CV884528

Overview
NameCV884528
Unique NameCV884528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11205 contig Csv1_Contig11205:366..1068. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884528 vs. ExPASy Swiss-Prot
Match: VSR2_ARATH (Vacuolar-sorting receptor 2 OS=Arabidopsis thaliana GN=VSR2 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.008e-44
Identity = 77/142 (54.23%), Postives = 101/142 (71.13%), Query Frame = -1
Query:  278 WKKIQDGKSFFACVENSLHGCKCPPGFRGDGVNTCENVDECEEKLAFQSPECKCKDTWGSYECTCGSGFLYMQEHDPCISKDVRSEASWGFVWMVIFGLAATGVPGYAFSKSRIRRYMDSEIRAIMAQSIPLDSQAEVHHAS 703
            WK+ Q GK++ AC ++   GCKCPPGF GDG+  C++V+ECEEK A Q  +CKCK+TWGSYEC+C    LY++EHD CI++D R + SWG +W++I GL A  +  Y   K RIR YMDSEIRAIMAQ +PLD+      +S
Sbjct:  480 WKQTQMGKTYSACRDDHSKGCKCPPGFIGDGLKECKDVNECEEKTACQCRDCKCKNTWGSYECSCSGSLLYIREHDICINRDARGDFSWGVIWIIIMGLGAAALGAYTVYKYRIRTYMDSEIRAIMAQYMPLDNNPNTQLSS 621          
BLAST of CV884528 vs. ExPASy Swiss-Prot
Match: VSR1_ARATH (Vacuolar-sorting receptor 1 OS=Arabidopsis thaliana GN=VSR1 PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 8.438e-43
Identity = 76/137 (55.47%), Postives = 100/137 (72.99%), Query Frame = -1
Query:  299 WKKIQDGKSFFACVENSLHGCKCPPGFRGDGVNTCENVDECEEKLAFQSPECKCKDTWGSYECTCGSGFLYMQEHDPCI--SKDVRSEASWGFVWMVIFGLAATGVPGYAFSKSRIRRYMDSEIRAIMAQSIPLDSQ 703
            W++ + G ++ ACV++    CKCP GF+GDGV  CE+VDEC+EK   Q PECKCK+TWGSYEC+C +G LYM+EHD CI   K   ++ SW F+W++I G+   G+ GYA  K RIR YMD+EIR IMAQ +PL+SQ
Sbjct:  476 WRESRGGFTYSACVDDHSKDCKCPLGFKGDGVKNCEDVDECKEKTVCQCPECKCKNTWGSYECSCSNGLLYMREHDTCIGSGKVGTTKLSWSFLWILIIGVGVAGLSGYAVYKYRIRSYMDAEIRGIMAQYMPLESQ 612          
BLAST of CV884528 vs. ExPASy Swiss-Prot
Match: VSR4_ARATH (Vacuolar-sorting receptor 4 OS=Arabidopsis thaliana GN=VSR4 PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 2.078e-41
Identity = 74/139 (53.24%), Postives = 98/139 (70.50%), Query Frame = -1
Query:  290 WKKIQDGKSFFACVENSLHGCKCPPGFRGDGVNTCENVDECEEKLAFQSPECKCKDTWGSYECTCGSGFLYMQEHDPCISK-DVRSEASWGFVWMVIFGLAATGVPGYAFSKSRIRRYMDSEIRAIMAQSIPLDSQAEV 703
            W + +DG +F ACV+     C+CPPGF+GDGV  CE+++EC+EK A Q PEC CK+TWGSYEC+C    LYM++HD CISK   + +++W  VW+++  L       Y   K R+R+YMDSEIRAIMAQ +PLDSQ EV
Sbjct:  481 WHEERDGHAFSACVDKDSVKCECPPGFKGDGVKKCEDINECKEKKACQCPECSCKNTWGSYECSCSGDLLYMRDHDTCISKTGSQVKSAWAAVWLIMLSLGLAAAGAYLVYKYRLRQYMDSEIRAIMAQYMPLDSQPEV 619          
BLAST of CV884528 vs. ExPASy Swiss-Prot
Match: VSR3_ARATH (Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana GN=VSR3 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.759e-40
