CV884529

Overview
NameCV884529
Unique NameCV884529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9868 contig Csv1_Contig9868:44..933. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884529 vs. ExPASy Swiss-Prot
Match: ACLY_RAT (ATP-citrate synthase OS=Rattus norvegicus GN=Acly PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.060e-33
Identity = 94/271 (34.69%), Postives = 134/271 (49.45%), Query Frame = 3
Query:   87 MARKKIREYDSKRLLKEHFQRLSGRELPIKSAQVIESTNFDELAQKEPWLTSCKLVVKPDMLFGKRGKSGLVALNLDLAQAATFVKECLGKEMEMSECKGXXXXXXXXXXXXHN--EEFYLNIVSERLGCSVSFSECGGIEIEENWDKVKTIFVPTGACL-ASETSAPLVATLPLEIRGEIQEFIKSVXXXXXXXXXXXXEMNPFTLVDRKPYPLDMRGELDDTAAFKNFKKWGNIEFPLPFGRAMSATESFIHDLDEKTSASLKFTVLNP 890
            M+ K I E   K LL ++    S  +   K A+V   T++  L Q  PWL S  LVVKPD L  +RGK GLV +NL L    +++K  LG E  + + KG            H+  EEFY+ I + R G  V F   GG+++ +   K + + V     L A +    L+   P + +  +  FI  +            E+NP  +     Y LD+  ++D TA +    KWG+IEFP PFGR     E++I DLD K+ ASLK T+LNP
Sbjct:    1 MSAKAISEQTGKELLYKYICTTSAIQNRFKYARVTPDTDWAHLLQDHPWLLSQSLVVKPDQLIKRRGKLGLVGVNLSLDGVKSWLKPRLGHEATVGKAKGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFHHEGGVDVGDVDTKAQKLLVGVDEKLNAEDIKRHLLVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNP 271          
BLAST of CV884529 vs. ExPASy Swiss-Prot
Match: ACLY_MOUSE (ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.220e-33
Identity = 94/271 (34.69%), Postives = 134/271 (49.45%), Query Frame = 3
Query:   87 MARKKIREYDSKRLLKEHFQRLSGRELPIKSAQVIESTNFDELAQKEPWLTSCKLVVKPDMLFGKRGKSGLVALNLDLAQAATFVKECLGKEMEMSECKGXXXXXXXXXXXXHN--EEFYLNIVSERLGCSVSFSECGGIEIEENWDKVKTIFVPTGACLASET-SAPLVATLPLEIRGEIQEFIKSVXXXXXXXXXXXXEMNPFTLVDRKPYPLDMRGELDDTAAFKNFKKWGNIEFPLPFGRAMSATESFIHDLDEKTSASLKFTVLNP 890
            M+ K I E   K LL ++    S  +   K A+V   T++  L Q  PWL S  LVVKPD L  +RGK GLV +NL L    +++K  LG E  + + KG            H+  EEFY+ I + R G  V F   GG+++ +   K + + V     L +E     L+   P + +  +  FI  +            E+NP  +     Y LD+  ++D TA +    KWG+IEFP PFGR     E++I DLD K+ ASLK T+LNP
Sbjct:    1 MSAKAISEQTGKELLYKYICTTSAIQNRFKYARVTPDTDWAHLLQDHPWLLSQSLVVKPDQLIKRRGKLGLVGVNLSLDGVKSWLKPRLGHEATVGKAKGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNTEDIKRHLLVHAPEDKKEVLASFISGLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNP 271          
BLAST of CV884529 vs. ExPASy Swiss-Prot
Match: ACLY_SHEEP (ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.419e-32
Identity = 93/271 (34.32%), Postives = 132/271 (48.71%), Query Frame = 3
Query:   87 MARKKIREYDSKRLLKEHFQRLSGRELPIKSAQVIESTNFDELAQKEPWLTSCKLVVKPDMLFGKRGKSGLVALNLDLAQAATFVKECLGKEMEMSECKGXXXXXXXXXXXXHN--EEFYLNIVSERLGCSVSFSECGGIEIEENWDKVKTIFVPTGACLASET-SAPLVATLPLEIRGEIQEFIKSVXXXXXXXXXXXXEMNPFTLVDRKPYPLDMRGELDDTAAFKNFKKWGNIEFPLPFGRAMSATESFIHDLDEKTSASLKFTVLNP 890
            M+ K I E   K LL ++    S  +   K A+V   T++  L Q  PWL S  LVVKPD L  +RGK GLV +NL L    +++K  LG+E  + +  G            H   EEFY+ I + R G  V F   GG+++ +   K + + V     L  E     L+   P + +  +  FI  +            E+NP  +     Y LD+  ++D TA +    KWG+IEFP PFGR     E++I DLD K+ ASLK T+LNP
