EY665296

Overview
NameEY665296
Unique NameEY665296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665296_ssr108 microsatellite EY665296_ssr108:108..119. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.078e-47
Identity = 70/113 (61.95%), Postives = 90/113 (79.65%), Query Frame = 3
Query:   84 ATKSSRGSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTLR 422
            +T +   S LPSDLC +FS+ EI++ATN+F+  L+IGVGGFG+VYKG I+G  T VA+KRLE  S QGA EF TE+ MLS+LRH+HLVSLIGYC+D  EM+LVY++M  GTL+
Sbjct:  496 STNTKSASSLPSDLCRRFSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLK 608          

HSP 2 Score: 65.4698 bits (158), Expect = 1.078e-47
Identity = 43/91 (47.25%), Postives = 52/91 (57.14%), Query Frame = 1
Query:  412 GLYVDHLYRSD---NPPLPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGK-WKTTNILLEKKGGAKVSQFEPPQFGTTSGPKTSGEYGCKG 672
            G   DHL+R D   +PPL W +RLEICIGA RG  YL  G    Y+ I +  KTTNILL++   AKVS F   + G TS  +T      KG
Sbjct:  605 GTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAK--YTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKG 693          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 3.375e-46
Identity = 67/113 (59.29%), Postives = 91/113 (80.53%), Query Frame = 3
Query:   84 ATKSSRGSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTLR 422
            +T +     LP+DLC +FS+ EI++ATN+F++ L+IGVGGFG+VYKG I+G  T VA+KRLE  S QGA EF+TE+ MLS+LRH+HLVSLIGYC++  EM+LVY++M  GTL+
Sbjct:  489 STNTKPAKSLPADLCRRFSIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLK 601          

HSP 2 Score: 63.929 bits (154), Expect = 3.375e-46
Identity = 42/91 (46.15%), Postives = 51/91 (56.04%), Query Frame = 1
Query:  412 GLYVDHLYRSD---NPPLPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGK-WKTTNILLEKKGGAKVSQFEPPQFGTTSGPKTSGEYGCKG 672
            G   DHL+R D   +PPL W +RLEICIGA RG  YL  G    Y+ I +  KTTNILL++    KVS F   + G TS  +T      KG
Sbjct:  598 GTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAK--YTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKG 686          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 3.572e-42
Identity = 80/147 (54.42%), Postives = 98/147 (66.67%), Query Frame = 3
Query:    9 RKVKDSGSRTGTSLLGTFFSSKTIKATKS---------SRGSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTLR 422
            RK K SGS + TS     + +    ATKS         S  S L + LC +FSLSEI+  T+NFD   VIGVGGFG VYKG I+G T  VAIK+  P S+QG  EF+TEI +LS+LRH HLVSLIGYC++G EM L+YD+M+ GTLR
Sbjct:  458 RKRKFSGSDSHTSSWLPIYGNSHTSATKSTISGKSNNGSHLSNLAAGLCRRFSLSEIKHGTHNFDESNVIGVGGFGKVYKGVIDGGTK-VAIKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLR 603          

HSP 2 Score: 54.6842 bits (130), Expect = 3.572e-42
Identity = 33/68 (48.53%), Postives = 41/68 (60.29%), Query Frame = 1
Query:  409 VGLYVDHLYRSDNPPLPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGK-WKTTNILLEKKGGAKVSQF 609
            +G   +HLY +  P L W +RLEI IGA RG  YL  G    Y+ I +  KTTNILL++   AKVS F
Sbjct:  599 LGTLREHLYNTKRPQLTWKRRLEIAIGAARGLHYLHTGAK--YTIIHRDVKTTNILLDENWVAKVSDF 664          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.452e-40
Identity = 73/125 (58.40%), Postives = 91/125 (72.80%), Query Frame = 3
Query:   57 TFFSSKTIKATKSSRGSFLPS---DLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTLR 422
            T   +K+  + KS+ GS L +    LC +FSL EI+  T NFD+  VIGVGGFG VYKG I+G TT VA+K+  P S+QG  EF+TEI +LS+LRH HLVSLIGYC++G EM LVYD+MA GTLR
Sbjct:  476 TTSGTKSTISGKSNNGSHLSNLAAGLCRRFSLPEIKHGTQNFDDSNVIGVGGFGKVYKGVIDG-TTKVAVKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYMAFGTLR 599          

HSP 2 Score: 53.1434 bits (126), Expect = 1.452e-40
Identity = 32/67 (47.76%), Postives = 40/67 (59.70%), Query Frame = 1
Query:  412 GLYVDHLYRSDNPPLPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGK-WKTTNILLEKKGGAKVSQF 609
            G   +HLY +  P L W +RLEI IGA RG  YL  G    Y+ I +  KTTNIL+++   AKVS F
Sbjct:  596 GTLREHLYNTKKPQLTWKRRLEIAIGAARGLHYLHTGAK--YTIIHRDVKTTNILVDENWVAKVSDF 660          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.882e-38
Identity = 68/121 (56.20%), Postives = 86/121 (71.07%), Query Frame = 3
Query:   66 SSKTIKATKSSR--GSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTLR 422
            S+   KAT  S    +   S +  +F+L+EI+AAT NFD+ L IGVGGFG VY+G +   T  +AIKR  P SQQG  EF+TEI MLS+LRH HLVSLIG+C++  EMILVY++MA GTLR
Sbjct:  483 STANAKATGGSLRLNTLAASTMGRKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGTL-IAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLR 602          