Identity = 71/139 (51.08%), Postives = 96/139 (69.06%), Query Frame = -1
Query:  290 WKKIQDGKSFFACVENSLHGCKCPPGFRGDGVNTCENVDECEEKLAFQSPECKCKDTWGSYECTCGSGFLYMQEHDPCISK-DVRSEASWGFVWMVIFGLAATGVPGYAFSKSRIRRYMDSEIRAIMAQSIPLDSQAEV 703
            W + +DG +F ACV+     C+CPPGF+GDG   CE+++EC+EK A Q PEC CK+TWGSYEC+C    LY+++HD CISK   +  ++W  VW+++  L       Y   K R+R+YMDSEIRAIMAQ +PLDSQ E+
Sbjct:  481 WHEERDGHAFSACVDKDSVKCECPPGFKGDGTKKCEDINECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKTGAQVRSAWAAVWLIMLSLGLAAAGAYLVYKYRLRQYMDSEIRAIMAQYMPLDSQPEI 619          
BLAST of CV884528 vs. ExPASy Swiss-Prot
Match: VSR1_PEA (Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP80 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.258e-38
Identity = 69/138 (50.00%), Postives = 96/138 (69.57%), Query Frame = -1
Query:  293 WKKIQDGKSFFACVENSLHGCKCPPGFRGDGVNTCENVDECEEKLAFQSPECKCKDTWGSYECTCGSGFLYMQEHDPCISKDV-RSEASWGFVWMVIFGLAATGVPGYAFSKSRIRRYMDSEIRAIMAQSIPLDSQAE 703
            W   ++G +F AC+++    C+CP GF+GDGV  CE++DEC++K A Q PEC CK+TWGSY C+C    LY+++ D CISK   +++++W   W+V+  LA     G+   K RIR+YMDSEIRAIMAQ +PLDSQ E
Sbjct:  476 WHDARNGHAFSACLDDGGVKCQCPAGFKGDGVKNCEDIDECKDKKACQCPECSCKNTWGSYNCSCSGDLLYIKDQDTCISKTASQAKSTWAAFWVVLIALAMIAGGGFLVYKYRIRQYMDSEIRAIMAQYMPLDSQEE 613          
BLAST of CV884528 vs. ExPASy Swiss-Prot
Match: VSR7_ARATH (Vacuolar-sorting receptor 7 OS=Arabidopsis thaliana GN=VSR7 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.264e-30
Identity = 58/135 (42.96%), Postives = 89/135 (65.93%), Query Frame = -1
Query:  299 WKKIQDGKSFFACVENSLHGCKCPPGFRGDGVNTCENVDECEEKLAFQSPECKCKDTWGSYECTCGSGFLYMQEHDPCISKDVRSEASWGFVWMVIFGLAATGVPGYAFSKSRIRRYMDSEIRAIMAQSIPLDSQ 703
            W   ++G +F AC ++   GCKCP GF+GDG+ TCE+++EC+E+   Q   C+CK++WG Y+C+C    LY+ + D CI +   S+ +W   ++++  +A  G+ GY F K R R YMDSEI  IM+Q +PL+SQ
Sbjct:  479 WSDTRNGLTFSACSDSVSTGCKCPEGFQGDGL-TCEDINECKERSVCQCSGCRCKNSWGGYKCSCSGDRLYINDQDTCIER-YGSKTAWWLTFLILAIVAVAGLAGYIFYKYRFRSYMDSEIMTIMSQYMPLESQ 611          
BLAST of CV884528 vs. ExPASy Swiss-Prot
Match: VSR5_ARATH (Vacuolar-sorting receptor 5 OS=Arabidopsis thaliana GN=VSR5 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.272e-30
Identity = 59/136 (43.38%), Postives = 86/136 (63.24%), Query Frame = -1
Query:  296 WKKIQDGKSFFACVENSLHGCKCPPGFRGDGVNTCENVDECEEKLAFQSPECKCKDTWGSYECTCGSGFLYMQEHDPCISKDVRSEASWGFVWMVIFGLAATGVPGYAFSKSRIRRYMDSEIRAIMAQSIPLDSQA 703
            W + + G +F +C ++   GC+CP GF GDG+  CE++DEC+EK A +   CKCK+ WG YEC C +  +YM+E D CI +   S +   F  +V+  +A   +  Y F K  ++ YMDSEI +IM+Q IPLDSQ+
