CV884527

Overview
NameCV884527
Unique NameCV884527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11205 contig Csv1_Contig11205:616..1292. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884527 vs. ExPASy Swiss-Prot
Match: VSR1_ARATH (Vacuolar-sorting receptor 1 OS=Arabidopsis thaliana GN=VSR1 PE=1 SV=2)

HSP 1 Score: 356.295 bits (913), Expect = 8.496e-98
Identity = 154/222 (69.37%), Postives = 184/222 (82.88%), Query Frame = 3
Query:    3 PAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCI--SKDVRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQAEVQHASHGDV 662
            PAICL+ED+ETNECLENNGGCWQDKAANITAC+DTFRGR+CECP V+GVKFVGDGYTHC+ASGA  C INNGGCW++ + G ++SACV++    CKCP GF+GDGV NCEDVDEC+EK  CQCPECKCK+TWGSYECSC +GLLYM+EHDTCI   K   ++ SW F+W++I+G+   G++GYA YKYRIR YMD+EIR IMAQYMPL+SQ       H D+
Sbjct:  402 PAICLTEDLETNECLENNGGCWQDKAANITACRDTFRGRLCECPTVQGVKFVGDGYTHCKASGALHCGINNGGCWRESRGGFTYSACVDDHSKDCKCPLGFKGDGVKNCEDVDECKEKTVCQCPECKCKNTWGSYECSCSNGLLYMREHDTCIGSGKVGTTKLSWSFLWILIIGVGVAGLSGYAVYKYRIRSYMDAEIRGIMAQYMPLESQPPNTSGHHMDI 623          
BLAST of CV884527 vs. ExPASy Swiss-Prot
Match: VSR2_ARATH (Vacuolar-sorting receptor 2 OS=Arabidopsis thaliana GN=VSR2 PE=2 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.449e-97
Identity = 150/216 (69.44%), Postives = 179/216 (82.87%), Query Frame = 3
Query:    3 PAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISKDVRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQAEVQHAS 650
            P ICL+EDIETNECL+NNGGCW+DK  NITAC+DTFRGRVC+CPIV+GVKF+GDGYTHCEASGA RC INNGGCWK+ Q GK++SAC ++   GCKCPPGF GDG+  C+DV+ECEEK ACQC +CKCK+TWGSYECSC   LLY++EHD CI++D R + SWG +W++I+GL A  +  Y  YKYRIR YMDSEIRAIMAQYMPLD+    Q +S
Sbjct:  406 PPICLTEDIETNECLQNNGGCWEDKTTNITACRDTFRGRVCQCPIVQGVKFLGDGYTHCEASGALRCGINNGGCWKQTQMGKTYSACRDDHSKGCKCPPGFIGDGLKECKDVNECEEKTACQCRDCKCKNTWGSYECSCSGSLLYIREHDICINRDARGDFSWGVIWIIIMGLGAAALGAYTVYKYRIRTYMDSEIRAIMAQYMPLDNNPNTQLSS 621          
BLAST of CV884527 vs. ExPASy Swiss-Prot
Match: VSR4_ARATH (Vacuolar-sorting receptor 4 OS=Arabidopsis thaliana GN=VSR4 PE=2 SV=2)

HSP 1 Score: 339.732 bits (870), Expect = 8.229e-93
Identity = 146/220 (66.36%), Postives = 178/220 (80.91%), Query Frame = 3
Query:    3 PAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISK-DVRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQAEVQHASHGD 659
            PAICLS D+ETNECL+NNGGCWQDK+ANITACKDTFRG+VC CPIV GV+F GDGY+HCE SG  RC+INNGGCW + +DG +FSACV+     C+CPPGF+GDGV  CED++EC+EK ACQCPEC CK+TWGSYECSC   LLYM++HDTCISK   + +++W  VW+++L L       Y  YKYR+R+YMDSEIRAIMAQYMPLDSQ EV + ++ +
Sbjct:  407 PAICLSTDMETNECLDNNGGCWQDKSANITACKDTFRGKVCVCPIVDGVRFKGDGYSHCEPSGPGRCTINNGGCWHEERDGHAFSACVDKDSVKCECPPGFKGDGVKKCEDINECKEKKACQCPECSCKNTWGSYECSCSGDLLYMRDHDTCISKTGSQVKSAWAAVWLIMLSLGLAAAGAYLVYKYRLRQYMDSEIRAIMAQYMPLDSQPEVPNHTNDE 626          
BLAST of CV884527 vs. ExPASy Swiss-Prot
Match: VSR3_ARATH (Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana GN=VSR3 PE=2 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 5.334e-92