HSP 2 Score: 54.6842 bits (130), Expect = 2.882e-38
Identity = 33/67 (49.25%), Postives = 40/67 (59.70%), Query Frame = 1
Query:  412 GLYVDHLYRSDNPPLPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGK-WKTTNILLEKKGGAKVSQF 609
            G    HL+ S+ PPL W QRLE CIG+ RG  YL  G  R    I +  KTTNILL++   AK+S F
Sbjct:  599 GTLRSHLFGSNLPPLSWKQRLEACIGSARGLHYLHTGSER--GIIHRDVKTTNILLDENFVAKMSDF 663          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.965e-37
Identity = 69/122 (56.56%), Postives = 82/122 (67.21%), Query Frame = 3
Query:   57 TFFSSKTIKATKSSRGSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTLR 422
            TF +SKT     +   S L   L   FSLSE+Q  T NFD   +IGVGGFGNVY G I+  T  VAIKR  P+S+QG  EF TEI MLS+LRH HLVSLIGYC++  EMILVY++M+ G  R
Sbjct:  489 TFMTSKTGSHKSNLYNSAL--GLGRYFSLSELQEVTKNFDASEIIGVGGFGNVYIGTIDDGTQ-VAIKRGNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFR 607          

HSP 2 Score: 53.9138 bits (128), Expect = 8.965e-37
Identity = 33/66 (50.00%), Postives = 39/66 (59.09%), Query Frame = 1
Query:  412 GLYVDHLYRSDNPPLPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGKWKTTNILLEKKGGAKVSQF 609
            G + DHLY  +  PL W QRLEICIGA RG  YL  G T         K+TNILL++   AKV+ F
Sbjct:  604 GPFRDHLYGKNLSPLTWKQRLEICIGAARGLHYLHTG-TAQGIIHRDVKSTNILLDEALVAKVADF 668          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.981e-36
Identity = 68/122 (55.74%), Postives = 83/122 (68.03%), Query Frame = 3
Query:   57 TFFSSKTIKATKSSRGSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTLR 422
            TF +SK      +   S L   L   FSLSE+Q AT NF+   +IGVGGFGNVY G ++  T  VA+KR  P+S+QG  EFQTEI MLS+LRH HLVSLIGYC++  EMILVY+FM+ G  R
Sbjct:  490 TFMTSKGGSQKSNFYNSTL--GLGRYFSLSELQEATKNFEASQIIGVGGFGNVYIGTLDDGTK-VAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFR 608          

HSP 2 Score: 52.7582 bits (125), Expect = 1.981e-36
Identity = 32/66 (48.48%), Postives = 39/66 (59.09%), Query Frame = 1
Query:  412 GLYVDHLYRSDNPPLPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGKWKTTNILLEKKGGAKVSQF 609
            G + DHLY  +  PL W QRLEICIG+ RG  YL  G T         K+TNILL++   AKV+ F
Sbjct:  605 GPFRDHLYGKNLAPLTWKQRLEICIGSARGLHYLHTG-TAQGIIHRDVKSTNILLDEALVAKVADF 669          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.046e-35
Identity = 88/181 (48.62%), Postives = 107/181 (59.12%), Query Frame = 3
Query:   45 SLLGTFFSSKTIKA-TKSSRGSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTLRGXXXXXXXXXXXXXXKA*NLHWCTSWASLFATGANQAVFIHREVENNQHLVGKK 584
            SL G   S+ + K  T  S  S LPS+LC  FS +EI+AAT NFD   V+GVGGFG VY+G I+G TT VAIKR  P S+QG  EFQTEI MLS+LRH HLVSLIGYC +  EMILVYD+MA GT+R               +               TGA   + IHR+V+    L+ +K
Sbjct:  493 SLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATKNFDESRVLGVGGFGKVYRGEIDGGTTKVAIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNPSLPWKQRLEICIGAARGLHYLHTGAKHTI-IHRDVKTTNILLDEK 672          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.162e-35
Identity = 57/105 (54.29%), Postives = 78/105 (74.29%), Query Frame = 3
Query:  108 FLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTLR 422
            F  S +  ++ L+ I+ AT++FD  LVIGVGGFG VYKG +   T  VA+KR  P+S+QG  EF+TE+ ML+Q RH HLVSLIGYC++  EMI+VY++M +GTL+
Sbjct:  466 FSSSKIGYRYPLALIKEATDDFDESLVIGVGGFGKVYKGVLRDKTE-VAVKRGAPQSRQGLAEFKTEVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLK 569          