Sbjct:    1 MSAKAISEQTGKELLYKYICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQSLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHTQEEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVAVDEKLNPEDIKKHLLVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNP 271          
BLAST of CV884529 vs. ExPASy Swiss-Prot
Match: ACLY_BOVIN (ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.771e-32
Identity = 92/271 (33.95%), Postives = 132/271 (48.71%), Query Frame = 3
Query:   87 MARKKIREYDSKRLLKEHFQRLSGRELPIKSAQVIESTNFDELAQKEPWLTSCKLVVKPDMLFGKRGKSGLVALNLDLAQAATFVKECLGKEMEMSECKGXXXXXXXXXXXXHN--EEFYLNIVSERLGCSVSFSECGGIEIEENWDKVKTIFVPTGACLASET-SAPLVATLPLEIRGEIQEFIKSVXXXXXXXXXXXXEMNPFTLVDRKPYPLDMRGELDDTAAFKNFKKWGNIEFPLPFGRAMSATESFIHDLDEKTSASLKFTVLNP 890
            M+ K I E   K LL ++    S  +   K A+V   T++  L Q  PWL S  LVVKPD L  +RGK GL+ +NL L    +++K  LG+E  + +  G            H   EEFY+ I + R G  V F   GG+++ +   K + + V     L  E     L+   P + +  +  FI  +            E+NP  +     Y LD+  ++D TA +    KWG+IEFP PFGR     E++I DLD K+ ASLK T+LNP
Sbjct:    1 MSAKAISEQTGKELLYKYICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQSLVVKPDQLIKRRGKLGLIGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHTQEEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNP 271          
BLAST of CV884529 vs. ExPASy Swiss-Prot
Match: ACLY_HUMAN (ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 7.537e-32
Identity = 93/271 (34.32%), Postives = 132/271 (48.71%), Query Frame = 3
Query:   87 MARKKIREYDSKRLLKEHFQRLSGRELPIKSAQVIESTNFDELAQKEPWLTSCKLVVKPDMLFGKRGKSGLVALNLDLAQAATFVKECLGKEMEMSECKGXXXXXXXXXXXXHN--EEFYLNIVSERLGCSVSFSECGGIEIEENWDKVKTIFVPTGACLASET-SAPLVATLPLEIRGEIQEFIKSVXXXXXXXXXXXXEMNPFTLVDRKPYPLDMRGELDDTAAFKNFKKWGNIEFPLPFGRAMSATESFIHDLDEKTSASLKFTVLNP 890
            M+ K I E   K LL +     S  +   K A+V   T++  L Q  PWL S  LVVKPD L  +RGK GLV +NL L    +++K  LG+E  + +  G            H+  EEFY+ I + R G  V F   GG+++ +   K + + V     L  E     L+   P + +  +  FI  +            E+NP  +     Y LD+  ++D TA +    KWG+IEFP PFGR     E++I DLD K+ ASLK T+LNP
Sbjct:    1 MSAKAISEQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNP 271          
BLAST of CV884529 vs. ExPASy Swiss-Prot
Match: ACLY_CAEEL (Probable ATP-citrate synthase OS=Caenorhabditis elegans GN=D1005.1 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.535e-27
Identity = 88/283 (31.10%), Postives = 134/283 (47.35%), Query Frame = 3
Query:   87 MARKKIREYDSKRLLKEHFQRLSGRELPIKSAQVIESTNFDELAQKEPWLT-SCKLVVKPDMLFGKRGKSGLVALNLDLAQAATFVKECLGKEMEMSECKGXXXXXXXXXXXXHNE--EFYLNIVSERLGCSVSFSECGGIEIEENWDKVKTIFVPTGACLASETSAPLVATL---PLEIRGEIQEFIKSVXXXXXXXXXXXXEMNPFTLVDRKPYPLDMRGELDDTAAFKNFKKW----------GNIEFPLPFGRAMSATESFIHDLDEKTSASLKFTVLN 887
            M+ K + E   K +L ++F+  SG      +  V    NFDE+A K  WL    K V+KPD L  +RGK GLV +       A F K      + + + +G            H E  E Y+ I SER    + F E GG++I +  +K +T+ VP      + T +    T    PL+    ++ F+  +            E+NPF L++ + + LD+   LD+TA F    KW           ++EFP PFGR +++ E +I ++D KT ASLK T+LN
Sbjct:    1 MSAKAVSELSGKEVLYKYFEP-SGLLSAPHAFHVKAGENFDEIANKYEWLARDNKGVIKPDQLIKRRGKLGLVKIGTPQELKAWFEKTG-DSYVRVGQTEGRLHTFIVEPFCAHTEKDEMYIAIYSERFRDVIMFYEQGGVDIGDVEEKARTVSVPVQLNENAMTPSDEELTTLLGPLKDSDIVRRFVVELYKAYKDLHFTYLEINPFVLLNNQIHVLDLAARLDETANFLCADKWKSRLTPYGGPNHVEFPAPFGRDLTSEEQYISEMDAKTGASLKLTILN 281          
