA replication licensing factor mcm3 OS=X... [more]
MCM3Z_XENLA2.432e-1728.90Zygotic DNA replication licensing factor mcm3 OS=X... [more]
MCM3_PONAB1.577e-1628.77DNA replication licensing factor MCM3 OS=Pongo abe... [more]
MCM3_HUMAN2.689e-1628.77DNA replication licensing factor MCM3 OS=Homo sapi... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008D07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884591 ID=CV884591; Name=CV884591; organism=Citrus sinensis; type=EST; length=907bp
GGATATGGATGGGTCAATCTTTTCTCATCTTTCGTTCACCTCTAGCTGGG
ACCAAGACAAAAACAAATAACCTACCAAGCATGGAACATACCAGATGTTG
CAGGAAGTTTGCAATACAAGATACTAAAGATAAATTAAATATACATTGCT
TCTCTTTGGGGTATCTAAGAACTGCGACTTCAATAAACTGTAATTTTCTG
TTCCAGCTTTGAGCTTCCAGTTTCCTCAAGAAAAGAGAGATTTTGTTGAT
TCCCTCCGACAATGAGCTCCGTTGGCAATTTCCTTATAAAATTTTTCCAT
CATGGATGCTCCTCTTAACAGATCATGATATCATATGTACGATTCCATCA
GCTATCATCACTCTGTTCTCATCTTGCAGTTTCTCTAATAGGAATGTTAT
CTCTGCCCTTGAATAATGGGCATCCATTCCAGTGTTGACAATTTCCTCTA
GCTCTGTAATGGTTATCAAATCCAAGCGATTTGCCCTCATATGTTGACCA
AATACTGAATTAAAAGCTTCCATTCTTTGAGGAGAGACATTCACACCGGA
TACAGCTGCTGGAGGTTCGTCTACATCCATGGAACGTTCATTATCATTAG
TGCTGTGGTCTGCTCTATCATTTCCGCCAGGGTGCTCAGCCCTTGGATTT
TTCTCTTGTTCTCTCTGCCTTTCCTGTTCGCGCTCCTCCATCTCAGTTAA
TTCTTTGTGATATATTGCAAAATTTAGAGCTTTTAGAGCAGCTTCAACAT
CAGACTTTGAAATCTTCCTGTTCAACTTCATTTTGGCATGAGCAGTTGAG
AGACGTATTATGGTTTCTAGTGTTCTGGCTGTAATAGGAAGCGTTCCTCC
AGTCTTTGCATTTGAACTGCTATTTCTGAGTTCTGCATATGCTGTTGCAA
TTTGTTC
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