Identity = 143/213 (67.14%), Postives = 172/213 (80.75%), Query Frame = 3
Query:    3 PAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISK-DVRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQAEV 638
            PAICLS D+E+NECL+NNGGCWQDK+ANITACKDTFRGRVCECP V GV+F GDGY+HCE SG  RC+INNGGCW + +DG +FSACV+     C+CPPGF+GDG   CED++EC+EK ACQCPEC CK+TWGSYECSC   LLY+++HDTCISK   +  ++W  VW+++L L       Y  YKYR+R+YMDSEIRAIMAQYMPLDSQ E+
Sbjct:  407 PAICLSTDVESNECLDNNGGCWQDKSANITACKDTFRGRVCECPTVDGVQFKGDGYSHCEPSGPGRCTINNGGCWHEERDGHAFSACVDKDSVKCECPPGFKGDGTKKCEDINECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKTGAQVRSAWAAVWLIMLSLGLAAAGAYLVYKYRLRQYMDSEIRAIMAQYMPLDSQPEI 619          
BLAST of CV884527 vs. ExPASy Swiss-Prot
Match: VSR1_PEA (Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP80 PE=1 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 4.227e-89
Identity = 142/219 (64.84%), Postives = 172/219 (78.54%), Query Frame = 3
Query:    3 PAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISKDV-RSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQAE-VQHASH 653
            PA+CLS D+ETNECL NNGGCWQDK ANI ACKDTFRGRVCECP+V GV+F GDGYT CE SG  RC INNGGCW   ++G +FSAC+++    C+CP GF+GDGV NCED+DEC++K ACQCPEC CK+TWGSY CSC   LLY+++ DTCISK   +++++W   W+V++ LA     G+  YKYRIR+YMDSEIRAIMAQYMPLDSQ E   H +H
Sbjct:  402 PAVCLSNDVETNECLTNNGGCWQDKTANIAACKDTFRGRVCECPLVDGVQFKGDGYTTCEVSGHGRCKINNGGCWHDARNGHAFSACLDDGGVKCQCPAGFKGDGVKNCEDIDECKDKKACQCPECSCKNTWGSYNCSCSGDLLYIKDQDTCISKTASQAKSTWAAFWVVLIALAMIAGGGFLVYKYRIRQYMDSEIRAIMAQYMPLDSQEEGPNHVNH 620          
BLAST of CV884527 vs. ExPASy Swiss-Prot
Match: VSR7_ARATH (Vacuolar-sorting receptor 7 OS=Arabidopsis thaliana GN=VSR7 PE=2 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 2.842e-77
Identity = 121/209 (57.89%), Postives = 160/209 (76.56%), Query Frame = 3
Query:    3 PAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISKDVRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQ 629
            PAICL+  +ETNECLENNGGCWQD  ANITAC+DTFRGR+CECP+V+GV++ GDGYT C   G +RC++NNGGCW   ++G +FSAC ++   GCKCP GF+GDG+  CED++EC+E+  CQC  C+CK++WG Y+CSC    LY+ + DTCI +   S+ +W   ++++  +A  G+AGY FYKYR R YMDSEI  IM+QYMPL+SQ
Sbjct:  405 PAICLNTGLETNECLENNGGCWQDTKANITACQDTFRGRLCECPVVKGVQYKGDGYTSCTPYGPARCTMNNGGCWSDTRNGLTFSACSDSVSTGCKCPEGFQGDGL-TCEDINECKERSVCQCSGCRCKNSWGGYKCSCSGDRLYINDQDTCIER-YGSKTAWWLTFLILAIVAVAGLAGYIFYKYRFRSYMDSEIMTIMSQYMPLESQ 611          
BLAST of CV884527 vs. ExPASy Swiss-Prot
Match: VSR5_ARATH (Vacuolar-sorting receptor 5 OS=Arabidopsis thaliana GN=VSR5 PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 3.474e-75
Identity = 119/210 (56.67%), Postives = 156/210 (74.29%), Query Frame = 3
Query:    3 PAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISKDVRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQA 632