BLAST of CV884529 vs. ExPASy Swiss-Prot
Match: ACL2_SCHPO (Probable ATP-citrate synthase subunit 2 OS=Schizosaccharomyces pombe GN=SPAC22A12.16 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.180e-26
Identity = 91/330 (27.58%), Postives = 144/330 (43.64%), Query Frame = 3
Query:   87 MARKKIREYDSKRLL-----------KEHFQRLSGR--------ELPIKSAQV-IESTNFDELA--------QKEPWLTSCKLVVKPDMLFGKRGKSGLVALNLDLAQAATFVKECLGKEMEMSECKGXXXXXXXXXXXXH--NEEFYLNIVSERLGCSVSFSECGGIEIEENWDKVKTIFVPTGAC---LASETSAPLVATLPLEIRGEIQEFIKSVXXXXXXXXXXXXEMNPFTLVDRKP----YPLDMRGELDDTAAFKNFKKWG--------------------------NIEFPLPFGRAMSATESFIHDLDEKTSASLKFTVLN 887
            M+ K IREYD K +L           KE ++ +S          + P+ +  +  EST + E+         Q+ PW+   KLV KPD L  +RGKSGL+ LN    +A  +++E  GK  ++    G            H  N E+Y+NI S R G  + F   GG+++ +   K + + VP         +  ++ L++ +P+E    + +FI  +            E+NP  ++        + LD+  +LD TA F+   KW                            + FP PFGR +S  E+++  LD KT ASLK T+LN
Sbjct:    1 MSAKSIREYDGKAVLAYWLNRSPSISKEEYKTVSATPAVQLAQIQFPLPTLVIPAESTTYREVVEDVFAKVEQEHPWVKETKLVAKPDQLIKRRGKSGLLKLNATWDEAKEWIRERAGKNQKVQHAVGYLTTFLVEPFVPHPPNTEYYININSVREGDWILFCNEGGVDVGDVDAKARKLLVPVRLSEFPSRATIASTLLSDIPVEQHESLVDFIIRLYSVYVDCQFTYLEINPLVVIPTAKGADVFYLDLAAKLDQTAEFECGAKWAVARAPESLGIKTSGEESGAINADHGPPMVFPAPFGRELSKEEAYVQGLDAKTGASLKLTILN 330          
The following BLAST results are available for this feature:
BLAST of CV884529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ACLY_RAT3.060e-3334.69ATP-citrate synthase OS=Rattus norvegicus GN=Acly ... [more]
ACLY_MOUSE5.220e-3334.69ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 ... [more]
ACLY_SHEEP4.419e-3234.32ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV... [more]
ACLY_BOVIN5.771e-3233.95ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV... [more]
ACLY_HUMAN7.537e-3234.32ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 ... [more]
ACLY_CAEEL9.535e-2731.10Probable ATP-citrate synthase OS=Caenorhabditis el... [more]
ACL2_SCHPO6.180e-2627.58Probable ATP-citrate synthase subunit 2 OS=Schizos... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884529 ID=CV884529; Name=CV884529; organism=Citrus sinensis; type=EST; length=890bp
GACGCTCAGAAAAATATATCTGTTGCGCTGTCGTTTTTGCCTATTTTCGA
AAGACTTGTCGTTTTGGTGAAAATCAGGCCTGAGAAATGGCACGCAAGAA
GATCAGAGAGTATGATTCGAAGAGATTGTTGAAGGAGCACTTCCAGAGGC
TCTCTGGTCGCGAGTTGCCTATCAAATCCGCACAAGTTATCGAGTCAACT
AATTTCGATGAGCTGGCACAAAAGGAACCCTGGCTTACATCATGTAAACT
AGTTGTGAAACCCGACATGTTGTTTGGAAAGCGTGGGAAGAGTGGTTTGG
TTGCTTTAAATCTGGATTTAGCTCAAGCTGCTACTTTTGTGAAAGAGTGC
CTTGGGAAAGAGATGGAGATGAGTGAATGTAAAGGACCCATAACAACATT
CATCATTGAACCTTTCATCCCGCACAATGAGGAGTTTTACCTTAATATTG
TCTCAGAGCGACTTGGATGCAGCGTAAGCTTTTCAGAATGCGGAGGAATT
GAAATTGAGGAGAACTGGGATAAGGTTAAGACTATCTTTGTCCCAACAGG
TGCATGCCTTGCTTCTGAAACCTCGGCTCCGCTTGTTGCTACTCTTCCCT
TGGAGATCAGAGGAGAAATTCAGGAGTTCATTAAATCAGTTTTCACTCTT
TTTCAAGATCTTGACTTCACTTTCCTTGAGATGAATCCTTTTACATTGGT
TGATAGAAAGCCTTATCCATTGGATATGAGAGGAGAGCTGGATGACACTG
CTGCTTTCAAGAACTTCAAAAAGTGGGGCAATATTGAATTTCCCTTGCCG
TTTGGAAGAGCAATGAGTGCTACAGAAAGCTTTATACATGATCTAGATGA
AAAGACAAGTGCATCTTTGAAATTCACAGTTTTGAACCCA
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