HSP 2 Score: 53.5286 bits (127), Expect = 6.162e-35
Identity = 33/67 (49.25%), Postives = 38/67 (56.72%), Query Frame = 1
Query:  412 GLYVDHLYRSDNPP-LPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGKWKTTNILLEKKGGAKVSQF 609
            G   DHLY  D+ P L W QRLEIC+GA RG  YL  G TR        K+ NILL+    AKV+ F
Sbjct:  566 GTLKDHLYDLDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAI-IHRDVKSANILLDDNFMAKVADF 631          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.361e-34
Identity = 62/131 (47.33%), Postives = 84/131 (64.12%), Query Frame = 3
Query:   30 SRTGTSLLGTFFSSKTIKATKSSRGSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTLR 422
            S  GTS+   + +  T+ +  ++    +P         + ++ ATNNFD    IGVGGFG VYKG +N  T  VA+KR  P+SQQG  EF+TEI MLSQ RH HLVSLIGYC++  EMIL+Y++M  GT++
Sbjct:  446 SINGTSMGSKYSNGTTLTSITTNANYRIP--------FAAVKDATNNFDESRNIGVGGFGKVYKGELNDGTK-VAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVK 567          

HSP 2 Score: 51.9878 bits (123), Expect = 1.361e-34
Identity = 31/68 (45.59%), Postives = 40/68 (58.82%), Query Frame = 1
Query:  412 GLYVDHLYRSDNPPLPWNQRLEICIGAPRGPPYLLLGQTR--LYSFIGKWKTTNILLEKKGGAKVSQF 609
            G    HLY S  P L W QRLEICIGA RG  YL  G ++  ++  +   K+ NILL++   AKV+ F
Sbjct:  564 GTVKSHLYGSGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDV---KSANILLDENFMAKVADF 628          
The following BLAST results are available for this feature:
BLAST of EY665296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
Y5389_ARATH1.078e-4761.95Probable receptor-like protein kinase At5g38990 OS... [more]
Y5900_ARATH3.375e-4659.29Putative receptor-like protein kinase At5g39000 OS... [more]
ANX2_ARATH3.572e-4254.42Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
ANX1_ARATH1.452e-4058.40Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
Y1357_ARATH2.882e-3856.20Probable receptor-like protein kinase At1g30570 OS... [more]
Y2214_ARATH8.965e-3756.56Probable receptor-like protein kinase At2g21480 OS... [more]
Y4391_ARATH1.981e-3655.74Probable receptor-like protein kinase At4g39110 OS... [more]
FERON_ARATH2.046e-3548.62Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
Y2393_ARATH6.162e-3554.29Probable receptor-like protein kinase At2g39360 OS... [more]
HERK_ARATH1.361e-3447.33Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-C08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665296 ID=EY665296; Name=EY665296; organism=Citrus sinensis; type=EST; length=932bp
CACGCGTCCGGAAAGTCAAGGACTCGGGTTCCCGTACAGGTACTTCACTT
TTGGGGACTTTTTTTTCTTCTAAGACTATCAAGGCAACCAAGTCATCACG
CGGCTCATTCCTTCCTTCCGATCTTTGTACCCAATTTTCACTATCTGAAA
TCCAAGCGGCTACAAACAACTTCGACAATGATCTCGTAATTGGAGTTGGA
GGGTTTGGTAATGTCTACAAAGGCTTCATCAATGGCAGCACTACCCCTGT
TGCCATTAAACGACTGGAACCAGAGTCGCAACAGGGCGCCCTGGAATTCC
AAACTGAGATAGGAATGCTCTCGCAGCTCCGGCATCTTCACTTAGTCTCT
CTCATCGGCTATTGCAACGATGGCAGGGAGATGATCCTTGTATACGATTT
CATGGCTCGTGGGACTCTACGTGGATCATCTCTACCGTAGCGACAATCCT
CCTCTTCCATGGAATCAAAGGCTTGAAATCTGCATTGGTGCACCTCGTGG
GCCTCCCTATTTGCTACTGGGGCAAACCAGGCTGTATTCATTCATCGGGA
AGTGGAAAACAACCAACATCTTGTTGGAAAAAAAAGGGGGGGCCAAGGTT
TCCCAATTCGAACCCCCCCAATTTGGAACAACTTCCGGGCCCAAAACCTC
TGGGGAGTACGGTTGTAAAGGGGGAGGCGCGGAAAACTAAAAATCCGGAA
AAACAACCCGACTTCCCACAGTTTAATGGGAAAAACCTAGAACCCACACC
CCTTCCGGGGGGTTGGGGTGTGTCGAAAATTATTGGGGGGGCCCCGGCCC
CCCCATTTTCCCGGGGGAAAACACAAAAAAAAAAAAAAAAATAGGAAGGT
TAACAGTTTGTTGGGGGGGGGCACCCAATGGTATTATAATCAAGAGGGAG
AAAAATTTTTTGTAAAAGAAATGTGTTGTAAC
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