            P+ICL+ DIETNECL  NGGCWQDK +N+TACKDTFRGRVCECP+V GV++ GDGYT C+  G +RCS+NNG CW + + G +FS+C ++   GC+CP GF GDG+  CED+DEC+EK AC+C  CKCK+ WG YEC C +  +YM+E DTCI +   S +   F  +V+  +A   +  Y FYKY ++ YMDSEI +IM+QY+PLDSQ+
Sbjct:  403 PSICLNSDIETNECLIENGGCWQDKRSNVTACKDTFRGRVCECPVVDGVQYKGDGYTSCKPYGPARCSMNNGDCWSETRKGLTFSSCSDSETSGCRCPLGFLGDGL-KCEDIDECKEKSACKCDGCKCKNNWGGYECKCSNNSIYMKEEDTCIERRSGSRSRGLFTIVVLTAIAGISLGAYIFYKYHLQSYMDSEIVSIMSQYIPLDSQS 611          
BLAST of CV884527 vs. ExPASy Swiss-Prot
Match: VSR6_ARATH (Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana GN=VSR6 PE=2 SV=2)

HSP 1 Score: 273.478 bits (698), Expect = 7.243e-73
Identity = 122/209 (58.37%), Postives = 149/209 (71.29%), Query Frame = 3
Query:    3 PAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISKDVRSEASWGFVWMVILGLAATGVAGYAFYKYRIRRYMDSEIRAIMAQYMPLDSQ 629
            P ICLS DIETNECLE NGGCW+DK +N+TACKDTFRGRVCECP+V GV++ GDGYT CE  G +RCSIN GGCW + + G +FSAC      GC+CPPGF+GDG+       +CE   ACQC  C CK+ WG +EC C    LYM+E DTCI +   S   W   ++++  +A+  V GY FYKYR+R YMDSEI AIM+QYMPL+SQ
Sbjct:  404 PGICLSGDIETNECLEANGGCWEDKKSNVTACKDTFRGRVCECPVVNGVQYKGDGYTSCEPYGPARCSINQGGCWSETKKGLTFSACSNLETSGCRCPPGFKGDGL-------KCE---ACQCDGCNCKNKWGGFECKCSGNRLYMKEQDTCIERS-GSRIGWFPTFVILAAVASICVGGYVFYKYRLRSYMDSEIMAIMSQYMPLESQ 601          
The following BLAST results are available for this feature:
BLAST of CV884527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
VSR1_ARATH8.496e-9869.37Vacuolar-sorting receptor 1 OS=Arabidopsis thalian... [more]
VSR2_ARATH1.449e-9769.44Vacuolar-sorting receptor 2 OS=Arabidopsis thalian... [more]
VSR4_ARATH8.229e-9366.36Vacuolar-sorting receptor 4 OS=Arabidopsis thalian... [more]
VSR3_ARATH5.334e-9267.14Vacuolar-sorting receptor 3 OS=Arabidopsis thalian... [more]
VSR1_PEA4.227e-8964.84Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP... [more]
VSR7_ARATH2.842e-7757.89Vacuolar-sorting receptor 7 OS=Arabidopsis thalian... [more]
VSR5_ARATH3.474e-7556.67Vacuolar-sorting receptor 5 OS=Arabidopsis thalian... [more]
VSR6_ARATH7.243e-7358.37Vacuolar-sorting receptor 6 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A08_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884527 ID=CV884527; Name=CV884527; organism=Citrus sinensis; type=EST; length=677bp
AGCCAGCCATATGCTTAAGTGAAGATATTGAAACTAATGAATGCTTAGAA
AACAATGGTGGGTGCTGGCAGGACAAAGCCGCTAACATAACAGCATGCAA
GGATACTTTCCGAGGAAGAGTGTGCGAATGTCCTATAGTACGAGGTGTGA
AGTTTGTTGGTGATGGTTATACTCATTGTGAAGCTTCAGGAGCTTCACGC
TGTTCAATTAATAATGGAGGGTGTTGGAAGAAAATCCAAGATGGCAAATC
TTTTTCTGCTTGTGTTGAGAATAGCTTGCATGGTTGCAAGTGTCCACCTG
GATTTAGGGGTGATGGAGTCAACAACTGTGAAGATGTGGATGAGTGCGAA
GAGAAGCTGGCATGTCAATGCCCAGAGTGCAAATGCAAAGATACATGGGG
CAGTTACGAGTGCAGCTGTGGCAGTGGATTGTTGTACATGCAAGAGCATG
ACACCTGCATAAGCAAAGATGTTAGATCGGAGGCTAGCTGGGGCTTTGTA
TGGATGGTCATTCTTGGCTTAGCAGCTACTGGCGTTGCAGGATATGCATT
TTACAAGTACAGAATCCGGAGATATATGGATTCAGAGATACGGGCCATCA
TGGCACAGTACATGCCATTGGATAGTCAAGCAGAGGTTCAGCATGCTTCC
CACGGTGATGTTTAAGAGCAGGGCCCG
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