Sbjct:  477 WSETRKGLTFSSCSDSETSGCRCPLGFLGDGLK-CEDIDECKEKSACKCDGCKCKNNWGGYECKCSNNSIYMKEEDTCIERRSGSRSRGLFTIVVLTAIAGISLGAYIFYKYHLQSYMDSEIVSIMSQYIPLDSQS 611          
BLAST of CV884528 vs. ExPASy Swiss-Prot
Match: VSR6_ARATH (Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana GN=VSR6 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 9.373e-26
Identity = 58/135 (42.96%), Postives = 79/135 (58.52%), Query Frame = -1
Query:  299 WKKIQDGKSFFACVENSLHGCKCPPGFRGDGVNTCENVDECEEKLAFQSPECKCKDTWGSYECTCGSGFLYMQEHDPCISKDVRSEASWGFVWMVIFGLAATGVPGYAFSKSRIRRYMDSEIRAIMAQSIPLDSQ 703
            W + + G +F AC      GC+CPPGF+GDG+       +CE   A Q   C CK+ WG +EC C    LYM+E D CI +   S   W   ++++  +A+  V GY F K R+R YMDSEI AIM+Q +PL+SQ
Sbjct:  478 WSETKKGLTFSACSNLETSGCRCPPGFKGDGL-------KCE---ACQCDGCNCKNKWGGFECKCSGNRLYMKEQDTCIERS-GSRIGWFPTFVILAAVASICVGGYVFYKYRLRSYMDSEIMAIMSQYMPLESQ 601          
The following BLAST results are available for this feature:
BLAST of CV884528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
VSR2_ARATH2.008e-4454.23Vacuolar-sorting receptor 2 OS=Arabidopsis thalian... [more]
VSR1_ARATH8.438e-4355.47Vacuolar-sorting receptor 1 OS=Arabidopsis thalian... [more]
VSR4_ARATH2.078e-4153.24Vacuolar-sorting receptor 4 OS=Arabidopsis thalian... [more]
VSR3_ARATH1.759e-4051.08Vacuolar-sorting receptor 3 OS=Arabidopsis thalian... [more]
VSR1_PEA6.258e-3850.00Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP... [more]
VSR7_ARATH1.264e-3042.96Vacuolar-sorting receptor 7 OS=Arabidopsis thalian... [more]
VSR5_ARATH6.272e-3043.38Vacuolar-sorting receptor 5 OS=Arabidopsis thalian... [more]
VSR6_ARATH9.373e-2642.96Vacuolar-sorting receptor 6 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884528 ID=CV884528; Name=CV884528; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTTTTTTTTTTTTAAAACATTAAAACTGGTTCCATTCAATGAAAAA
TTGACTGGGCTGCTGGGCATTTATGTGCGTCGGTTATAATTTAAATAATT
TACAAATAAACTAACTCCCCTCCCAGTAAATTGTAACGCTAACCGAGCAT
ATAAGCCAGGGAATAAATTAAACATTACCCCCCATAGTATCAGTAAGATG
GGGATAGAGCATTATGTTCTTCTGAAATTGTCCCCTTCTTTCTGGGCCGA
AGGGCCCTGCTCTTAAACATCACCGGGGGAAGCATGGTGAACCTCTGCTT
GACTATCCAATGGGATGGACTGGGCCATGATGGCCCGTATCTCTGAATCC
ATATATCTCCGGATTCTGGACTTGGAAAATGCATATCCTGGAACGCCAGT
AGCTGCTAAGCCAAAAATGACCATCCATACAAAGCCCCAGCTAGCCTCCG
ATCTAACATCTTTGCTTATGCAGGGGTCATGCTCTTGCATGTACAAAAAT
CCACTGCCACAGGTGCACTCGTAACTGCCCCATGTATCTTTGCATTTGCA
CTCTGGGGATTGAAATGCCAGTTTTTCTTCGCACTCATCCACATTTTCAC
AGGTGTTGACTCCATCCCCCCTAAATCCAGGGGGACACTTGCAACCATGC
AAGCTATTCTCAACACAAGCAAAAAAAGATTTGCCATCTTGGATTTTCTT
CCA
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